TY - JOUR T1 - Discovery of New DNA Topoisomerase II Inhibitors using Structure Based Virtual Screening Method AU - Ertan-bolelli, Tugba AU - Bolelli, Kayhan PY - 2019 DA - May Y2 - 2019 DO - 10.18596/jotcsa.466457 JF - Journal of the Turkish Chemical Society Section A: Chemistry JO - JOTCSA PB - Turkish Chemical Society WT - DergiPark SN - 2149-0120 SP - 71 EP - 78 VL - 6 IS - 1 LA - en AB - DNAtopoisomerases are proved therapeutic targets of anticancer and antibacterialdrugs. Structures oftopoisomerase–DNA and inhibitor ternary complexes have revealed the exactbinding sites and mechanisms of topoisomerase poisons. There are two isoformsof Human Topoisomerase II; α and β. Both of them perform similar functions andtheir levels differ depending on the replicative activity and type of tissue.Topo IIα is preferentially expressed in proliferating cells. Thus selectiveTopo IIα inhibitors have been of particular interest in cancer therapy, as theymay represent a more targeted approach to highly proliferative cells.In thisstudy, we use structure based virtual screening method with molecules which arecommercially available in the ZINC database. Docking studies were performed byGlide module available in Schrödinger software, Ligand filtration was also doneto obtain an efficient collection of hit molecules by employing Lipinski “ruleof five” and pharmacokinetic properties of the compounds were tested usingQikprop module. From approximately ten thousand compounds from Zinc databaseit was possible to select 4 top chemical structures with good inhibitingprofile for topo II, with suitable ADME/Tox properties, thus comp. 1-4 could bethe promising inhibitors of human topo IIα enzyme. KW - anticancer activity KW - docking KW - topoisomerase KW - virtual screening CR - 1. Wang JC. Cellular roles of DNA topoisomerases: A molecular perspective. Nat. 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Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Deliv Rev. 2012, 64(1‑3):4‑17. UR - https://doi.org/10.18596/jotcsa.466457 L1 - https://dergipark.org.tr/en/download/article-file/641993 ER -