Microbial Culture Collections: The Essential Resources for Life

Year 2011, Volume: 24 Issue: 2, 175 - 180, 05.04.2011

Kivilcim Caktu Emir Turkoglu

Abstract

Microbial culture collections are crucial resource centres providing microbial materials. They act as repositories for microbial strains as part of patent deposits, confidential services to store key organisms for research, industry and society and sources of microorganisms cited in scientific papers that can be used in the confirmation of results and for further studies. Microbial culture collections are considered as libraries, but instead of books they hold microorganisms. The first culture collection was established by Prof. Frantisek Král in 1890 at the German University of Prague. After this collection, many culture collections established. Now there are 568 culture collections over the world. These collections categorize as national collections which provide extensive services or small collections which supply strains or related services by special agreement. Microorganisms provide many solutions to world problems in public health, food, environment and poverty and they are extremely important for various ecosystems.

 

Key Words: Microbial Culture Collection, Frantisek Král, Microorganism.

Keywords

Microbial Culture Collection, Frantisek Král, Microorganism

References

• Brenner, D.J., Krieg, N.R., Staley, J.T., Garrity, G.M., “Bergey’s Manual of Systematic Bacteriology 2nd ed.”, Springer, US, 111-112 (2005).
• Sigler, L., “Culture Collections in Canada: Perspectives and Problems”, Can. J. Plant Pathol., 26:39-47 (2004).
• Uruburu, F., “History and services of culture collections”, Int. Microbiol., 6:101-103 (2003).
• Smith, D., “Culture collections over the world”, Int. Microbiol., 6:95-100 (2003).
• Cánovas, M., Iborra, J.L., “Culture collections and biochemisty”, Int. Microbiol., 6:105-112 (2003).
• Waites, M.J., Morgan, N.L., Rockey, J.S. and Higton, G., “Industrial Microbiology: An Introduction 1st ed.”, Blackwell Science, Great Britain, 78-79 (2001).
• Internet: Home Pages of Culture Collections in the World. http://wdcm.nig.ac.jp/hpcc.html (Updated 28 December 2009).
• Internet: Convention on Biological Diversity. http://www.cbd.int/ (Updated 23 December 2009).
• Steck, C.E.,Pautasso, M., “Human population, grasshopper and plant species richness in European countries”, Acta Oecol., 34:303-310 (2008).
• Hawksworth, D.L., “The magnitude of fungal diversity: the 1.5 million species estimate revisited”, Mycol. Res., 105:1422–1432 (2001).
• Demain, A.L., “Small bugs, big business: The economic power of microbe”, Biotechnol. Adv., 18:499-514 (2000).
• Somrutai, W., Takagi, M. and Yoshida, T., “Acetone-Butanol Fermentation by Clostridium aurantibutyricum ATCC 17777 from a Model Medium for Palm Oil Mill Effluent”, J. Ferment. Bioeng., 81(6):543-547 (1996).
• Saude, N., Chèze-Lange, H., Beunard, D., Dhulster, P., Guillochon, D., Cazé, A-M., Morcellet, M. and Junter, G-A., “Alginate production by Azotobacter vinelandii in a membrane bioreactor”, Process Biochem., 38:273-278 (2002).
• Navon, A., “Bacillus thuringiensis insecticides in crop protection - reality and prospects”, Crop Prot., 19:669-676 (2000).
• Zamfir, M., Vancanneyt, M., Makras, L., Vaningelgem, F., Lefebvre, K., Pot, B., Swings, J., Vuyst, L.D., “Biodiversity of lactic acid bacteria in Romanian dairy products”, Syst. Appl. Microbiol., 29:487-495 (2006).
• Sun, Z.H., Liu, S.M., Tayo, G.O., Tang, S.X., Tan, Z.L., Lin, B., He, Z.X., Hang, X.F., Zhou, Z.S., Wang, M., “Effects of cellulase or lactic acid bacteria on silage fermentation and in vitro gas production of several morphological fractions of maize stover”, Anim. Feed Sci. Tech., 152:219-231 (2009).
• Reddy, R.M., Reddy, P.G., Seenayya, G., “Enhanced production of thermostable β-amylase and pullulanase in the presence of surfactants by Clostridium thermosulfurogenes SV2”, Process Biochem., 34:87-92 (1999).
• Kapritchkoff, F.M., Viotti, A.P., Alli, R.C.P., Zuccolo, M., Pradella, J.G.C., Maiorano, A.E.,
• GU J Sci, 24(2):175-180 (2011)/ Kıvılcım ÇAKTÜ, Emir Alper TÜRKOĞLU 179
• Miranda, E.A., Bonomi, A., “Enzymatic recovery
• and purification of polyhydroxybutyrate produced
• by Ralstonia eutropha”, J. Biotechnol., 122:453- 462 (2006).
• Kim, S.O., Lee, Y.I., “High-level expression and simple purification of recombinant human insulin- like growth factor I”, J. Biotechnol., 48:97-105 (1996).
• Li, K-T., Liu, D.H., Li, Y.L., Chu, J., Wang, Y.H., Zhuang, Y.P., Zhang, S.L., “Improved large-scale production of vitamin B12 by Pseudomonas denitrificans with betaine feeding”, Bioresource Technol., 99:8516-8520 (2008).
• Shi, S., Shen, Z., Chen, X., Chen, T., Zhao, X., “Increased production of riboflavin by metabolic engineering of the purine pathway in Bacillus subtilis”, Biochem. Eng. J., 46:28-33 (2009).
• Regodón Mateos, J.A., Pérez-Nevado, F., Fernández, M.R., “Influence of Saccharomyces cerevisiae yeast strain on the major volatile compounds on wine”, Enzyme Microb. Tech., 40(1):151-157 (2006).
• Rajoka, M.I., Khan, S.H., Jabbar, M.A., Awan, M.S., Hashmi, A.S., “Kinetics of batch single cell protein production from rice polishings with Candida utilis in continuously aerated tank reactors”, Bioresource Technol., 97:1934-1941 (2006).
• Choudhari, S., Singhal, R., “Media optimization for the production of β-carotene by Blakeslea trispora: A statistical approach”, Bioresource Technol., 99:722-730 (2008).
• Papagianni, M., Ambrosiadis, I., Filiousis, G., “Mould growth on traditional greek sausages and penicilin production by Penicillium isolates”, Meat Sci., 76:653-657 (2007).
• Murphy, T., Para, R., Ramdan, R., Roy, I., Harrop, A., Dixon, K., Keshavarz, T., “Novel application of oligosaccharides as elicitors for the enhancement of bacitracin A production in cultures of Bacillus licheniformi”, Enzyme Microb. Tech., 40:1518- 1523 (2007).
• Li, M., Huang, D., “On-column refolding purification and characterization of recombinant human interferon-k1 produced in Escherichia coli”, Protein Expres. Purif., 53:119-123 (2007).
• Mitra, S., Chakrabartty, P.K., Biswas, S.R., “Potential production and preservation of dahi by Lactococcus lactis W8, a nisin-producing strain”, LWT - Food Sci. Technol., 43:337- 342 (2010).
• Seo, H-P., Son, C-W., Chung, C.H., Jung, D-I., Kim, S-K., Gross, R.A.., Kaplan, D.L., Lee, J-W., “Production of high molecular weight pullulan by Aureobasidium pullulans HP-2001 with soybean pomace as a nitrogen source”, Bioresource Technol., 95:293- 299 (2004).
• Meanwell, R.J.L., Shama, G., “Production of streptomycin from chitin using Streptomyces griseus in bioreactors of different configuration”, Bioresource Technol., 99:5634- 5639 (2008).
• Zhu, W., Cha, D., Cheng, G., Peng, Q., Shen, P., “Purification and characterization of a thermostable protease from a newly isolated Geobacillus sp. YMTC 1049”, Enzyme Microb. Tech., 40:1592- 1597 (2007).
• Kobayashi, M., Hayashi, S., “Modeling Combined Effects of Temperature and pH on the Growth of Zygosaccharomyces rouxii in Soy Sauce Mash”, J. Ferment. Bioeng., 85(6):638-641 (1998).
• Bremus, C., Herrmann, U., Bringer-Meyer, S., Sahm, H., “The use of microorganisms in l-ascorbic acid production”, J. Biotechnol., 124:196-205 (2006).
• Haarmann, T., Lorenz, N., Tudzynski, P., “Use of a nonhomologous end joining deficient strain (Dku70) of the ergot fungus Claviceps purpurea for identification of a nonribosomal peptide synthetase gene involved in ergotamine biosynthesis”, Fungal Genet. Biol., 45:35-44 (2008).
• Kurosumi, A., Sasaki, C., Yamashita, Y., Nakamura, Y., “Utilization of various fruit juices as carbon source for production of bacterial cellulose by Acetobacter xylinum NBRC 13693”, Carbohyd. Polym., 76:333-335 (2009).
• Wang, Y., Srivastava, K.C., Shen, G.J., Wang, H.Y., “Thermostable Alkaline Lipase from a Newly Isolated Thermophilic Bacillus, Strain A30-1 (ATCC 53841)”, J. Ferment. Bioeng., 79(5):433- 438 (1995).
• Colwell, R.R., ‘‘Microbial diversity: the importance of exploration and conservation’’, J. Ind. Microbiol. Biot., 18:302-307 (1997).
• Javaux, E.J., ‘‘Extreme life on Earth-past, present and possibly beyond’’, Res. Microbiol., 157:37-48 (2006).
• Kato, S., Hara, K., Kasai, H., Teramura, T., Sunamura, M., Ishibashi, J., Kakegawa, T., Yamanaka, T., Kimura, H., Maruma, K., Urabe, T.,Yamagishi, A., ‘‘Spatial distribution, diversity and composition of bacterial communities in sub- seafloor fluids at a deep-sea hydrothermal field of the Suiyo Seamount’’, Deep-Sea Res. I, 56:1844- 1855 (2009).
• Kumar, B., Trivedi, P., Mishra, A.K., Pandey, A., Palni, L.M.S., ‘‘Microbial diversity of soil from two hot springs in Uttaranchal Himalaya’’, Microbiol. Res., 159:141-146 (2004)
• Amils, R., Gonzalez-Toril, E., Fernandez-Remolar, D., Gomez, F., Aguilera, A., Rodrıguez, N., Malki, M., Garcıa-Moyano, A., Fairen, A.G., de la Fuente, V., Sanz, J.L., ‘‘Extreme environments as Mars 180
• GU J Sci, 24(2):175-180 (2011)/ Kıvılcım ÇAKTÜ1,2, Emir Alper TÜRKOĞLU1,3 ♠
• terrestrial analogs: The Rio Tinto case’’, Planet.
• Space Sci., 55:370-381 (2007).
• Mancinelli, R.L., Fahlen, T.F., Landheim, R., Klovstad, M.R., ‘‘Brines and evaporites: analogs for Martian life’’, Adv. Space Res., 33:1244-1246 (2004).
• Deming, J.W., ‘‘Psychrophiles and polar regions’’, Curr. Opin. Microbiol., 5:301-309 (2002).
• Rothschild, L.J., Mancinelli, R.L., ‘‘Life in extreme environments’’, Nature, 409:1092-1101 (2001).
• Lee, J-K., Kim, Y.O., Sunitha, K., Oh, T.K., ‘‘Expression of thermostable alkaline protease gene from Thermoactinomyces sp. E79 in E. coli and heat activation of the gene product’’, Biotechnol. Lett., 20:837-840 (1998).