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Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species

Year 2014, Volume: 8 Issue: 3, 65 - 78, 01.11.2014

Abstract

Gardenia species have been used worldwide for ornamentation and for traditional medicines. The Thailand species observed include eight native species, G. carinata, G. collinsae, G. elata, G. jasminoides, G. obtusifolia, G. saxatilis, G. sootepensis and G. thailandica, and three introduced species, G. gjellerupii, G. taitensis, and G. volkensii. The dendrogram constructed from RAPD banding patterns shows a monophyletic group for each species. Genetic similarity (S) values range from 0.916 to 0.997 for intraspecific level and from 0.651 to 0.816 for interspecific level. The S values are in accordance with similar phenotypic characteristics and a common ancestry of the species, genera, and major groups of chemicals contained within them, such as terpenoids and flavonoids. The standard regions in the genus that could be efficiently used as barcode markers are the trnH-psbA spacer (and combinations of itself), the rbcL, and the matK genes. Genetic distance (D) values of trnH-psbA spacer sequences are 0.005 to 0.481 in intraspecific level, and 0.014 to 0.572 for the interspecific level. The combined sequences give the intraspecific and interspecific D values of 0.004 to 0.102 and 0.008 to 0.178

Year 2014, Volume: 8 Issue: 3, 65 - 78, 01.11.2014

Abstract

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Details

Other ID JA35NT99RK
Journal Section Research Article
Authors

Kittiya S. Suwannakud This is me

Runglawan Sudmoon This is me

Tawatchai Tanee This is me

Arunrat Chaveerach This is me

Publication Date November 1, 2014
Published in Issue Year 2014 Volume: 8 Issue: 3

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APA Suwannakud, K. S., Sudmoon, R., Tanee, T., Chaveerach, A. (2014). Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species. Journal of Applied Biological Sciences, 8(3), 65-78.
AMA Suwannakud KS, Sudmoon R, Tanee T, Chaveerach A. Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species. J.appl.biol.sci. November 2014;8(3):65-78.
Chicago Suwannakud, Kittiya S., Runglawan Sudmoon, Tawatchai Tanee, and Arunrat Chaveerach. “Genetic Relations Related to Chemical Containing and the Efficient Barcodes by PsbA- TrnH Spacer and Its Combinations With RbcL and MatK on Gardenia Species”. Journal of Applied Biological Sciences 8, no. 3 (November 2014): 65-78.
EndNote Suwannakud KS, Sudmoon R, Tanee T, Chaveerach A (November 1, 2014) Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species. Journal of Applied Biological Sciences 8 3 65–78.
IEEE K. S. Suwannakud, R. Sudmoon, T. Tanee, and A. Chaveerach, “Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species”, J.appl.biol.sci., vol. 8, no. 3, pp. 65–78, 2014.
ISNAD Suwannakud, Kittiya S. et al. “Genetic Relations Related to Chemical Containing and the Efficient Barcodes by PsbA- TrnH Spacer and Its Combinations With RbcL and MatK on Gardenia Species”. Journal of Applied Biological Sciences 8/3 (November 2014), 65-78.
JAMA Suwannakud KS, Sudmoon R, Tanee T, Chaveerach A. Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species. J.appl.biol.sci. 2014;8:65–78.
MLA Suwannakud, Kittiya S. et al. “Genetic Relations Related to Chemical Containing and the Efficient Barcodes by PsbA- TrnH Spacer and Its Combinations With RbcL and MatK on Gardenia Species”. Journal of Applied Biological Sciences, vol. 8, no. 3, 2014, pp. 65-78.
Vancouver Suwannakud KS, Sudmoon R, Tanee T, Chaveerach A. Genetic Relations related to Chemical Containing and the Efficient Barcodes by psbA- trnH Spacer and its Combinations with rbcL and matK on Gardenia Species. J.appl.biol.sci. 2014;8(3):65-78.