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Marul yaprak lekesi etmeni Pseudomonas viridiflava (Burkholder 1930) Dowson’nın tespiti ve bazı marul çeşitlerinin reaksiyonlarının belirlenmesi

Yıl 2020, Cilt: 60 Sayı: 2, 37 - 44, 30.06.2020
https://doi.org/10.16955/bitkorb.639801

Öz

Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 tüm dünyada ve Türkiye’de çok konukçulu bitki patojeni bir bakteridir. Beypazarı ilçesinde tarla koşullarında yetiştirilen kıvırcık tip marullarda sulumsu nekrotik lekeler, yapraklarda koyu kahverengi lekeler ve yaprak uçlarında yanıklık belirtileri bakterinin saptanması için incelenmiştir. Dört farklı tarladan 12 izolat elde edilmiştir. Patojenite testleri kıvırcık tip marul üzerinde yapılmış ve ele alınan tüm izolatlar konukçusu üzerinde patojen bulunmuştur. İzole edilen bakteriler Gram reaksiyonu, LOPAT testleri, King B besi yerinde oluşturduğu koloni morfolojisi ve VITEK-2 sistemi ile karbon kaynakları kullanımı yönüyle değerlendirilmiş ve P. viridiflava olarak tespit edilmişlerdir. Tüm testlerde benzerlik gösteren izolatları temsilen seçilen bir izolatın 16S rDNA bölgesi genetik doğrulama için sekanslanmış ve elde edilen dizi GenBank’a MN_539659 kodu ile kaydedilmiştir. Elde edilen sekans dizisinin sonucu BLAST analizi sonrası referans dizi ile %99.75 benzerlik oranı göstermiştir. Yaygın olarak üretimi yapılan iceberg, kıvırcık ve yedikule tipi üç farklı marul tipinden toplam on çeşit ile etmene karşı çeşitlerin reaksiyonu değerlendirilmiş olup çeşitler arasındaki fark istatistiksel olarak önemli bulunmuştur. Bu çalışma ile İç Anadolu Bölgesi’nde P.viridiflava marullarda ilk kez tespit edilmiştir.

Kaynakça

  • Alivizatos A.S.,1986. Tomato pith necrosis caused by Pseudomonas viridiflava. Annual Inst Phytopathology Benaki.15:41–47.
  • Aysan Y. and Cinar O. 2001. pp. 51–56. Dispersion of bacterial stem necrosis on tomato grown in greenhouses in the eastern Mediterranean region of Turkey and observations in these greenhouses; Tekirdag, Turkey.
  • Aysan Y., Mirik M., Ala A., Sahin F., Cinar O., 2003 First report of Pseudomonas viridiflava on melon in Turkey. Journal of Plant Pathology.7.
  • Aysan Y. and Uygur S., 2005. Ephytic survival of Pseudomonas viridiflava, causal agent of pith necrosis of tomato on weeds in Turkey. Journal of plant Pathology, 87 (2), 135-139.
  • Billing E., 1970. Pseudomonas viridiflava (Burkholder, 1930; Clara 1934). Journal of Applied Bacteriology. 33:492–500.
  • Burkholder W.H. The bacterial diseases of the bean. Memoirs. Cornell University Agricultural Experiment Station. 1930, 127:1-88.
  • Gonzalez A.J., Rodicio M.R., Mendoza M.C. 2003. Identification of an emergent and atypical Pseudomonas viridiflava lineage causing bacteriosis in plants of agronomic importance in a Spanish region. Applied And Environmental Microbiology Volume: 69, Issue: 5, Pages: 2936-2941.
  • Goumas D.E., Chatzaki A.K., 1998. Characterization and host range evaluation of Pseudomonas viridiflavafrom melon, blite, tomato, chrysanthemum and eggplant. European Journal of Plant Pathology. 104:181–188.
  • King E.O., Ward M.K., Raney D.E. 1954. Two simple media for the demonstration of pyocyanine and fluorescin. Journal of Laboratory of Clinical Medicine. 44:301–307.
  • Lane D. J., 1991.16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. Chichester, United Kingdom: John Wiley & Sons, pp. 115–175.
  • Lelliott R.A., Billing E., Hayward A.C. 1966. A determinative scheme for the fluorescent plant pathogenic Pseudomonads. Journal of Applied Microbiology, 29, 470–489.
  • Sahin F., 2000. First report of bacterial spot of lettuce caused by Xanthomonas campestris pv. vitians in Turkey. Plant Disease, 84: 490.
  • Marchesi J.S, Sato T., J. Weightman A.J., Martin T.A., Fry J.C., Hiom S.J., Wade W.G., 1998. Design and evaluation of usefull bacterium-specific PCR primers that amplify genes coding for bacterial 16S-rRNA. Applied Environmental Microbiology, 64:795-799.
  • Mirik M, Aysan Y., Cetinkaya Yildiz R., Sahin F., Saygili H., 2004. Watermelon is a new host of Pseudomonas viridiflava causal agent of leaf and stem necrosis, discovered in Turkey. Plant Disease 88: 907.
  • Mirik M., Aysan Y., Yıldız R.Ç., Sahin F. and Kotan R., 2004. An outbreak of bacterial leaf spot disease, caused by Xanthomonas axonopodis pv. vitians, on lettuce in the Mediterranean region of Turkey. 3 rd Balkan Symposium on Vegetables and Potatoes, 6-10 September, 2004, Bursa Turkey. Acta Horticulturae 729: 445-447.
  • Mirik M., Aysan Y. and Sahin F., 2011. Characterization of Pseudomonas cichorii isolated from different hosts in Turkey. International Journal of Agricultaral Biology, 13: 203–209.
  • Sanver U., Pazarlar S., Cetinkaya N. and Ozaktan H., 2019. First Report of Pseudomonas viridiflava Causing Bacterial Blight on Globe Artichoke in Turkey. Plant Disease, pp. PDIS-03.
  • Shaad N.W. 2001. Initial identification of common genera. Shaad N., Jones J.B. and Chun W., 2001. Laboratory Guide for Identification of Plant Pathogenic Bacteria, Third Edition, APS Press. ST. Paul, Minnesota, p. 7-9.
  • TUIK, 2018. Bitkisel üretim istatistikleri. https://biruni.tuik.gov.tr/medas/?kn=92&locale=tr
  • Ustun N. and Saygili H. 2001. pp. 70–73. Pith necrosis on greenhouse tomatoes in Aegean region of Turkey; Evora, Portugal.
  • Yildiz N., Aysan Y., Sahin F. and Cinar O., 2004. Potential inoculum sources of tomato stem and pith necrosis caused by Pseudomonas viridiflava in the eastern Mediterranean region of Turkey. Journal of Plant Diseases and Protection, 111: 380-387.

Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars

Yıl 2020, Cilt: 60 Sayı: 2, 37 - 44, 30.06.2020
https://doi.org/10.16955/bitkorb.639801

Öz

Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 is a multihost plant pathogenic bacterium all over the world and also in Turkey. The aim of this study was to identify the pathogenic bacteria causing the symptoms of water-soaked necrotic leaf spots, dark brown spots on leaves, tip burn of leaf in curly type lettuce (Lactuca sativa var. crispy) grown in the field conditions in Beypazarı region and to reveal the reactions of some lettuce cultivars against the bacteria. For this purpose, twelve isolates were obtained from 4 different locations. Pathogenicity tests were conducted on curly type lettuce and all isolates were found pathogenic on the host. Isolated bacteria were evaluated for Gram reaction, LOPAT tests, colony morphology on King’s Medium B and carbon sources utilization by VITEK-2 system and identified as Pseudomonas viridiflava. The 16S rDNA region of a selected isolate representing the similar isolates in all tests was sequenced for genetic confirmation and the obtained sequence was submitted to the GeneBank under the accession number MN_539659. The result of the obtained sequence was 99.75% similar to the respective reference sequence after BLAST analysis. Reaction of the three different widely produced lettuce types, iceberg, curly and romaine types, with ten varieties against the causative bacterial agent was evaluated and the difference between the varieties found significant statistically. In this study, P. viridiflava was detected in lettuce in Central Anatolia for the first time.

Kaynakça

  • Alivizatos A.S.,1986. Tomato pith necrosis caused by Pseudomonas viridiflava. Annual Inst Phytopathology Benaki.15:41–47.
  • Aysan Y. and Cinar O. 2001. pp. 51–56. Dispersion of bacterial stem necrosis on tomato grown in greenhouses in the eastern Mediterranean region of Turkey and observations in these greenhouses; Tekirdag, Turkey.
  • Aysan Y., Mirik M., Ala A., Sahin F., Cinar O., 2003 First report of Pseudomonas viridiflava on melon in Turkey. Journal of Plant Pathology.7.
  • Aysan Y. and Uygur S., 2005. Ephytic survival of Pseudomonas viridiflava, causal agent of pith necrosis of tomato on weeds in Turkey. Journal of plant Pathology, 87 (2), 135-139.
  • Billing E., 1970. Pseudomonas viridiflava (Burkholder, 1930; Clara 1934). Journal of Applied Bacteriology. 33:492–500.
  • Burkholder W.H. The bacterial diseases of the bean. Memoirs. Cornell University Agricultural Experiment Station. 1930, 127:1-88.
  • Gonzalez A.J., Rodicio M.R., Mendoza M.C. 2003. Identification of an emergent and atypical Pseudomonas viridiflava lineage causing bacteriosis in plants of agronomic importance in a Spanish region. Applied And Environmental Microbiology Volume: 69, Issue: 5, Pages: 2936-2941.
  • Goumas D.E., Chatzaki A.K., 1998. Characterization and host range evaluation of Pseudomonas viridiflavafrom melon, blite, tomato, chrysanthemum and eggplant. European Journal of Plant Pathology. 104:181–188.
  • King E.O., Ward M.K., Raney D.E. 1954. Two simple media for the demonstration of pyocyanine and fluorescin. Journal of Laboratory of Clinical Medicine. 44:301–307.
  • Lane D. J., 1991.16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. Chichester, United Kingdom: John Wiley & Sons, pp. 115–175.
  • Lelliott R.A., Billing E., Hayward A.C. 1966. A determinative scheme for the fluorescent plant pathogenic Pseudomonads. Journal of Applied Microbiology, 29, 470–489.
  • Sahin F., 2000. First report of bacterial spot of lettuce caused by Xanthomonas campestris pv. vitians in Turkey. Plant Disease, 84: 490.
  • Marchesi J.S, Sato T., J. Weightman A.J., Martin T.A., Fry J.C., Hiom S.J., Wade W.G., 1998. Design and evaluation of usefull bacterium-specific PCR primers that amplify genes coding for bacterial 16S-rRNA. Applied Environmental Microbiology, 64:795-799.
  • Mirik M, Aysan Y., Cetinkaya Yildiz R., Sahin F., Saygili H., 2004. Watermelon is a new host of Pseudomonas viridiflava causal agent of leaf and stem necrosis, discovered in Turkey. Plant Disease 88: 907.
  • Mirik M., Aysan Y., Yıldız R.Ç., Sahin F. and Kotan R., 2004. An outbreak of bacterial leaf spot disease, caused by Xanthomonas axonopodis pv. vitians, on lettuce in the Mediterranean region of Turkey. 3 rd Balkan Symposium on Vegetables and Potatoes, 6-10 September, 2004, Bursa Turkey. Acta Horticulturae 729: 445-447.
  • Mirik M., Aysan Y. and Sahin F., 2011. Characterization of Pseudomonas cichorii isolated from different hosts in Turkey. International Journal of Agricultaral Biology, 13: 203–209.
  • Sanver U., Pazarlar S., Cetinkaya N. and Ozaktan H., 2019. First Report of Pseudomonas viridiflava Causing Bacterial Blight on Globe Artichoke in Turkey. Plant Disease, pp. PDIS-03.
  • Shaad N.W. 2001. Initial identification of common genera. Shaad N., Jones J.B. and Chun W., 2001. Laboratory Guide for Identification of Plant Pathogenic Bacteria, Third Edition, APS Press. ST. Paul, Minnesota, p. 7-9.
  • TUIK, 2018. Bitkisel üretim istatistikleri. https://biruni.tuik.gov.tr/medas/?kn=92&locale=tr
  • Ustun N. and Saygili H. 2001. pp. 70–73. Pith necrosis on greenhouse tomatoes in Aegean region of Turkey; Evora, Portugal.
  • Yildiz N., Aysan Y., Sahin F. and Cinar O., 2004. Potential inoculum sources of tomato stem and pith necrosis caused by Pseudomonas viridiflava in the eastern Mediterranean region of Turkey. Journal of Plant Diseases and Protection, 111: 380-387.
Toplam 21 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Bölüm Makaleler
Yazarlar

Didem Canik Orel 0000-0001-8140-379X

Yayımlanma Tarihi 30 Haziran 2020
Gönderilme Tarihi 30 Ekim 2019
Kabul Tarihi 9 Ocak 2020
Yayımlandığı Sayı Yıl 2020 Cilt: 60 Sayı: 2

Kaynak Göster

APA Canik Orel, D. (2020). Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin, 60(2), 37-44. https://doi.org/10.16955/bitkorb.639801
AMA Canik Orel D. Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin. Haziran 2020;60(2):37-44. doi:10.16955/bitkorb.639801
Chicago Canik Orel, Didem. “Determination of Bacterial Leaf Spot of Lettuce Caused by Pseudomonas Viridiflava (Burkholder 1930) Dowson 1939 and the Reactions of Some Lettuce Cultivars”. Plant Protection Bulletin 60, sy. 2 (Haziran 2020): 37-44. https://doi.org/10.16955/bitkorb.639801.
EndNote Canik Orel D (01 Haziran 2020) Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin 60 2 37–44.
IEEE D. Canik Orel, “Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars”, Plant Protection Bulletin, c. 60, sy. 2, ss. 37–44, 2020, doi: 10.16955/bitkorb.639801.
ISNAD Canik Orel, Didem. “Determination of Bacterial Leaf Spot of Lettuce Caused by Pseudomonas Viridiflava (Burkholder 1930) Dowson 1939 and the Reactions of Some Lettuce Cultivars”. Plant Protection Bulletin 60/2 (Haziran 2020), 37-44. https://doi.org/10.16955/bitkorb.639801.
JAMA Canik Orel D. Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin. 2020;60:37–44.
MLA Canik Orel, Didem. “Determination of Bacterial Leaf Spot of Lettuce Caused by Pseudomonas Viridiflava (Burkholder 1930) Dowson 1939 and the Reactions of Some Lettuce Cultivars”. Plant Protection Bulletin, c. 60, sy. 2, 2020, ss. 37-44, doi:10.16955/bitkorb.639801.
Vancouver Canik Orel D. Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin. 2020;60(2):37-44.

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