Research Article

Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2

Volume: 44 Number: 1 March 26, 2023
EN

Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2

Abstract

Eight boron compounds are investigated in this study. Structural and spectral characterization is done at M062X/6-311G(d) level in the water. Active sites of these compounds are determined using contour plots of frontier molecular orbital, molecular electrostatic potential (MEP) maps and MEP contour.. Electrophilic and nucleophilic attack regions are determined. We aimed to determine whether boron compounds inhibitor used in the treatment of omicron variant of SARS-CoV-2. Since SARS-CoV-2 is a worldwide health problem, anti-viral properties of studied boron compounds were investigated using in silico techniques. Bioavaliability analyses were performed using ADME and p450. It was found that compound B7 can be good drug candidate against omicron variant of SARS-CoV-2.

Keywords

Boron-Imine compounds, SARS-CoV-2_Omicron, p450, ADME, Molecular docking.

References

  1. [1] Singhal T., A review of coronavirus disease-2019 (COVID-19), Indian J. Pediatr, 87(4) (2020) 281–286.
  2. [2] Ataseven H., Sayin K., Tüzün B., Gedikli M.A., Could boron compounds be effective against SARS-CoV-2?, Bratislava Medical Journal, 122(10) (2021) 753-758.
  3. [3] Tüzün B., Nasibova T., Garaev E., Sayin K., Ataseven H., Could Peganum harmala be effective in the treatment of COVID-19?, Bratislava Medical Journal, 122(9) (2021) 670-679.
  4. [4] Gokalp F., Sayin K., The highly protective natural medical agents against COVID-19, Bratislava Medical Journal 122(9) (2021) 631-635.
  5. [5] Cetiner E., Sayin K., Tüzün B., Ataseven H., Could boron-containing compounds (BCCs) be effective against SARS-CoV-2 as anti-viral agent?, Bratislava Medical Journal, 122(4) (2021) 263-269.
  6. [6] Aktaş A., Tüzün B., Aslan R., Sayin K., Ataseven H., New anti-viral drugs for the treatment of COVID-19 instead of favipiravir, Journal of Biomolecular Structure and Dynamics, 39(18) (2021) 7263-7273.
  7. [7] Enhancing response to Omicron SARS-CoV-2 variant: Technical brief and priority actions for Member States. World Health Organization: Headquarters, Geneve, Switzerland, Update #6: 21 January 2022, https://www.who.int/publications/m/item/enhancing-readiness-for-omicron-(b.1.1.529)-technical-brief-and-priority-actions-for-member-states.
  8. [8] Pasa S., Aydın S., Kalaycı S., Boğa M., Atlan M., Bingul M., Şahin F., Temel H., The synthesis of boronic-imine structured compounds and identification of their anticancer, antimicrobial and antioxidant activities, Journal of Pharmaceutical Analysis, 6 (2016) 39-48.
  9. [9] Gömeç M., Yulak F., Gezegen H., Özkaraca M., Sayin K., Ataseven H., Synthesis of diaryl urea derivatives and evaluation of their antiproliferative activities in colon adenocarcinoma, Journal of Molecular Structure, 1254 (2022) 132318.
  10. [10] Vanitha U., Elancheran R., Manikandan V., Kabilan S., Krishnasamy K., Design, synthesis, characterization, molecular docking and computational studies of 3-phenyl-2-thioxoimidazolidin-4-one derivatives, Journal of Molecular Structure, 1246 (2021) 131212.
APA
Sayın, K., & Ataseven, H. (2023). Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2. Cumhuriyet Science Journal, 44(1), 72-80. https://doi.org/10.17776/csj.1117056
AMA
1.Sayın K, Ataseven H. Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2. CSJ. 2023;44(1):72-80. doi:10.17776/csj.1117056
Chicago
Sayın, Koray, and Hilmi Ataseven. 2023. “Structural, Electronic, ADME and P450 Analyses of Boron Containing Compounds Against Omicron Variant (B.1.1.529) in SARS-CoV-2”. Cumhuriyet Science Journal 44 (1): 72-80. https://doi.org/10.17776/csj.1117056.
EndNote
Sayın K, Ataseven H (March 1, 2023) Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2. Cumhuriyet Science Journal 44 1 72–80.
IEEE
[1]K. Sayın and H. Ataseven, “Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2”, CSJ, vol. 44, no. 1, pp. 72–80, Mar. 2023, doi: 10.17776/csj.1117056.
ISNAD
Sayın, Koray - Ataseven, Hilmi. “Structural, Electronic, ADME and P450 Analyses of Boron Containing Compounds Against Omicron Variant (B.1.1.529) in SARS-CoV-2”. Cumhuriyet Science Journal 44/1 (March 1, 2023): 72-80. https://doi.org/10.17776/csj.1117056.
JAMA
1.Sayın K, Ataseven H. Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2. CSJ. 2023;44:72–80.
MLA
Sayın, Koray, and Hilmi Ataseven. “Structural, Electronic, ADME and P450 Analyses of Boron Containing Compounds Against Omicron Variant (B.1.1.529) in SARS-CoV-2”. Cumhuriyet Science Journal, vol. 44, no. 1, Mar. 2023, pp. 72-80, doi:10.17776/csj.1117056.
Vancouver
1.Koray Sayın, Hilmi Ataseven. Structural, Electronic, ADME and p450 Analyses of Boron Containing Compounds against Omicron Variant (B.1.1.529) in SARS-CoV-2. CSJ. 2023 Mar. 1;44(1):72-80. doi:10.17776/csj.1117056