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Biological control of pathogenic fungi using Pseudomonas brassicacearum isolated from Aronia × prunifolia (Marshall) Rehder roots

Year 2024, Volume: 11 Issue: 3, 421 - 434, 29.08.2024
https://doi.org/10.21448/ijsm.1385251

Abstract

Endophytic bacteria, which are the subject of this study, serve as natural antifungal agents in the struggle against fungal infections, offering an eco-friendly alternative to chemical fungicides. So, it was aimed to determine the antifungal capacities of endophytic bacteria from Aronia ×prunifolia roots in the study. 25 endophytic bacteria were isolated, and their ability to act as biocontrol agents was evaluated by measuring fungal growth inhibition and chemical properties. Later, bacteria that showed a positive effect were identified through 16S gene sequencing. The results showed that the LB2 bacteria had the greatest ability to inhibit the selected fungi and the biochemical tests showed that the bacteria were Gram-negative, did not form spores, their colonies were well defined, and they could break down starch and gelatin, which was later diagnosed as Pseudomonas brassicacearum according to phylogenetic relationships. This study is the first report on which P. brassicacearum was isolated from A. ×prunifolia roots for the first time. These findings contribute to our understanding of the potential of endophytic bacteria, particularly P. brassicacearum, as natural antifungal agents in plant and human protection, offering a promising and sustainable approach to combat fungal infections while reducing the use of chemical fungicides.

References

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Biological control of pathogenic fungi using Pseudomonas brassicacearum isolated from Aronia × prunifolia (Marshall) Rehder roots

Year 2024, Volume: 11 Issue: 3, 421 - 434, 29.08.2024
https://doi.org/10.21448/ijsm.1385251

Abstract

Endophytic bacteria, which are the subject of this study, serve as natural antifungal agents in the struggle against fungal infections, offering an eco-friendly alternative to chemical fungicides. So, it was aimed to determine the antifungal capacities of endophytic bacteria from Aronia ×prunifolia roots in the study. 25 endophytic bacteria were isolated, and their ability to act as biocontrol agents was evaluated by measuring fungal growth inhibition and chemical properties. Later, bacteria that showed a positive effect were identified through 16S gene sequencing. The results showed that the LB2 bacteria had the greatest ability to inhibit the selected fungi and the biochemical tests showed that the bacteria were Gram-negative, did not form spores, their colonies were well defined, and they could break down starch and gelatin, which was later diagnosed as Pseudomonas brassicacearum according to phylogenetic relationships. This study is the first report on which P. brassicacearum was isolated from A. ×prunifolia roots for the first time. These findings contribute to our understanding of the potential of endophytic bacteria, particularly P. brassicacearum, as natural antifungal agents in plant and human protection, offering a promising and sustainable approach to combat fungal infections while reducing the use of chemical fungicides.

References

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  • Adeleke, B.S., & Babalola, O.O. (2022). Meta-omics of endophytic microbes in agricultural biotechnology. Biocatalysis and Agricultural Biotechnology, 42, 102332. https://doi.org/10.1016/j.bcab.2022.102332
  • Afsharmanesh, H., Ahmadzadeh, M., & Sharifi-Tehrani, A. (2006). Biocontrol of Rhizoctonia solani, the causal agent of bean damping-off by fluorescent pseudomonads. Communications in Agricultural and Applied Biological Sciences, 71(3 Pt B), 1021-1029.
  • Akdemir, S., Torçuk, A.I., & Uysal Seçkin, G. (2023). Determination of Quality Parameters of Aronia Melanocarpa During Cold Storage. Erwerbs Obstbau, 1 7. https://doi.org/10.1007/s10341-023-00845-4
  • Alsohiby, F.A.A., Yahya, S., & Humaid, A.A. (2016). Screening of soil isolates of bacteria for antagonistic activity against plant pathogenic fungi. PSM Microbiology, 1(1), 5-9.
  • Anand, U., Pal, T., Yadav, N., Singh, V.K., Tripathi, V., Choudhary, K.K., ... & Singh, A.K. (2023). Current scenario and future prospects of endophytic microbes: promising candidates for abiotic and biotic stress management for agricultural and environmental sustainability. Microbial Ecology, 1-32. https://doi.org/10.1007/s00248-023-02190-1
  • Bahmani, K., Hasanzadeh, N., Harighi, B., & Marefat, A. (2021). Isolation and identification of endophytic bacteria from potato tissues and their effects as biological control agents against bacterial wilt. Physiological and Molecular Plant Pathology, 116, 101692.‏ https://doi.org/10.1016/j.pmpp.2021.101692
  • Berg, G., & Hallmann, J. (2006). Control of plant pathogenic fungi with bacterial endophytes. Microbial Root Endophytes, 53-69. https://doi.org/10.1007/3-540-33526-9
  • Berg, G., Krechel, A., Ditz, M., Sikora, R.A., Ulrich, A., & Hallmann, J. (2005). Endophytic and ectophytic potato-associated bacterial communities differ in structure and antagonistic function against plant pathogenic fungi. FEMS Microbiology Ecology, 51(2), 215-229. https://doi.org/10.1016/j.femsec.2004.08.006
  • Berry, C., Fernando, W.D., Loewen, P.C., & De Kievit, T.R. (2010). Lipopeptides are essential for Pseudomonas sp. DF41 biocontrol of Sclerotinia sclerotiorum. Biological Control, 55(3), 211-218. https://doi.org/10.1016/j.biocontrol.2010.09.011
  • Bhaskar, P.V., Grossart, H.P., Bhosle, N.B., & Simon, M. (2005). Production of macroaggregates from dissolved exopolymeric substances (EPS) of bacterial and diatom origin. FEMS Microbiology Ecology, 53(2), 255 264. https://doi.org/10.1016/j.femsec.2004.12.013
  • Boonman, N., Chutrtong, J., Wanna, C., Boonsilp, S., & Chunchob, S. (2023). Antimicrobial activities of endophytic bacteria isolated from Ageratum conyzoides Linn. Biodiversitas Journal of Biological Diversity, 24(4). https://doi.org/10.13057/biodiv/d240405
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There are 66 citations in total.

Details

Primary Language English
Subjects Microbiology (Other)
Journal Section Articles
Authors

Luau Burhan Mustafa 0000-0001-8197-4357

Ahmed Ismael Naqee Al-bayatı 0000-0001-5411-7448

Dunya Albayati 0009-0006-9152-2323

İbrahim Özkoç 0000-0001-8179-0961

Early Pub Date August 6, 2024
Publication Date August 29, 2024
Submission Date November 2, 2023
Acceptance Date March 19, 2024
Published in Issue Year 2024 Volume: 11 Issue: 3

Cite

APA Mustafa, L. B., Al-bayatı, A. I. N., Albayati, D., Özkoç, İ. (2024). Biological control of pathogenic fungi using Pseudomonas brassicacearum isolated from Aronia × prunifolia (Marshall) Rehder roots. International Journal of Secondary Metabolite, 11(3), 421-434. https://doi.org/10.21448/ijsm.1385251
International Journal of Secondary Metabolite

e-ISSN: 2148-6905