Research Article

A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING

Volume: 12 Number: 3 September 1, 2024
EN

A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING

Abstract

Multi-organ segmentation is the process of identifying and separating multiple organs in medical images. This segmentation allows for the detection of structural abnormalities by examining the morphological structure of organs. Carrying out the process quickly and precisely has become an important issue in today's conditions. In recent years, researchers have used various technologies for the automatic segmentation of multiple organs. In this study, improvements were made to increase the multi-organ segmentation performance of the 3D U-Net based fusion model combining HSV and grayscale color spaces and compared with state-of-the-art models. Training and testing were performed on the MICCAI 2015 dataset published at Vanderbilt University, which contains 3D abdominal CT images in NIfTI format. The model's performance was evaluated using the Dice similarity coefficient. In the tests, the liver organ showed the highest Dice score. Considering the average Dice score of all organs, and comparing it with other models, it has been observed that the fusion approach model yields promising results.

Keywords

References

  1. N. Shen et al., "Multi-organ segmentation network for abdominal CT images based on spatial attention and deformable convolution," Expert Systems with Applications, vol. 211, p. 118625, 2023.
  2. Y. Wang, Y. Zhou, W. Shen, S. Park, E. K. Fishman, and A. L. Yuille, "Abdominal multi-organ segmentation with organ-attention networks and statistical fusion," Medical image analysis, vol. 55, pp. 88-102, 2019.
  3. Y. LeCun, Y. Bengio, and G. Hinton, "Deep learning," nature, vol. 521, no. 7553, pp. 436-444, 2015.
  4. A. Şeker, B. Diri, and H. H. Balık, "A review about deep learning methods and applications," Gazi J Eng Sci, vol. 3, no. 3, pp. 47-64, 2017.
  5. G. Guo and N. Zhang, "A survey on deep learning based face recognition," Computer vision and image understanding, vol. 189, p. 102805, 2019.
  6. H.-S. Bae, H.-J. Lee, and S.-G. Lee, "Voice recognition based on adaptive MFCC and deep learning," in 2016 IEEE 11th Conference on Industrial Electronics and Applications (ICIEA), 2016: IEEE, pp. 1542-1546.
  7. S. Caldera, A. Rassau, and D. Chai, "Review of deep learning methods in robotic grasp detection," Multimodal Technologies and Interaction, vol. 2, no. 3, p. 57, 2018.
  8. G. Litjens et al., "A survey on deep learning in medical image analysis," Medical image analysis, vol. 42, pp. 60-88, 2017.

Details

Primary Language

English

Subjects

Biomedical Imaging

Journal Section

Research Article

Publication Date

September 1, 2024

Submission Date

December 15, 2023

Acceptance Date

June 20, 2024

Published in Issue

Year 2024 Volume: 12 Number: 3

APA
Kayhan, B., & Uymaz, S. A. (2024). A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING. Konya Journal of Engineering Sciences, 12(3), 671-686. https://doi.org/10.36306/konjes.1404420
AMA
1.Kayhan B, Uymaz SA. A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING. KONJES. 2024;12(3):671-686. doi:10.36306/konjes.1404420
Chicago
Kayhan, Beyza, and Sait Ali Uymaz. 2024. “A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING”. Konya Journal of Engineering Sciences 12 (3): 671-86. https://doi.org/10.36306/konjes.1404420.
EndNote
Kayhan B, Uymaz SA (September 1, 2024) A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING. Konya Journal of Engineering Sciences 12 3 671–686.
IEEE
[1]B. Kayhan and S. A. Uymaz, “A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING”, KONJES, vol. 12, no. 3, pp. 671–686, Sept. 2024, doi: 10.36306/konjes.1404420.
ISNAD
Kayhan, Beyza - Uymaz, Sait Ali. “A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING”. Konya Journal of Engineering Sciences 12/3 (September 1, 2024): 671-686. https://doi.org/10.36306/konjes.1404420.
JAMA
1.Kayhan B, Uymaz SA. A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING. KONJES. 2024;12:671–686.
MLA
Kayhan, Beyza, and Sait Ali Uymaz. “A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING”. Konya Journal of Engineering Sciences, vol. 12, no. 3, Sept. 2024, pp. 671-86, doi:10.36306/konjes.1404420.
Vancouver
1.Beyza Kayhan, Sait Ali Uymaz. A 3D U-NET BASED ON EARLY FUSION MODEL: IMPROVEMENT, COMPARATIVE ANALYSIS WITH STATE-OF-THE-ART MODELS AND FINE-TUNING. KONJES. 2024 Sep. 1;12(3):671-86. doi:10.36306/konjes.1404420