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The Effect of Tapak Liman (Elephantopus scaber L.) Extract on Xa4 Gene Expression in Rice IR64 Infected by Bacterial Leaf Blight (Xanthomonas oryzae)

Yıl 2024, Cilt: 11 Sayı: 1, 15 - 22, 05.02.2024
https://doi.org/10.21448/ijsm.1224397

Öz

Bacterial leaf blight, caused by Xanthomonas oryzae pv. oryzae (Xoo), represents a significant threat to rice (Oryza sativa) production. Induce plant resistance has emerged as a promising control strategy. The extract of Tapak Liman (Elephantopus scaber) has been considered a promising agent due to its antimicrobial properties, with several of its compounds showing its potential as inducers of plant resistance. This study aimed at elucidating the impact of Tapak Liman extract on the expression of resistance Xa4 gene in rice that plays a crucial role in the synthesis mechanism leading to cell wall thickening. To explore this effect, we analyzed Xa4 gene expression using the reverse transcription-polymerase chain reaction (RT-PCR) technique, followed by a semi-quantitative descriptive analysis. Our results demonstrate that the application of Tapak Liman extracts at a concentration of 10 mg/ml significantly upregulates Xa4 gene expression in the IR64 compared with other concentrations, 1 mg/ml or 5 mg/ml. Furthermore, the observed higher expression of the Xa4 gene persists until 5 days after pathogen inoculation, which is also implicated with a less developed lesion on rice leaves by 76% compared with the control.

Destekleyen Kurum

University of Jember

Proje Numarası

4413/UN25.3.1/LT/2022.

Kaynakça

  • Abo-Elyousr, K.A.M., Almasoudi, N.M., Abdelmagid, A.W.M., Roberto, S.R., & Youssef, K. (2020). Plant extract treatments induce resistance to bacterial spot by tomato plants for a sustainable system. Horticulturae, 6, 36. https://doi.org/10.3390/horticulturae6020036
  • Arunakumari, K., Durgarani, C.V., Satturu V., Sarikonda, R.K., Chittoor P.D.R., Vutukuri B., Laha G.S., Nelli, A.P.K., Gattu, S., Jamal, M., Prasadbabu A, Hajira, S., & Sundaram, R.M. (2016). Marker-assisted pyramiding of genes conferring resistance against bacterial blight and blast diseases into Indian rice variety MTU1010. Rice Science, 23(6), 306 316. https://doi.org/10.1016/j.rsci.2016.04.005
  • Ashfaq, M., Iqbal, S., Mukhtar, T., & Shah, H. (2014) Screening for resistance to Cucumber mosaic virus, Cucumovirus in chili. Journal of Animal and Plant Science, 24, 791-795. https://doi.org/10.3389/fpls.2018.01106
  • Chan, Z. (2013). Proteomic responses of fruits to environmental stresses. Frontiers in Plant Science, 3, 311, https://doi.org/10.3389/fpls.2012.00311
  • Coll, N.S., Eplle, P., & Dangi, J.L. (2011). Programmed cell death in the plant immune system. Cell Death and Differentiation, 18, 1247-1256. https://doi.org/10.1038/cdd.2011.37
  • Demidchiko, V. (2015). Mechanisms of oxidative stress in plants: from classical chemistry to cell biology. Environmental and Experimental Botany, 109, 212 228. https://doi.org/10.1016/j.envexpbot.2014.06.021
  • Fiyaz, R.A., Shivani, D., Chaithanya, K., Mounika, K., Chiranjeevi, M., Laha, G.S., Viraktamath, B.C., Subba Rao, B.C., & Sundaram, R.M. (2022). Genetic improvement of rice for bacterial blight resistance: Present status and future prospects. Rice Science, 29(2), 118 132. https://doi.org/10.1016/j.rsci.2021.08.002.
  • Hazman, M. (2022) Gel express: a novel frugal method quantifies gene relative expression in conventional RT-PCR. Beni-Suef University Journal of Basic and Applied Sciences, 11, 11. https://doi.org/10.1186/s43088-022-00194-3
  • Herrera-Vásquez, A., Salinas, P., & Holuigue, L. (2015). Salicylic acid and reactive oxygen species interplay in the transcriptional control of defense genes expression. Front. Plant Sci, 6, 171. https://doi.org/10.3389/fpls.2015.00171.
  • Hönig, M., Roeber, V.M., Schmülling, T., & Cortleven, A. (2023). Chemical priming of plant defense responses to pathogen attacks. Front. Plant Sci., 14, 1146577. https://doi.org/10.3389/fpls.2023.1146577
  • Horváth, E., Szalai, G. & Janda, T. (2007). Induction of abiotic stress tolerance by salicylic acid signaling. Journal of Plant Growth Regulation, 26, 290 300. https://doi.org/10.1007/s00344-007-9017-4
  • Ishihara, A., Ando, K., Yoshioka, A., Murata, K., Kokubo, Y., Morimoto, N., Ube, N., Yabuta, Y., Ueno, M., Tebayashi, S., Ueno K., & Osaki-Oka, K. (2019). Induction of defense responses by extracts of spent mushroom substrates in rice. Pesticides, 44(2), 89 96. https://doi.org/10.1584/jpestics.D18-063 Ji, Z., Wang., & Zhao, J. (2018). Rice routes of countering Xanthomonas oryzae. Molecular Science, 19(10), 3008. https://doi.org/103390/ijms19103008
  • Jiang, N., Yan, J., Liang, Y., Shi, Y., He Z., Wu, Y., Zeng, Q, Liu X., & Peng, J. (2020). Resistance genes and their interactions with bacterial blight/leaf streak pathogens (Xanthomonas oryzae) in rice (Oryza sativa L.) an Updated Review. Rice, 13, 3. https://doi.org/10.1186/s12284-019-0358-y
  • Kabiru. A., & Poor, L.Y. (2013). Elephantopus species: traditional uses, pharmacological actions and chemical composition. Advances in Life Science and Technology, 15, 6-14.
  • Ke, Y., Hui, S., &Yuan, M. (2017). Xanthomonas oryzae pv. Oryzae Inoculation and growth rate on rice by leaf clipping Method. Bio Protocol, 7(19), e2568. http://doi.org/10.21769/BioProtoc.2568.
  • Khatee, E., Karimi, F., & Razavi, K. (2019). Alkaloids production and antioxidant properties in Catharanthus roseus (L.) G. Don. Shoots and study of alkaloid biosynthesis- related gene expression levels in response to methyl jasmonate and putrescine treatments as eco-friendly elicitors. Biologi Futura, 70(1), 38-46. https://doi.org/10.1556/019.70.2019.05
  • Krzyzaniak, Y., Trouvelot, S., Negrel, J., Cluzet, S., Valls, J., Richard, T., Bougaud, A., Jacquens, L., Klinguer, A., Chiltz, A., Adrian, M., & Héloir, M-.C (2018). A plant extract acts both as a resistance inducer and an oomycide against grapevine downy mildew. Front. Plant Sci, 9, 1085. https://doi.org/10.3389/fpls.2018.01085
  • Liu, W., & Wang, G.L. (2016). Plant innate immunity in rice: a defense against pathogen infection. National Science Review, 3(3), 295–308, https://doi.org/10.1093/nsr/nww015
  • Mazarei, M., Baxter, H.L., Li, M., Biswal, A.K., Kim, K., Meng, X., Pu, Y., Wuddineh, W.A., Zhang, J.Y., Turner, G.B., Sykes, R.W., Davis, M.F., Udvardi, M.K., Wang, Z.Y., Mohnen, D., Ragauskas, A.J., Labbé, N., & Stewart, C.N Jr. (2018) Functional analysis of cellulose synthase CesA4 and CesA6 genes in switchgrass (Panicum virgatum) by overexpression and RNAi Mediated Gene Silencing. Front. Plant Sci., 9, 1114. https://doi.org/10.3389/fpls.2018.01114.
  • Nadhira, N.E., Wafa, A. & Fanata, W.I.D., & Addy, H.S. (2022) Resistance gene expression in selected Indonesian pigmented rice varieties against infection by Xanthomonas oryzae pv. Oryzae. Indonesian Journal of Biotechnology, 27(2), 51 57. https://doi.org/10.22146/ijbiotech.70445
  • Nadhira, N.E., Wahyuni, I.D., & Addy, H.S. (2021). The potency of plant resistance inducers (PRIs) against bacterial wilt disease on tobacco caused by Ralstonia solanacearum. IOP Conference Series: Earth and Environmental Science, 759(1), 012067. https://doi.org/10.1088/1755-1315/759/1/012067
  • Ramaroson, M.-L., Koutouan, C., Helesbeux, J.-J., Le Clerc, V., Hamama, L., Geoffriau, E., Briard, M. (2020). Role of phenylpropanoids and flavonoids in plant resistance to pests and diseases. Molecules, 27, 8371. https://doi.org/10.3390/molecules27238371
  • Rejeki, D., Addy, H.S., & Narulita, E. (2021). Partial characterization of bacteriophages from Indonesia and its potency as biocontrol of Xanthomonas oryzae pv. Oryzae. International Journal of Agriculture and Biololgy, 25, 75‒80. https://doi.org/10.17957/IJAB/15.1640
  • Walters, D., Walsh, D., Newton, A., & Lyon, G. (2005). Induced resistance for plant disease control: Maximizing the efficacy of resistance elicitors. Phytopathology, 95, 1368 1373. https://doi.org/10.1094/phyto-95-1368
  • Walters, D.R., Ratsep, J., & Havis, N.D. (2013) Controlling crop diseases using induced resistance: challenges for the future. Journal of Experimental Botany, 64(5), 1263 1280. https://doi.org/10.1093/jxb/ert026
  • Zafar, K., Sedeek, K.E.M., Rao, G.S., Khan, M.Z., Amin, I., Kamel, R., Mukhtar, Z., Zafar, M., Mansoor, S., & Mahfouz, M.M. (2020) Genome editing technologies for rice ımprovement: progress, prospects, and safety concerns. Front. Genome Ed., 2, 5. http://doi.org/10.3389/fgeed.2020.00005

The Effect of Tapak Liman (Elephantopus scaber L.) Extract on Xa4 Gene Expression in Rice IR64 Infected by Bacterial Leaf Blight (Xanthomonas oryzae)

Yıl 2024, Cilt: 11 Sayı: 1, 15 - 22, 05.02.2024
https://doi.org/10.21448/ijsm.1224397

Öz

Bacterial leaf blight, caused by Xanthomonas oryzae pv. oryzae (Xoo), represents a significant threat to rice (Oryza sativa) production. Induce plant resistance has emerged as a promising control strategy. The extract of Tapak Liman (Elephantopus scaber) has been considered a promising agent due to its antimicrobial properties, with several of its compounds showing its potential as inducers of plant resistance. This study aimed at elucidating the impact of Tapak Liman extract on the expression of resistance Xa4 gene in rice that plays a crucial role in the synthesis mechanism leading to cell wall thickening. To explore this effect, we analyzed Xa4 gene expression using the reverse transcription-polymerase chain reaction (RT-PCR) technique, followed by a semi-quantitative descriptive analysis. Our results demonstrate that the application of Tapak Liman extracts at a concentration of 10 mg/ml significantly upregulates Xa4 gene expression in the IR64 compared with other concentrations, 1 mg/ml or 5 mg/ml. Furthermore, the observed higher expression of the Xa4 gene persists until 5 days after pathogen inoculation, which is also implicated with a less developed lesion on rice leaves by 76% compared with the control.

Proje Numarası

4413/UN25.3.1/LT/2022.

Kaynakça

  • Abo-Elyousr, K.A.M., Almasoudi, N.M., Abdelmagid, A.W.M., Roberto, S.R., & Youssef, K. (2020). Plant extract treatments induce resistance to bacterial spot by tomato plants for a sustainable system. Horticulturae, 6, 36. https://doi.org/10.3390/horticulturae6020036
  • Arunakumari, K., Durgarani, C.V., Satturu V., Sarikonda, R.K., Chittoor P.D.R., Vutukuri B., Laha G.S., Nelli, A.P.K., Gattu, S., Jamal, M., Prasadbabu A, Hajira, S., & Sundaram, R.M. (2016). Marker-assisted pyramiding of genes conferring resistance against bacterial blight and blast diseases into Indian rice variety MTU1010. Rice Science, 23(6), 306 316. https://doi.org/10.1016/j.rsci.2016.04.005
  • Ashfaq, M., Iqbal, S., Mukhtar, T., & Shah, H. (2014) Screening for resistance to Cucumber mosaic virus, Cucumovirus in chili. Journal of Animal and Plant Science, 24, 791-795. https://doi.org/10.3389/fpls.2018.01106
  • Chan, Z. (2013). Proteomic responses of fruits to environmental stresses. Frontiers in Plant Science, 3, 311, https://doi.org/10.3389/fpls.2012.00311
  • Coll, N.S., Eplle, P., & Dangi, J.L. (2011). Programmed cell death in the plant immune system. Cell Death and Differentiation, 18, 1247-1256. https://doi.org/10.1038/cdd.2011.37
  • Demidchiko, V. (2015). Mechanisms of oxidative stress in plants: from classical chemistry to cell biology. Environmental and Experimental Botany, 109, 212 228. https://doi.org/10.1016/j.envexpbot.2014.06.021
  • Fiyaz, R.A., Shivani, D., Chaithanya, K., Mounika, K., Chiranjeevi, M., Laha, G.S., Viraktamath, B.C., Subba Rao, B.C., & Sundaram, R.M. (2022). Genetic improvement of rice for bacterial blight resistance: Present status and future prospects. Rice Science, 29(2), 118 132. https://doi.org/10.1016/j.rsci.2021.08.002.
  • Hazman, M. (2022) Gel express: a novel frugal method quantifies gene relative expression in conventional RT-PCR. Beni-Suef University Journal of Basic and Applied Sciences, 11, 11. https://doi.org/10.1186/s43088-022-00194-3
  • Herrera-Vásquez, A., Salinas, P., & Holuigue, L. (2015). Salicylic acid and reactive oxygen species interplay in the transcriptional control of defense genes expression. Front. Plant Sci, 6, 171. https://doi.org/10.3389/fpls.2015.00171.
  • Hönig, M., Roeber, V.M., Schmülling, T., & Cortleven, A. (2023). Chemical priming of plant defense responses to pathogen attacks. Front. Plant Sci., 14, 1146577. https://doi.org/10.3389/fpls.2023.1146577
  • Horváth, E., Szalai, G. & Janda, T. (2007). Induction of abiotic stress tolerance by salicylic acid signaling. Journal of Plant Growth Regulation, 26, 290 300. https://doi.org/10.1007/s00344-007-9017-4
  • Ishihara, A., Ando, K., Yoshioka, A., Murata, K., Kokubo, Y., Morimoto, N., Ube, N., Yabuta, Y., Ueno, M., Tebayashi, S., Ueno K., & Osaki-Oka, K. (2019). Induction of defense responses by extracts of spent mushroom substrates in rice. Pesticides, 44(2), 89 96. https://doi.org/10.1584/jpestics.D18-063 Ji, Z., Wang., & Zhao, J. (2018). Rice routes of countering Xanthomonas oryzae. Molecular Science, 19(10), 3008. https://doi.org/103390/ijms19103008
  • Jiang, N., Yan, J., Liang, Y., Shi, Y., He Z., Wu, Y., Zeng, Q, Liu X., & Peng, J. (2020). Resistance genes and their interactions with bacterial blight/leaf streak pathogens (Xanthomonas oryzae) in rice (Oryza sativa L.) an Updated Review. Rice, 13, 3. https://doi.org/10.1186/s12284-019-0358-y
  • Kabiru. A., & Poor, L.Y. (2013). Elephantopus species: traditional uses, pharmacological actions and chemical composition. Advances in Life Science and Technology, 15, 6-14.
  • Ke, Y., Hui, S., &Yuan, M. (2017). Xanthomonas oryzae pv. Oryzae Inoculation and growth rate on rice by leaf clipping Method. Bio Protocol, 7(19), e2568. http://doi.org/10.21769/BioProtoc.2568.
  • Khatee, E., Karimi, F., & Razavi, K. (2019). Alkaloids production and antioxidant properties in Catharanthus roseus (L.) G. Don. Shoots and study of alkaloid biosynthesis- related gene expression levels in response to methyl jasmonate and putrescine treatments as eco-friendly elicitors. Biologi Futura, 70(1), 38-46. https://doi.org/10.1556/019.70.2019.05
  • Krzyzaniak, Y., Trouvelot, S., Negrel, J., Cluzet, S., Valls, J., Richard, T., Bougaud, A., Jacquens, L., Klinguer, A., Chiltz, A., Adrian, M., & Héloir, M-.C (2018). A plant extract acts both as a resistance inducer and an oomycide against grapevine downy mildew. Front. Plant Sci, 9, 1085. https://doi.org/10.3389/fpls.2018.01085
  • Liu, W., & Wang, G.L. (2016). Plant innate immunity in rice: a defense against pathogen infection. National Science Review, 3(3), 295–308, https://doi.org/10.1093/nsr/nww015
  • Mazarei, M., Baxter, H.L., Li, M., Biswal, A.K., Kim, K., Meng, X., Pu, Y., Wuddineh, W.A., Zhang, J.Y., Turner, G.B., Sykes, R.W., Davis, M.F., Udvardi, M.K., Wang, Z.Y., Mohnen, D., Ragauskas, A.J., Labbé, N., & Stewart, C.N Jr. (2018) Functional analysis of cellulose synthase CesA4 and CesA6 genes in switchgrass (Panicum virgatum) by overexpression and RNAi Mediated Gene Silencing. Front. Plant Sci., 9, 1114. https://doi.org/10.3389/fpls.2018.01114.
  • Nadhira, N.E., Wafa, A. & Fanata, W.I.D., & Addy, H.S. (2022) Resistance gene expression in selected Indonesian pigmented rice varieties against infection by Xanthomonas oryzae pv. Oryzae. Indonesian Journal of Biotechnology, 27(2), 51 57. https://doi.org/10.22146/ijbiotech.70445
  • Nadhira, N.E., Wahyuni, I.D., & Addy, H.S. (2021). The potency of plant resistance inducers (PRIs) against bacterial wilt disease on tobacco caused by Ralstonia solanacearum. IOP Conference Series: Earth and Environmental Science, 759(1), 012067. https://doi.org/10.1088/1755-1315/759/1/012067
  • Ramaroson, M.-L., Koutouan, C., Helesbeux, J.-J., Le Clerc, V., Hamama, L., Geoffriau, E., Briard, M. (2020). Role of phenylpropanoids and flavonoids in plant resistance to pests and diseases. Molecules, 27, 8371. https://doi.org/10.3390/molecules27238371
  • Rejeki, D., Addy, H.S., & Narulita, E. (2021). Partial characterization of bacteriophages from Indonesia and its potency as biocontrol of Xanthomonas oryzae pv. Oryzae. International Journal of Agriculture and Biololgy, 25, 75‒80. https://doi.org/10.17957/IJAB/15.1640
  • Walters, D., Walsh, D., Newton, A., & Lyon, G. (2005). Induced resistance for plant disease control: Maximizing the efficacy of resistance elicitors. Phytopathology, 95, 1368 1373. https://doi.org/10.1094/phyto-95-1368
  • Walters, D.R., Ratsep, J., & Havis, N.D. (2013) Controlling crop diseases using induced resistance: challenges for the future. Journal of Experimental Botany, 64(5), 1263 1280. https://doi.org/10.1093/jxb/ert026
  • Zafar, K., Sedeek, K.E.M., Rao, G.S., Khan, M.Z., Amin, I., Kamel, R., Mukhtar, Z., Zafar, M., Mansoor, S., & Mahfouz, M.M. (2020) Genome editing technologies for rice ımprovement: progress, prospects, and safety concerns. Front. Genome Ed., 2, 5. http://doi.org/10.3389/fgeed.2020.00005
Toplam 26 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Yapısal Biyoloji
Bölüm Makaleler
Yazarlar

Hardian Susilo Addy 0000-0001-7823-0859

Nur Habibullah Bu kişi benim 0009-0000-0324-3962

Wulan Arum Hardiyani Bu kişi benim 0009-0008-5354-6003

Ali Wafa Bu kişi benim 0000-0001-5743-7762

Proje Numarası 4413/UN25.3.1/LT/2022.
Yayımlanma Tarihi 5 Şubat 2024
Gönderilme Tarihi 26 Aralık 2022
Yayımlandığı Sayı Yıl 2024 Cilt: 11 Sayı: 1

Kaynak Göster

APA Addy, H. S., Habibullah, N., Hardiyani, W. A., Wafa, A. (2024). The Effect of Tapak Liman (Elephantopus scaber L.) Extract on Xa4 Gene Expression in Rice IR64 Infected by Bacterial Leaf Blight (Xanthomonas oryzae). International Journal of Secondary Metabolite, 11(1), 15-22. https://doi.org/10.21448/ijsm.1224397
International Journal of Secondary Metabolite
e-ISSN: 2148-6905