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Türkiye’de Çift Kabuklu Yumuşakçalarda Betanodavirus Varlığının Araştırılması

Yıl 2022, , 415 - 425, 01.09.2022
https://doi.org/10.22392/actaquatr.1088276

Öz

Özet: Viral nervöz nekrozis (VNN), özellikle larva ve yavru deniz balıklarında, bazen de yetişkinlerde görülen önemli viral bir hastalıktır. Akdeniz’de artık levreklerde endemik olarak kabul edilen ve sık sık salgınlara neden olan betanodavirusların RGNNV genotipinin yanısıra, son birkaç yılda çipuralarda da salgınlar daha sık bildirilmeye başlanmış ve RGNNV/SJNNV genotipi izole edilmiştir. Bu çalışmanın amacı resmi otoriteden onaylı doğal yataklarda yetiştirilen akivades (Ruditapes decussatus) ve kara midye (Mytilus galloprovincialis) istasyonlarında VNN etkeni betanodavirus varlığının araştırılmasıdır. Çalışmada 2016-2020 yılları arasında beş adet akivades, sekiz adet kara midye istasyonundan toplam 50 örnekleme yapılmıştır. Akivades örneklemesi Ağustos aylarında, kara midye örneklemesi ise Eylül aylarında gerçekleştirilmiştir. Her örneklemede her istasyondan 30 adet örnek alınmıştır ve her biri beş örnekten oluşmak üzere toplam 300 adet havuz oluşturulmuştur. Çift kabuklu yumuşakçaların hepatopankreaslarından hazırlanan örnekler, Real-Time Reverse Transcriptase Polimerase Chain Reaction (RT-qPCR) testi ile betanodavirus yönünden araştırılmıştır. RT-qPCR testleri sonucunda hem akivades örneklerinde hem kara midye örneklerinde betanodavirus nükleik asidi tespit edilmemiştir. Türkiye’de çift kabuklu yumuşakçalarda betanodavirus varlığı ilk defa bu çalışma ile araştırılmıştır. Sonuç olarak bu çalışma ile sadece doğal yataklarda bulunan midye ve akivadeslerde araştırma yapılmıştır, ancak, virüsün daha çok endemik olduğu Güney Ege ve Akdeniz bölgelerinde resmi onaylı akivades veya kara midye istasyonu bulunmadığından bu bölgelerde örnekleme yapılmamıştır. Kabuklularda betanodavirus epidemiyolojisini daha iyi anlamak için bu bölgeleri de içeren daha ileri ve genişletilmiş çalışmalara ihtiyaç vardır.

Destekleyen Kurum

İzmir/Bornova Veteriner Kontrol Enstitüsü

Teşekkür

Yazarlar, desteklerinden ve teşviklerinden dolayı İzmir/Bornova Veteriner Kontrol Enstitüsü Müdürlüğü’ne teşekkür etmektedir.

Kaynakça

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  • Baeck, G. W., Gomez, D. K., Oh, K. S., Kim, J. H., Choresca, C. H., & Park, S. C. (2007). Detection of piscine Nodaviruses from apparently healthy wild marine fish in Korea. Bulletin of the European Association of Fish Pathologists, 27, 116–122.
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  • Barker, D. E., MacKinnon, A. M., Boston, L., Burt, M. D., Cone, D. K., Speare, D. J., Griffiths S, Cook M, Ritchie R, & Olivier, G. (2002). First report of piscine nodavirus infecting wild winter flounder Pleuronectes americanus in Passamaquoddy Bay, New Brunswick, Canada. Diseases of Aquatic Organisms, 49(2), 99-105. https://doi:10.3354/dao049099
  • Berzak, R., Scheinin, A., Davidovich, N., Regev, Y., Diga, R., Tchernov, D., & Morick, D. (2019). Prevalence of nervous necrosis virus (NNV) and Streptococcus species in wild marine fish and crustaceans from the Levantine Basin, Mediterranean Sea. Diseases of Aquatic Organisms, 133, 7-17. https://doi.org/10.3354/dao03339
  • Bitchava, K., Xylouri, E., Fragkiadaki, E., Athanassopoulou, F., Sabatakou, O., & Papanastassopoulou, M. (2007). First incidence of clinical signs of nodavirus infection in sea bream, Sparus auratus L. The Israeli Journal of Aquaculture, 59, 3–9.
  • Bitchava, K., Chassalevris, T., Lampou, E., Athanassopoulou, F., Economou, V., & Dovas, C. I. (2019). Occurrence and molecular characterization of betanodaviruses in fish and invertebrates of the Greek territorial waters. Journal of Fish Diseases, 42(12), 1773-1783. https://doi.org/10.1111/jfd.13098
  • Breuil, G., Bonami, J. R., Pepin, J. F., & Pichot, Y. (1991). Viral infection (picorna-like virus) associated with mass mortalities in hatchery-reared sea-bass (Dicentrarchus labrax) larvae and juveniles. Aquaculture, 97(2-3), 109-116. https://doi.org/10.1016/0044-8486(91)90258-9
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Investigation of Betanodavirus in Bivalve Mollusks in Turkey

Yıl 2022, , 415 - 425, 01.09.2022
https://doi.org/10.22392/actaquatr.1088276

Öz

Abstract: Viral nervous necrosis (VNN) is an important viral disease that is seen especially in larval and juvenile, occasionally in adult marine fish. VNN is now accepted as endemic in the Mediterranean basin and outbreaks in sea bream caused by RGNNV/SJNNV genotype have been isolated as well as the RGNNV genotype of betanodaviridae which causes frequent outbreaks. The aim of this study was to investigate the presence of the betanodavirus in carpet shell (Ruditapes decussatus) and black mussel (Mytilus galloprovencialis) stations approved by the official authorities in Turkey. A total of 50 samplings were carried out from five carpet shells and eight black mussel stations between 2016-2020. Sampling of carpet shells were conducted in August and black mussels in September by every year. Thirty samples were collected from each station, and a total of three hundred pools consisting of five samples each were produced. Samples prepared from the hepatopancreas of the bivalve mollusks were tested by Real-Time Reverse Transcriptase Polymerase Chain Reaction (RT-qPCR). Betanodavirus nucleic acid was not detected in any of carpet shell and black mussel samples. The presence of betanodavirus in bivalve mollusks in Turkey was investigated for the first time in this study. In conclusion, this study was conducted in only officially approved carpet shell and black mussel stations, however, since there were no officially approved stations in the Southern Aegean and Mediterranean regions, where the virus is more endemic, sampling was not conducted. Further and expanded studies are necessary including these regions to better understand the betanodavirus epidemiology in shellfish.

Kaynakça

  • Ahlquist, P., Noueiry, A. O., Lee, W. M., Kushner, D. B., & Dye, B. T. (2003). Host factors in positive-strand RNA virus genome replication. Journal of virology, 77(15), 8181–86. https://doi.org/10.1128/JVI.77.15.8181-8186.2003
  • Baeck, G. W., Gomez, D. K., Oh, K. S., Kim, J. H., Choresca, C. H., & Park, S. C. (2007). Detection of piscine Nodaviruses from apparently healthy wild marine fish in Korea. Bulletin of the European Association of Fish Pathologists, 27, 116–122.
  • Bandín, I., & Souto, S., (2020). Betanodavirus and VER Disease: A 30-year Research Review. Pathogens 9, 106. https://doi:10.3390/pathogens9020106
  • Barker, D. E., MacKinnon, A. M., Boston, L., Burt, M. D., Cone, D. K., Speare, D. J., Griffiths S, Cook M, Ritchie R, & Olivier, G. (2002). First report of piscine nodavirus infecting wild winter flounder Pleuronectes americanus in Passamaquoddy Bay, New Brunswick, Canada. Diseases of Aquatic Organisms, 49(2), 99-105. https://doi:10.3354/dao049099
  • Berzak, R., Scheinin, A., Davidovich, N., Regev, Y., Diga, R., Tchernov, D., & Morick, D. (2019). Prevalence of nervous necrosis virus (NNV) and Streptococcus species in wild marine fish and crustaceans from the Levantine Basin, Mediterranean Sea. Diseases of Aquatic Organisms, 133, 7-17. https://doi.org/10.3354/dao03339
  • Bitchava, K., Xylouri, E., Fragkiadaki, E., Athanassopoulou, F., Sabatakou, O., & Papanastassopoulou, M. (2007). First incidence of clinical signs of nodavirus infection in sea bream, Sparus auratus L. The Israeli Journal of Aquaculture, 59, 3–9.
  • Bitchava, K., Chassalevris, T., Lampou, E., Athanassopoulou, F., Economou, V., & Dovas, C. I. (2019). Occurrence and molecular characterization of betanodaviruses in fish and invertebrates of the Greek territorial waters. Journal of Fish Diseases, 42(12), 1773-1783. https://doi.org/10.1111/jfd.13098
  • Breuil, G., Bonami, J. R., Pepin, J. F., & Pichot, Y. (1991). Viral infection (picorna-like virus) associated with mass mortalities in hatchery-reared sea-bass (Dicentrarchus labrax) larvae and juveniles. Aquaculture, 97(2-3), 109-116. https://doi.org/10.1016/0044-8486(91)90258-9
  • Cai, D., Qiu, Y., Qi, N., Yan, R., Lin, M., Nie, D., Zhang, J., & Hu, Y. (2010). Characterization of Wuhan Nodavirus subgenomic RNA3 and the RNAi inhibition property of its encoded protein B2. Virus Research, 151(2), 153-161. https://doi.org/10.1016/j.virusres.2010.04.010
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  • Gomez, D. K., Sato, J., Mushiake, K., Isshiki, T., Okinaka, Y., & Nakai, T. (2004). PCR-based detection of betanodaviruses from cultured and wild marine fish with no clinical signs. Journal of Fish Diseases, 27, 603–608. https://doi.org/10.1111/j.1365-2761.2004.00577.x
  • Gomez, D. K., Lim, D. J., Baeck, G. W., Youn, H. J., Shin, N. S., Youn, H. Y., Hwang, C.Y., & Park, S. C. (2006). Detection of betanodaviruses in apparently healthy aquarium fishes and invertebrates. Journal of Veterinary Science, 7(4), 369-374. https://doi.org/10.4142/jvs.2006.7.4.369
  • Gomez, D. K., Baeck, G. W., Kim, J. H., Choresca, C. H. Jr, & Park, S. C. (2008a). Molecular detection of Betanodavirus in wild marine fish populations in Korea. Journal of Veterinary Diagnostic Investigation, 20, 38–44. https://doi.org/10.1177/104063870802000107
  • Gomez, D. K., Baeck, G. W., Kim, J. H., Choresca Jr, C. H., & Park, S. C. (2008b). Molecular detection of betanodaviruses from apparently healthy wild marine invertebrates. Journal of Invertebrate Pathology, 97(3), 197-202. https://doi.org/10.1016/j.jip.2007.10.012
  • Gomez, D. K., Baeck, G. W., Kim, J. H., Choresca, C. H. Jr, & Park, S. C. (2008c). Genetic analysis of betanodaviruses in subclinically infected aquarium fish and invertebrates. Current Microbiology, 56, 499–504. https://doi.org/10.1007/s00284-008-9116-x
  • Gomez, D. K., Matsuoka, S., Mori, K., Okinaka, Y., Park, S. C., & Nakai, T. (2009). Genetic analysis and pathogenicity of Betanodavirus isolated from wild redspotted grouper Epinephelus akaara with clinical signs. Archives of Virology, 154, 343–346. https://doi.org/10.1007/s00705- 008-0305-5
  • Gomez, D. K., Mori, K., Okinaka, Y., Nakai, T., & Park, S. C. (2010). Trash fish can be a source of betanodaviruses for cultured marine fish. Aquaculture, 302, 158–163. https://doi.org/10.1016/j.aquaculture.2010.02.033
  • Hata, N., Okinaka, Y., Iwamoto, T., Kawato, Y., Mori, K.-I., & Nakai, T. (2010). Identification of RNA regions that determine temperature sensitivities in betanodaviruses. Archives of Virology, 155, 1597–606. https://doi.org/10.1007/s00705-010-0736-7
  • He, M., Teng, C.B. (2015). Divergence and codon usage bias of Betanodavirus, a neurotropic pathogen in fish. Molecular Phylogenetics and Evolution, 83, 137–42. https://doi.org/10.1016/j.ympev.2014.11.016
  • Huang, B., Tan, C., Chang, S. F., Munday, B. L., Mathew, J. A., Ngoh, G. H., & Kwang, J. (2001). Detection of nodavirus in barramundi, Lates calcarifer (Bloch), using recombinant coat protein-based ELISA and RT-PCR. Journal of Fish Diseases, 24(3), 135-141. https://doi:10.1046/j.1365-2761.2001.00270.x
  • Johansen, R., Rove, S., Svendsen, A. K., Modahl, I., & Dannevig, B. (2004). A sequential study of pathological findigs in Atlantic halibut, Hippoglossus hippoglossus (L), throughout one year after an acute outbreak of viral encephalopathy and retinopathy. Journal of Fish Diseases, 27 (6), 327–341. https://doi.org/10.1111/j.1365-2761.2004.00548.x
  • Johnson, K. L., Price, B. D., & Ball, L. A. (2003). Recovery of infectivity from cDNA clones of nodamura virus and identification of small nonstructural proteins. Virology, 305(2), 436-451. https://doi.org/10.1006/viro.2002.1769
  • ICTV (2021). International Committee on Taxonomy of Viruses. https://talk.ictvonline.org/taxonomy/ Erişim: 11 Aralık 2021
  • Ito, Y., Okinaka, Y., Mori, K. I., Sugaya, T., Nishioka, T., Oka, M., & Nakai, T. (2008). Variable region of betanodavirus RNA2 is sufficient to determine host specificity. Diseases of Aquatic Organisms, 79(3), 199-205. https://doi.org/10.3354/dao01906
  • Iwamoto, T., Okinaka, Y., Mise, K., Mori, K. I., Arimoto, M., Okuno, T., & Nakai, T. (2004). Identification of host-specificity determinants in betanodaviruses by using reassortants between striped jack nervous necrosis virus and sevenband grouper nervous necrosis virus. Journal of Virology, 78(3), 1256-1262. https://doi.org/10.1128/JVI.78.3.1256-1262.2004
  • Iwamoto, T., Mise, K., Takeda, A., Okinaka, Y., Mori, K., Arimoto, M., Okuno, T., & Nakai, T. (2005). Characterization of striped jack nervous necrosis virus subgenomic RNA3 and biological activities of its encoded protein B2. Journal of General Virology, 86, 2807–16. https://doi.org/10.1099/vir.0.80902-0
  • Kalaycı, G., Özkan, B., Pekmez, K., & Kaplan, M. (2016, Ağustos 30 – Eylül 2). Levrek ve çipura kuluçkahanelerinde viral nervöz nekrozis hastalığının durumu (Poster sunum). XII. Veterinary Medicines Microbiology Congress with International Attendance, Kapadokya/Nevşehir.
  • Kaplan, M., & Karaoğlu, M. T. (2021). Investigation of betanodavirus in sea bass (Dicentrarchus labrax) at all production stages in all hatcheries and on selected farms in Turkey. Archives of Virology, 166, 3343-3356. https://doi.org/10.1007/s00705-021-05254-0
  • Kaplan, M., Pekmez, K., Özkan, B., Çağırgan, A. A., & Kalaycı, G. (2021). Detection of RGNNV genotype betanodavirus in the Black Sea and monitoring studies. Diseases of Aquatic Organisms, 144, 117-121. https://doi.org/10.3354/dao03583
  • Kaplan, M., Pekmez, K., Cagirgan, A. A., Arslan, F., Özkan, B., & Kalaycı, G. (2022). The first detection of betanodavirus reassortant genotype (RGNNV/SJNNV) isolated from gilthead sea bream (Sparus aurata) in the Turkish coastlines: The importance of screening and monitoring studies for identifying the source of the infection. Journal of Fish Diseases, 45(6), 783-793. https://doi.org/10.1111/jfd.13603
  • Kim, K. I., Kwon, W. J., Kim, Y. C., Kim, M. S., Hong, S., & Jeong, H. D. (2016). Surveillance of aquatic animal viruses in seawater and shellfish in Korea. Aquaculture, 461, 17–24. https://doi.org/10.1016/j.aquaculture.2016.03.053
  • Kim, Y. C., Kwon, W. J., Kim, M. S., Kim, K. I., Min, J. G., & Jeong, H. D. (2018). High prevalence of betanodavirus barfin flounder nervous necrosis virus as well as red‐spotted grouper nervous necrosis virus genotype in shellfish. Journal of Fish Diseases, 41(2), 233-246. https://doi.org/10.1111/jfd.12702
  • Liu, X. D., Huang, J. N., Weng, S. P., Hu, X. Q., Chen, W. J., Qin, Z. D., Dong, X. X., Liu, X. L., Zhou, Y., Asim, M., vd. (2015). Infections of nervous necrosis virus in wild and cage‐reared marine fish from South China Sea with unexpected wide host ranges. Journal of Fish Diseases, 38(6), 533-540. https://doi.org/10.1111/jfd.12265
  • Metcalf, T. G., Mullin, B., Eckerson, D., Moulton, E., & Larkin, E. P. (1979). Bioaccumulation and depuration of enteroviruses by the softshelled clam, Mya arenaria. Applied and Environmental Microbiology, 38, 275–282. https://doi.org/10.1128/aem.38.2.275-282.1979
  • Munday, B. L., Kwang, J., & Moody, N. (2002). Betanodavirus infections of teleost fish: a review. Journal of Fish Diseases, 25(3), 127–142. https://doi.org/10.1046/j.1365-2761.2002.00350.x
  • Nagai, T., & Nishizawa, T. (1999). Sequence of the non-structural protein gene encoded by RNA1 of striped jack nervous necrosis virus. Journal of General Virology, 80(11), 3019-3022. https://doi.org/10.1099/0022-1317-80-11-3019
  • Nishizawa, T., Mori, K. I., Furuhashi, M., Nakai, T., Furusawa, I., & Muroga, K. (1995). Comparison of the coat protein genes of five fish nodaviruses, the causative agents of viral nervous necrosis in marine fish. Journal of General Virology, 76(7), 1563-1569. https://doi.org/10.1099/0022-1317-76-7-1563
  • Olveira, J. G., Souto, S., Dopazo, C. P., Thiéry, R., Barja, J. L., & Bandín, I. (2009). Comparative analysis of both genomic segments of betanodaviruses isolated from epizootic outbreaks in farmed fish species provides evidence for genetic reassortment. Journal of General Virology, 90(12), 2940-2951. https://doi.org/10.1099/vir.0.013912-0
  • OIE, (2017). Manual of Diagnostic Tests for Aquatic Animals. Section 2.3. Diseases of Fish. Chapter 2.3.12 Viral encephalopathy and retinopathy http://www.oie.int/fileadmin/Home/eng/Health_standards/aahm/current/chapitre_viral_encephalopathy_retinopathy.pdf. Erişim: 10 Aralık 2021.
  • Özkan Özyer, B., Kalaycı, G., İnçoğlu, Ş., Pekmez, K., & Küçükali, Y. (2014). Türkiye’de kültürü yapılan levreklerden betanodavirus’un ilk izolasyonu. Bornova Veteriner Bililmler Dergisi, 36 (50), 13-17.
  • Panzarin, V., Patarnello, P., Mori, A., Rampazzo, E., Cappellozza, E., Bovo, G., Cattoli, G. (2010). Development and validation of a real-time TaqMan PCR assay for the detection of betanodavirus in clinical specimens. Archives of Virology, 155, 1193–1203. https://doi.org/10.1007/s00705-010-0701-5
  • Panzarin, V., Fusaro, A., Monne, I., Cappellozza, E., Patarnello, P., Bovo, G., Capua, I., Holmes, E. C., & Cattoli, G. (2012). Molecular epidemiology and evolutionary dynamics of betanodavirus in southern Europe. Infection, Genetics and Evolution, 12(1), 63-70. https://doi.org/10.1016/j.meegid.2011.10.007
  • Panzarin, V., Cappellozza, E., Mancin, M., Milani, A., Toffan, A., Terregino, C., & Cattoli, G. (2014). In vitro study of the replication capacity of the RGNNV and the SJNNV betanodavirus genotypes and their natural reassortants in response to temperature. Veterinary research, 45(1), 1-11. https://doi.org/10.1186/1297-9716-45-56
  • Panzarin, V., Toffan, A., Abbadi, M., Buratin, A., Mancin, M., Braaen, S., Olsen, C.M., Bargelloni, L., Rimstad, E., & Cattoli, G. (2016). Molecular basis for antigenic diversity of genus Betanodavirus. PloS one, 11(7), e0158814. https://doi.org/10.1371/journal.pone.0158814
  • Rippey, S. R. (1994). Infectious diseases associated with molluscan shellfish consumption. Clinical Microbiology Reviews, 7, 419–425. https://doi.org/10.1128/CMR.7.4.419
  • Sano, M., Nakai, T., & Fijan, N. (2011). Viral diseases and agents of warmwater fish. In: Fish Diseases and Disorders, Vol. 3: Viral, Bacterial and Fungal Infections, 2nd edition, Woo P.T.K & Bruno D.W., (pp. 166–244) eds. CABI.
  • Thiéry, R., Johnson, K.L., Nakai, T., Schneemann, A., Bonami, J.R., Lightner, D.Y. (2011). Family Nodaviridae. In: Virus Taxonomy Ninth Report of the International Committee on Taxonomy of Viruses, King A.M.Q., Adams M.J., Carstens E.B. and Lefkowitz E.J., (pp. 1061–1067). eds. Elsevier Academic Press.
  • Toffan, A., Pascoli, F., Pretto, T., Panzarin, V., Abbadi, M., Buratin, A., Quartesan, R., Gijón, D., & Padrós, F. (2017). Viral nervous necrosis in gilthead sea bream (Sparus aurata) caused by reassortant betanodavirus RGNNV/SJNNV: an emerging threat for Mediterranean aquaculture. Scientific Reports, 7(1), 1-12. https://doi.org/10.1038/srep46755
  • Toffolo, V., Negrisolo, E., Maltese, C., Bovo, G., Belvedere, P., Colombo, L., & Dalla Valle, L. (2007). Phylogeny of betanodaviruses and molecular evolution of their RNA polymerase and coat proteins. Molecular Phylogenetics and Evolution, 43(1), 298-308. https://doi.org/10.1016/j.ympev.2006.08.003
  • Vendramin, N., Patarnello, P., Toffan, A., Panzarin, V., Cappellozza, E., Tedesco, P., & Cattoli, G. (2013). Viral Encephalopathy and Retinopathy in groupers (Epinephelus spp.) in southern Italy: A threat for wild endangered species. BMC Veterinary Research, 9, 20. https://doi.org/10.1186/1746-6148-9-20
  • Volpe, E., Grodzki, M., Panzarin, V., Guercio, A., Purpari, G., Serratore, P., & Ciulli, S. (2018). Detection and molecular characterization of betanodaviruses retrieved from bivalve molluscs. Journal of Fish Diseases, 41(4), 603-611. https://doi.org/10.1111/jfd.12759
  • Volpe, E., Gustinelli, A., Caffara, M., Errani, F., Quaglio, F., Fioravanti, M. L., & Ciulli, S. (2020). Viral nervous necrosis outbreaks caused by the RGNNV/SJNNV reassortant betanodavirus in gilthead sea bream (Sparus aurata) and European sea bass (Dicentrarchus labrax). Aquaculture, 523, 735155. https://doi:10.1016/j.aquaculture.2020.735155
Toplam 60 adet kaynakça vardır.

Ayrıntılar

Birincil Dil Türkçe
Konular Yapısal Biyoloji
Bölüm Araştırma Makaleleri
Yazarlar

Murat Kaplan 0000-0002-2634-6478

Kemal Pekmez 0000-0001-7077-6582

Abdurrahman Anıl Çağırgan 0000-0001-7766-3150

Buket Özkan 0000-0003-3464-5651

Fatih Arslan 0000-0002-6706-3650

Bülent Kafa 0000-0002-1402-894X

Gülnur Kalaycı 0000-0002-2024-303X

Yayımlanma Tarihi 1 Eylül 2022
Yayımlandığı Sayı Yıl 2022

Kaynak Göster

APA Kaplan, M., Pekmez, K., Çağırgan, A. A., Özkan, B., vd. (2022). Türkiye’de Çift Kabuklu Yumuşakçalarda Betanodavirus Varlığının Araştırılması. Acta Aquatica Turcica, 18(3), 415-425. https://doi.org/10.22392/actaquatr.1088276