Case Report
BibTex RIS Cite

Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance

Year 2021, Volume: 74 Issue: 3, 365 - 369, 17.09.2021
https://doi.org/10.4274/atfm.galenos.2021.66376

Abstract

We report a boy carrying a recombinant chromosome 3, with deletion of 6.2 Mb from 3p26.3 to 3p26.1 and a duplication of 18.7 Mb from 3q26.33
to 3q29, resulting from a maternal pericentric inversion of the chromosome 3. He had delayed development, dysmorphic facial features, strabismus,
hirsutism, and he was operated for ventricular septal defect. Furthermore, we discuss genotype-phenotype correlation with similar cases reported
in the literature.

Ethical Statement

Informed Consent: Informed consent was obtained from the patients and/or their family/legal guardians. Peer-reviewed: Externally peer-reviewed. Authorship Contributions Data Collection or Processing: E.T., E.G.İ., Ş.A., A.C.C., Analysis or Interpretation: E.T., E.G.İ., Ş.A., A.C.C., T.T., Literature Search: E.T., Writing: E.T., T.T. Conflict of Interest: No conflict of interest was declared by the authors. Financial Disclosure: The authors declared that this study received no financial support.

Supporting Institution

-

Project Number

-

Thanks

-

References

  • 1. Chen CP, Su YN, Hsu CY, et al. Mosaic deletion-duplication syndrome of chromosome 3: prenatal molecular cytogenetic diagnosis using cultured and uncultured amniocytes and association with fetoplacental discrepancy. Taiwan J Obstet Gynecol. 2011;50:485-491.
  • 2. Iacoboni D, Kady N, Gregoire-Bottex M, et al. De novo duplication 3q in an infant with a vascular ring and features overlapping Cornelia de Lange phenotype. Case Reports in Clinical Medicine. 2013;2:48-52.
  • 3. Hu T, Desai JP. Soft-tissue material properties under large deformation: strain rate effect. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:2758-2761.
  • 4. Faas BH, De Vries BB, Van Es-Van Gaal J, et al. A new case of dup(3q) syndrome due to a pure duplication of 3qter. Clin Genet. 2002;62:315-320.
  • 5. Sims K, Mazzaschi RL, Payne E, et al. A rare chromosome 3 imbalance and its clinical implications. Case Rep Pediatr. 2012;2012:846564.
  • 6. Shuib S, McMullan D, Rattenberry E, et al. Microarray based analysis of 3p25-p26 deletions (3p- syndrome). Am J Med Genet A. 2009;149A:2099- 2105.
  • 7. Wellenreuther M, Bernatchez L. Eco-Evolutionary Genomics of Chromosomal Inversions. Trends Ecol Evol. 2018;33:427-440.
  • 8. Cunha KS, Simioni M, Vieira TP, et al. Tetrasomy 3q26.32-q29 due to a supernumerary marker chromosome in a child with pigmentary mosaicism of Ito. Genet Mol Biol. 2016;39:35-39.
  • 9. Dworschak GC, Crétolle C, Hilger A, et al. Comprehensive review of the duplication 3q syndrome and report of a patient with Currarino syndrome and de novo duplication 3q26.32-q27.2. Clin Genet. 2017;91:661-671.
  • 10. Abreu-González M, García-Delgado C, Cervantes A, et al. Clinical, Cytogenetic, and Biochemical Analyses of a Family with a t(3;13) (q26.2;p11.2): Further Delineation of 3q Duplication Syndrome. Case Rep Genet. 2013;2013:895259.
  • 11. Ireland M, English C, Cross I, et al. Partial trisomy 3q and the mild Cornelia de Lange syndrome phenotype. J Med Genet. 1995;32:837-838.
  • 12. Aqua MS, Rizzu P, Lindsay EA, et al. Duplication 3q syndrome: molecular delineation of the critical region. Am J Med Genet. 1995;55:33-37.
  • 13. Battaglia A, Novelli A, Ceccarini C, et al. Familial complex 3q;10q rearrangement unraveled by subtelomeric FISH analysis. Am J Med Genet A. 2006;140:144-150.
  • 14. Türkmen M, Kasap B, Soylu A, et al. Paracellin-1 gene mutation with multiple congenital abnormalities. Pediatr Nephrol. 2006;21:1776-1778.
  • 15. Rodríguez L, Bhatt SS, García-Castro M, et al. A unique case of a discontinuous duplication 3q26.1-3q28 resulting from a segregation error of a maternal complex chromosomal rearrangement involving an insertion and an inversion. Gene. 2014;535:165-169.
  • 16. Zhang S, Cui W. Sox2, a key factor in the regulation of pluripotency and neural differentiation. World J Stem Cells. 2014;6:305-311.
  • 17. Dietrich J, Lacagnina M, Gass D, et al. EIF2B5 mutations compromise GFAP+ astrocyte generation in vanishing white matter leukodystrophy. Nat Med. 2005;11:277-283.
  • 18. Nielsen J, Christiansen J, Lykke-Andersen J, et al. A family of insulin-like growth factor II mRNA-binding proteins represses translation in late development. Mol Cell Biol. 1999;19:1262-1270.
  • 19. Mills AA, Zheng B, Wang XJ, et al. p63 is a p53 homologue required for limb and epidermal morphogenesis. Nature. 1999;398:708-713.
  • 20. Higgins JJ, Pucilowska J, Lombardi RQ, et al. Candidate genes for recessive non-syndromic mental retardation on chromosome 3p (MRT2A). Clin Genet. 2004;65:496-500.
  • 21. Pohjola P, de Leeuw N, Penttinen M, et al. Terminal 3p deletions in two families--correlation between molecular karyotype and phenotype. Am J Med Genet A. 2010;152A:441-446.
  • 22. Fernandez T, Morgan T, Davis N, et al. Disruption of contactin 4 (CNTN4) results in developmental delay and other features of 3p deletion syndrome. Am J Hum Genet. 2004;74:1286-1293.
  • 23. Higgins JJ, Pucilowska J, Lombardi RQ, et al. A mutation in a novel ATPdependent Lon protease gene in a kindred with mild mental retardation. Neurology. 2004;63:1927-1931.
  • 24. Settembre C, Annunziata I, Spampanato C, et al. Systemic inflammation and neurodegeneration in a mouse model of multiple sulfatase deficiency. Proc Natl Acad Sci U S A. 2007;104:4506-4511.
  • 25. Gunnarsson C, Foyn Bruun C. Molecular characterization and clinical features of a patient with an interstitial deletion of 3p25.3-p26.1. Am J Med Genet A. 2010;152A:3110-3114.

Kromozom 3 Dengesizliği Olan Bir Olgunun Genotip Fenotip Korelasyonu

Year 2021, Volume: 74 Issue: 3, 365 - 369, 17.09.2021
https://doi.org/10.4274/atfm.galenos.2021.66376

Abstract

Maternal 3. kromozomdaki perisentrik inversiyon nedeniyle ortaya çıkan, 3p26.3-3p26.1 bölgesinde 6.2 Mb boyutunda delesyon, 3q26.33-3q29
bölgesinde ise 18.7 Mb boyutunda duplikasyona sahip rekombinant bir üçüncü kromozom taşıyan ve gelişme geriliği, dismorfik yüz bulguları,
strabismus, hirşutizm ile birlikte ventriküler septal defekt nedeniyle operasyon öyküsü bulunan bir olguyu literatürde bildirilen benzer olgular ile
genotip-fenotip korelasyonu yaparak sunuyoruz.

Ethical Statement

Informed Consent: Informed consent was obtained from the patients and/or their family/legal guardians. Peer-reviewed: Externally peer-reviewed. Authorship Contributions Data Collection or Processing: E.T., E.G.İ., Ş.A., A.C.C., Analysis or Interpretation: E.T., E.G.İ., Ş.A., A.C.C., T.T., Literature Search: E.T., Writing: E.T., T.T. Conflict of Interest: No conflict of interest was declared by the authors. Financial Disclosure: The authors declared that this study received no financial support.

Supporting Institution

-

Project Number

-

Thanks

-

References

  • 1. Chen CP, Su YN, Hsu CY, et al. Mosaic deletion-duplication syndrome of chromosome 3: prenatal molecular cytogenetic diagnosis using cultured and uncultured amniocytes and association with fetoplacental discrepancy. Taiwan J Obstet Gynecol. 2011;50:485-491.
  • 2. Iacoboni D, Kady N, Gregoire-Bottex M, et al. De novo duplication 3q in an infant with a vascular ring and features overlapping Cornelia de Lange phenotype. Case Reports in Clinical Medicine. 2013;2:48-52.
  • 3. Hu T, Desai JP. Soft-tissue material properties under large deformation: strain rate effect. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:2758-2761.
  • 4. Faas BH, De Vries BB, Van Es-Van Gaal J, et al. A new case of dup(3q) syndrome due to a pure duplication of 3qter. Clin Genet. 2002;62:315-320.
  • 5. Sims K, Mazzaschi RL, Payne E, et al. A rare chromosome 3 imbalance and its clinical implications. Case Rep Pediatr. 2012;2012:846564.
  • 6. Shuib S, McMullan D, Rattenberry E, et al. Microarray based analysis of 3p25-p26 deletions (3p- syndrome). Am J Med Genet A. 2009;149A:2099- 2105.
  • 7. Wellenreuther M, Bernatchez L. Eco-Evolutionary Genomics of Chromosomal Inversions. Trends Ecol Evol. 2018;33:427-440.
  • 8. Cunha KS, Simioni M, Vieira TP, et al. Tetrasomy 3q26.32-q29 due to a supernumerary marker chromosome in a child with pigmentary mosaicism of Ito. Genet Mol Biol. 2016;39:35-39.
  • 9. Dworschak GC, Crétolle C, Hilger A, et al. Comprehensive review of the duplication 3q syndrome and report of a patient with Currarino syndrome and de novo duplication 3q26.32-q27.2. Clin Genet. 2017;91:661-671.
  • 10. Abreu-González M, García-Delgado C, Cervantes A, et al. Clinical, Cytogenetic, and Biochemical Analyses of a Family with a t(3;13) (q26.2;p11.2): Further Delineation of 3q Duplication Syndrome. Case Rep Genet. 2013;2013:895259.
  • 11. Ireland M, English C, Cross I, et al. Partial trisomy 3q and the mild Cornelia de Lange syndrome phenotype. J Med Genet. 1995;32:837-838.
  • 12. Aqua MS, Rizzu P, Lindsay EA, et al. Duplication 3q syndrome: molecular delineation of the critical region. Am J Med Genet. 1995;55:33-37.
  • 13. Battaglia A, Novelli A, Ceccarini C, et al. Familial complex 3q;10q rearrangement unraveled by subtelomeric FISH analysis. Am J Med Genet A. 2006;140:144-150.
  • 14. Türkmen M, Kasap B, Soylu A, et al. Paracellin-1 gene mutation with multiple congenital abnormalities. Pediatr Nephrol. 2006;21:1776-1778.
  • 15. Rodríguez L, Bhatt SS, García-Castro M, et al. A unique case of a discontinuous duplication 3q26.1-3q28 resulting from a segregation error of a maternal complex chromosomal rearrangement involving an insertion and an inversion. Gene. 2014;535:165-169.
  • 16. Zhang S, Cui W. Sox2, a key factor in the regulation of pluripotency and neural differentiation. World J Stem Cells. 2014;6:305-311.
  • 17. Dietrich J, Lacagnina M, Gass D, et al. EIF2B5 mutations compromise GFAP+ astrocyte generation in vanishing white matter leukodystrophy. Nat Med. 2005;11:277-283.
  • 18. Nielsen J, Christiansen J, Lykke-Andersen J, et al. A family of insulin-like growth factor II mRNA-binding proteins represses translation in late development. Mol Cell Biol. 1999;19:1262-1270.
  • 19. Mills AA, Zheng B, Wang XJ, et al. p63 is a p53 homologue required for limb and epidermal morphogenesis. Nature. 1999;398:708-713.
  • 20. Higgins JJ, Pucilowska J, Lombardi RQ, et al. Candidate genes for recessive non-syndromic mental retardation on chromosome 3p (MRT2A). Clin Genet. 2004;65:496-500.
  • 21. Pohjola P, de Leeuw N, Penttinen M, et al. Terminal 3p deletions in two families--correlation between molecular karyotype and phenotype. Am J Med Genet A. 2010;152A:441-446.
  • 22. Fernandez T, Morgan T, Davis N, et al. Disruption of contactin 4 (CNTN4) results in developmental delay and other features of 3p deletion syndrome. Am J Hum Genet. 2004;74:1286-1293.
  • 23. Higgins JJ, Pucilowska J, Lombardi RQ, et al. A mutation in a novel ATPdependent Lon protease gene in a kindred with mild mental retardation. Neurology. 2004;63:1927-1931.
  • 24. Settembre C, Annunziata I, Spampanato C, et al. Systemic inflammation and neurodegeneration in a mouse model of multiple sulfatase deficiency. Proc Natl Acad Sci U S A. 2007;104:4506-4511.
  • 25. Gunnarsson C, Foyn Bruun C. Molecular characterization and clinical features of a patient with an interstitial deletion of 3p25.3-p26.1. Am J Med Genet A. 2010;152A:3110-3114.
There are 25 citations in total.

Details

Primary Language English
Subjects Medical Genetics (Excl. Cancer Genetics)
Journal Section Articles
Authors

Elifcan Taşdelen This is me

Project Number -
Publication Date September 17, 2021
Published in Issue Year 2021 Volume: 74 Issue: 3

Cite

APA Taşdelen, E. (2021). Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance. Ankara Üniversitesi Tıp Fakültesi Mecmuası, 74(3), 365-369. https://doi.org/10.4274/atfm.galenos.2021.66376
AMA Taşdelen E. Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance. Ankara Üniversitesi Tıp Fakültesi Mecmuası. September 2021;74(3):365-369. doi:10.4274/atfm.galenos.2021.66376
Chicago Taşdelen, Elifcan. “Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance”. Ankara Üniversitesi Tıp Fakültesi Mecmuası 74, no. 3 (September 2021): 365-69. https://doi.org/10.4274/atfm.galenos.2021.66376.
EndNote Taşdelen E (September 1, 2021) Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance. Ankara Üniversitesi Tıp Fakültesi Mecmuası 74 3 365–369.
IEEE E. Taşdelen, “Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance”, Ankara Üniversitesi Tıp Fakültesi Mecmuası, vol. 74, no. 3, pp. 365–369, 2021, doi: 10.4274/atfm.galenos.2021.66376.
ISNAD Taşdelen, Elifcan. “Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance”. Ankara Üniversitesi Tıp Fakültesi Mecmuası 74/3 (September 2021), 365-369. https://doi.org/10.4274/atfm.galenos.2021.66376.
JAMA Taşdelen E. Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance. Ankara Üniversitesi Tıp Fakültesi Mecmuası. 2021;74:365–369.
MLA Taşdelen, Elifcan. “Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance”. Ankara Üniversitesi Tıp Fakültesi Mecmuası, vol. 74, no. 3, 2021, pp. 365-9, doi:10.4274/atfm.galenos.2021.66376.
Vancouver Taşdelen E. Genotype Phenotype Correlation of A Case Having Chromosome 3 Imbalance. Ankara Üniversitesi Tıp Fakültesi Mecmuası. 2021;74(3):365-9.