Research Article

Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression

Volume: 22 Number: 3 September 30, 2026
EN

Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression

Abstract

High-yield recombinant protein expression is a critical requirement in biopharmaceutical development. The pET vector family is among the most widely used systems for protein production in Escherichia coli. Shilling et al. (2020) reported that insertion of a GAGA sequence within the T7lac promoter region of pET28a enhanced protein expression and suggested broad applicability across the pET plasmid family [1]. In this study, the GAGA sequence was introduced into pET16b and pET11a plasmids, and the expression performance of the original and modified vectors was evaluated using two recombinant proteins in BL21(DE3) and BL21(DE3) pLysS cells. The modified plasmids produced variable protein yield, depending on the vector–protein combination. However, elevated basal (leaky) expression was observed in BL21(DE3) cells carrying the modified plasmids. This undesired effect was eliminated in BL21(DE3) pLysS cells. These results indicate that the impact of GAGA modification is dependent on the plasmid backbone, target protein, and host strain. While the modification can improve expression yields, we cannot say it is universally beneficial across all pET-based expression systems.

Keywords

Supporting Institution

This project is partially supported by The Scientific and Technological Research Council of Türkiye (TÜBİTAK) project for HTS (Project no: 124S204).

Ethical Statement

Ethical approval was not required for this study because no human participants, human samples, animal subjects, or identifiable personal data were involved.

Thanks

The authors would like to acknowledge the Biotechnology and Bioengineering Research and Application Centre (BIYOMER) at Izmir Institute of Technology for SDS-PAGE gel imaging.

References

  1. [1]. Shilling, PJ, Mirzadeh, K, Cumming, AJ, Widesheim, M, Köck, Z, Daley, DO. 2020. Improved designs for pET expression plasmids increase protein production yield in Escherichia coli. Communications Biology; 3(1). doi: 10.1038/S42003-020-0939-8.
  2. [2]. Chander, D, Koul, D, Tickoo, A, Chaubey, A. 2025. Advancing recombinant protein production by bacteria: strategies and challenges in heterologous systems. Current Research in Biotechnology; 10: 100342. doi: 10.1016/J.CRBIOT.2025.100342.
  3. [3]. Rosano, GL, Morales, ES, Ceccarelli, EA. 2019. New tools for recombinant protein production in Escherichia coli: A 5‐year update. Protein Science; 28(8): 1412. doi: 10.1002/PRO.3668.
  4. [4]. Studier, FW. 1991. Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. Journal of Molecular Biology; 219(1): 37–44. doi: 10.1016/0022-2836(91)90855-Z.
  5. [5]. Rosenberg, AH, Lade, BN, Dao-shan, C, Lin, SW, Dunn, JJ, Studier, FW. 1987. Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene; 56(1): 25–135. doi: 10.1016/0378-1119(87)90165-X.
  6. [6]. Studier, FW, Rosenberg, AH, Dunn, JJ, Dubendorff, JW. 1990. Use of T7 RNA polymerase to direct expression of cloned genes. Methods in Enzymology; 185(C): 60–89. doi: 10.1016/0076-6879(90)85008-C.
  7. [7]. Dubendorf, JW, Studier, FW. 1991. Controlling basal expression in an inducible T7 expression system by blocking the target T7 promoter with lac repressor. Journal of Molecular Biology; 219(1): 45–59. doi: 10.1016/0022-2836(91)90856-2.
  8. [8]. Lopez, PJ, Guillerez, J, Sousa, R, Dreyfus, M. 1997. The low processivity of T7 RNA polymerase over the initially transcribed sequence can limit productive initiation in vivo. Journal of Molecular Biology; 269(1): 41–51. doi: 10.1006/jmbi.1997.1039.

Details

Primary Language

English

Subjects

Biomedical Sciences and Technology

Journal Section

Research Article

Publication Date

September 30, 2026

Submission Date

June 16, 2026

Acceptance Date

August 12, 2026

Published in Issue

Year 2026 Volume: 22 Number: 3

APA
Tufekci, M., & Taşkent Sezgin, H. (2026). Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression. Celal Bayar University Journal of Science, 22(3), 627-643. https://doi.org/10.18466/cbayarfbe.1972378
AMA
1.Tufekci M, Taşkent Sezgin H. Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression. CBUJOS. 2026;22(3):627-643. doi:10.18466/cbayarfbe.1972378
Chicago
Tufekci, Mert, and Hümeyra Taşkent Sezgin. 2026. “Effect of Improved PET Plasmids on Protein Expression Yield and Basal Expression”. Celal Bayar University Journal of Science 22 (3): 627-43. https://doi.org/10.18466/cbayarfbe.1972378.
EndNote
Tufekci M, Taşkent Sezgin H (September 1, 2026) Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression. Celal Bayar University Journal of Science 22 3 627–643.
IEEE
[1]M. Tufekci and H. Taşkent Sezgin, “Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression”, CBUJOS, vol. 22, no. 3, pp. 627–643, Sept. 2026, doi: 10.18466/cbayarfbe.1972378.
ISNAD
Tufekci, Mert - Taşkent Sezgin, Hümeyra. “Effect of Improved PET Plasmids on Protein Expression Yield and Basal Expression”. Celal Bayar University Journal of Science 22/3 (September 1, 2026): 627-643. https://doi.org/10.18466/cbayarfbe.1972378.
JAMA
1.Tufekci M, Taşkent Sezgin H. Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression. CBUJOS. 2026;22:627–643.
MLA
Tufekci, Mert, and Hümeyra Taşkent Sezgin. “Effect of Improved PET Plasmids on Protein Expression Yield and Basal Expression”. Celal Bayar University Journal of Science, vol. 22, no. 3, Sept. 2026, pp. 627-43, doi:10.18466/cbayarfbe.1972378.
Vancouver
1.Mert Tufekci, Hümeyra Taşkent Sezgin. Effect of Improved pET Plasmids on Protein Expression Yield and Basal Expression. CBUJOS. 2026 Sep. 1;22(3):627-43. doi:10.18466/cbayarfbe.1972378