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2,6-DİMETOKSİBENZOİK ASİT VE TÜREVLERİNİN YAPISAL, KONFORMASYONEL ANALİZ, ELEKTRONİK, LİNEER VE LİNEER OLMAYAN OPTİK ÖZELLİKLERİ ÜZERİNE HESAPLAMALI ÇALIŞMA

Year 2018, Volume: 5 Issue: 1, 1 - 12, 25.07.2018

Abstract

Benzoik asit ve türevleri anti-trombotik ajanlar olarak kullanılmakla birlikte (Yun-Choi et al., 1996) antimikotik etkilerinden ve çok çeşitli tümör hücrelerine karşı sitotoksik etkilerinden dolayı tıp alanındaki araştırmalarda büyük ilgi duyulmaktadır (You et al., 2004). Benzoat türevlerinin çam kurdu zehri olarak kullanılmasının yanı sıra alüminyum, çinko ve bakır gibi farklı metallerde korozyon önleyici özellikleri nedeniyle kullanıldığı bilinmektedir. Ayrıca, bunların gıda maddeleri, kişisel bakım ürünleri ve tıbbi malzemeler için emülgatörler olarak uygulanabileceği ve bazı antimikrobiyal ve böcek öldürücü aktivitelere sahip olduğunu literatürde görebilmekteyiz (Habulin et al., 2008; Qadeer et al., 2007; Saleem et al., 2008). Ester türevleri, tıbbi kimya (Manjinder et al., 2002; Tandon et al., 2002), kiral kaynaklar (Kim et al., 2007; Somlai et al., 2003; Tomasz et al., 2002) ve polimer materyalleri (Atsushi et al., 2003; Pollini et al., 2005) gibi çeşitli alanlarda kullanılmasının yanı sıra 1,2,4-triazol, 1,3,4- tiadiazoller (Khan et al., 2010) ve 1,3,4-oksadiazolleri (Syed et al., 2011) gibi biyoloji açısından önem arz eden heterosiklik bileşiklerin sentezinde kullanılır. Çalışılan moleküllerden 2,6- dimetoksibenzoik asit (Azzena et al., 1990; Portalone, 2009; Portalone, 2011), etil 2,6- dimetoksibenzoat (Khan et al., 2012) moleküllerinin sentezleri yapılarak X-ışınları kırınım metodu ile kristal yapıları ve 1H-NMR, 13C-NMR, FT-IR analizleri belirlenmiştir. Ayrıca, 2,6- dimetoksibenzohidrazid (Qadeer et al., 2007) molekülü sentezlenerek X-ışınları kırınım metodu ile aydınlatılmıştır. Bu çalışmada, I, II, III ve IV moleküllerinin deneysel olarak belirlenen parametreleri desteklemek ve belirlenmeyen konformasyon analizini, nonlineer optik ve elektronik özelliklerini belirlemek amacıyla bilgisayar destekli kuantum kimyasal hesaplamalar ve moleküler modelleme programları kullanılmıştır. Bu çalışmada incelenen moleküllerin kimyasal yapıları Şekil 1’de verilmiştir.

References

  • Atsushi N, Toyoharu M, Hiroto K, Takeshi E, 2003. Controlled cationic ring-opening polymerization of 1,3-oxazolidine-2-thione derived from L-Serine. Macromolecules, 36: 9335–9339.
  • Azzena U, Denurra T, Melloni G, Piroddi AM, 1990.Regioselective reductive electrophilic substitution of 1,2,3-trimethoxybenzene and ıts 5-alkyl-substituted homologues.Journal of Organic Chemistry,55: 5386-5390.
  • Becke AD, 1988. Density-functional exchange-energy approximation with correct asymptotic behavior. PhysicalReview A,38: 3098-3100.
  • Dennington R, Keith T, Millam J, 2009. Semichem Inc., GaussView, Version 5, Shawnee Mission KS,.
  • Franck MM, Pietro WJ, Hehre WJ, Binkley JS,. Gordon MS, DeFrees DJ, Pople JA, 1982. Self‐consistent molecular orbital methods. XXIII. A polarization‐type basis set for second‐row elements. ChemicalPhysics, 77: 3654-3665.
  • Gaussian 09, Revision B.01, 2010.Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Mennucci B, Petersson GA, Nakatsuji H, Caricato M, Hratchian XLiHP, Izmaylov AF, Bloino J, Zheng G, Sonnenberg JL, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery JA, Peralta JrJ.E, Ogliaro F, Bearpark M, Heyd JJ, Brothers E, Kudin KN, Staroverov VN, Keith T, Kobayashi R, Normand J, Raghavachari K, Rendell A, Burant JC, Iyengar SS, Tomasi J, Cossi M, Rega N, Millam JM, Klene M, Knox JE, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Martin RL, Morokuma K, Zakrzewski VG, Voth GA, Salvador P, Dannenberg JJ, Dapprich S, Daniels AD, Farkas O, Foresman JB, Ortiz JV, Cioslowski J, Fox DJ, Gaussian, Inc., Wallingford CT.
  • Habulin M, Sabeder S, Knez Z, 2008. Enzymatic synthesis of sugar fatty acid esters in organic solvent and in supercritical carbon dioxide and their antimicrobial activity. Journal of Supercritical Fluids, 45: 338–345.
  • Khan I, Ibrar A, White JM, 2012.Ethyl 2,6-Dimethoxybenzoate: Synthesis, Spectroscopic and X-ray Crystallographic Analysis. Crystals, 2: 521-527.
  • Khan I, Ali S, Hameed S, Rama NH, Hussain MT, Wadood A, Uddin R, Haq ZU, Khan A, Ali S, Choudhary MI, 2010. Synthesis, antioxidant activities and urease inhibition of some new 1,2,4-triazole and 1,3,4-thiadiazole derivatives. European Journal of Medicinal Chemistry, 45: 5200–5207.
  • Kim J, Kim J, Song S, Jung O, Suh H, 2007. Enantiomeric recognition of d- and l-amino acid methyl ester hydrochlorides by new chiral bis-pyridino-18-crown-6 substituted with urea, and diphenyl groups. Journal of inclusion phenomena and macrocyclic chemistry, 58: 187–192.
  • Krishnan R, Binkley JS, Seeger R,Pople JA, 1980. Self-consistent molecular-orbital methods. 20. basis set for correlated wave-functions.Journal of Chemical Physics, 72: 650–654.
  • Lee CT, Yang WT,Parr RG, (1988) Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Physical Review B, 37, 785-789.
  • Manjinder SL, Yeeman KR, Michael NGJ, John CV, 2002. Serine and Threonine β-Lactones: A New Class of Hepatitis A Virus 3C Cysteine Proteinase Inhibitors. The Journal of Organic Chemistry, 67: 1536–1547.
  • McLean AD, Chandler GS, 1980. Contracted Gaussian basis sets for molecular calculations. I. Second row atoms, Z= 11–18. Journal of Chemical Physics,72: 5639–5648.
  • Moller C, Plesset MS, 1934. Note on an approximation treatment for many-electron systems. Physical Review, 46: 618-622.
  • Pollini G, Baricordi N, Benetti S, De Risi C, Zanirato VA, 2005. Simple entry to chiral nonracemic 2-piperazinone derivatives. Tetrahedron Letters, 46: 3699–3701.
  • Portalone G, 2011. A new polymorph of 2,6-dimethoxybenzoic acid. Acta Crystallographica Section E, 67: 03394-03395.
  • Portalone G, 2009. Redetermination of 2,6-dimethoxybenzoic acid. Acta Crystallographica Section E, 65: 0327-0328.
  • Qadeer G, Rama NH, Malik MA, 2007. Helliwell M, Methyl 2,6-dimethoxybenzoate. Acta Crystallographica Section E, 63: 3027-3027.
  • Qadeer G, Rama NH, Chen WT,2007. 2,6-Dimethoxybenzohydrazide. Acta Crystallographica Section E, 63: 02892.
  • Saleem R, Qadeer G, Shabir G, Hanif M, Wong WY, 2008. Methyl 2-[2-(2,6- dichloroanilino)phenyl]acetate. Acta Crystallogr E, 64: o2400.

2,6-DİMETOKSİBENZOİK ASİT VE TÜREVLERİNİN YAPISAL, KONFORMASYONEL ANALİZ, ELEKTRONİK, LİNEER VE LİNEER OLMAYAN OPTİK ÖZELLİKLERİ ÜZERİNE HESAPLAMALI ÇALIŞMA

Year 2018, Volume: 5 Issue: 1, 1 - 12, 25.07.2018

Abstract

In this study, quantum chemistry calculations have been performed to determine the ground state geometry optimization, energy, the dipole moment (μ), mean polarizability (α), the total first static hyperpolarizability (β), highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) of 2,6-dimethoxybenzoic acid (I), 2,6- dimethoxybenzamide (II), 2,6-dimethoxybenzohydrazide (III) and ethyl 2,6- dimethoxybenzoate (IV) molecules using ab initio Hartree-Fock (HF) and Density Functional Theory (DFT/B3LYP) with the 6-311++G (d, p) basis set. 1H and 13C Nuclear Magnetic Resonance (NMR) chemical shifts calculations have been performed by using the DFT/B3LYP/6-311+G(2d,p) and HF/6-31G(d) methods. In addition, using the calculated the highest occupied molecular orbital energies (EHOMO) and the lowest unoccupied molecular orbital energies (ELUMO), electronic properties of the studied molecules such as energy gap (∆E=ELUMO-EHOMO), chemical potential μ, electrophilic index ω, ionization potential IP, electron affinity EA, electronegativity χ, molecular softness S, molecular hardness η were obtained. The dipole moment value of I molecule was the highest the dipole moment values in the studied molecules. Structural values of these molecules compared with data in the literature From the calculation results, it is seen that there is a good fit between the observed and calculated geometric parameters

References

  • Atsushi N, Toyoharu M, Hiroto K, Takeshi E, 2003. Controlled cationic ring-opening polymerization of 1,3-oxazolidine-2-thione derived from L-Serine. Macromolecules, 36: 9335–9339.
  • Azzena U, Denurra T, Melloni G, Piroddi AM, 1990.Regioselective reductive electrophilic substitution of 1,2,3-trimethoxybenzene and ıts 5-alkyl-substituted homologues.Journal of Organic Chemistry,55: 5386-5390.
  • Becke AD, 1988. Density-functional exchange-energy approximation with correct asymptotic behavior. PhysicalReview A,38: 3098-3100.
  • Dennington R, Keith T, Millam J, 2009. Semichem Inc., GaussView, Version 5, Shawnee Mission KS,.
  • Franck MM, Pietro WJ, Hehre WJ, Binkley JS,. Gordon MS, DeFrees DJ, Pople JA, 1982. Self‐consistent molecular orbital methods. XXIII. A polarization‐type basis set for second‐row elements. ChemicalPhysics, 77: 3654-3665.
  • Gaussian 09, Revision B.01, 2010.Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Mennucci B, Petersson GA, Nakatsuji H, Caricato M, Hratchian XLiHP, Izmaylov AF, Bloino J, Zheng G, Sonnenberg JL, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery JA, Peralta JrJ.E, Ogliaro F, Bearpark M, Heyd JJ, Brothers E, Kudin KN, Staroverov VN, Keith T, Kobayashi R, Normand J, Raghavachari K, Rendell A, Burant JC, Iyengar SS, Tomasi J, Cossi M, Rega N, Millam JM, Klene M, Knox JE, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Martin RL, Morokuma K, Zakrzewski VG, Voth GA, Salvador P, Dannenberg JJ, Dapprich S, Daniels AD, Farkas O, Foresman JB, Ortiz JV, Cioslowski J, Fox DJ, Gaussian, Inc., Wallingford CT.
  • Habulin M, Sabeder S, Knez Z, 2008. Enzymatic synthesis of sugar fatty acid esters in organic solvent and in supercritical carbon dioxide and their antimicrobial activity. Journal of Supercritical Fluids, 45: 338–345.
  • Khan I, Ibrar A, White JM, 2012.Ethyl 2,6-Dimethoxybenzoate: Synthesis, Spectroscopic and X-ray Crystallographic Analysis. Crystals, 2: 521-527.
  • Khan I, Ali S, Hameed S, Rama NH, Hussain MT, Wadood A, Uddin R, Haq ZU, Khan A, Ali S, Choudhary MI, 2010. Synthesis, antioxidant activities and urease inhibition of some new 1,2,4-triazole and 1,3,4-thiadiazole derivatives. European Journal of Medicinal Chemistry, 45: 5200–5207.
  • Kim J, Kim J, Song S, Jung O, Suh H, 2007. Enantiomeric recognition of d- and l-amino acid methyl ester hydrochlorides by new chiral bis-pyridino-18-crown-6 substituted with urea, and diphenyl groups. Journal of inclusion phenomena and macrocyclic chemistry, 58: 187–192.
  • Krishnan R, Binkley JS, Seeger R,Pople JA, 1980. Self-consistent molecular-orbital methods. 20. basis set for correlated wave-functions.Journal of Chemical Physics, 72: 650–654.
  • Lee CT, Yang WT,Parr RG, (1988) Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Physical Review B, 37, 785-789.
  • Manjinder SL, Yeeman KR, Michael NGJ, John CV, 2002. Serine and Threonine β-Lactones: A New Class of Hepatitis A Virus 3C Cysteine Proteinase Inhibitors. The Journal of Organic Chemistry, 67: 1536–1547.
  • McLean AD, Chandler GS, 1980. Contracted Gaussian basis sets for molecular calculations. I. Second row atoms, Z= 11–18. Journal of Chemical Physics,72: 5639–5648.
  • Moller C, Plesset MS, 1934. Note on an approximation treatment for many-electron systems. Physical Review, 46: 618-622.
  • Pollini G, Baricordi N, Benetti S, De Risi C, Zanirato VA, 2005. Simple entry to chiral nonracemic 2-piperazinone derivatives. Tetrahedron Letters, 46: 3699–3701.
  • Portalone G, 2011. A new polymorph of 2,6-dimethoxybenzoic acid. Acta Crystallographica Section E, 67: 03394-03395.
  • Portalone G, 2009. Redetermination of 2,6-dimethoxybenzoic acid. Acta Crystallographica Section E, 65: 0327-0328.
  • Qadeer G, Rama NH, Malik MA, 2007. Helliwell M, Methyl 2,6-dimethoxybenzoate. Acta Crystallographica Section E, 63: 3027-3027.
  • Qadeer G, Rama NH, Chen WT,2007. 2,6-Dimethoxybenzohydrazide. Acta Crystallographica Section E, 63: 02892.
  • Saleem R, Qadeer G, Shabir G, Hanif M, Wong WY, 2008. Methyl 2-[2-(2,6- dichloroanilino)phenyl]acetate. Acta Crystallogr E, 64: o2400.
There are 21 citations in total.

Details

Primary Language Turkish
Journal Section Caucasian Journal of Science
Authors

Güventürk Uğurlu 0000-0003-4171-7879

Publication Date July 25, 2018
Submission Date January 26, 2018
Acceptance Date August 20, 2018
Published in Issue Year 2018 Volume: 5 Issue: 1

Cite

APA Uğurlu, G. (2018). 2,6-DİMETOKSİBENZOİK ASİT VE TÜREVLERİNİN YAPISAL, KONFORMASYONEL ANALİZ, ELEKTRONİK, LİNEER VE LİNEER OLMAYAN OPTİK ÖZELLİKLERİ ÜZERİNE HESAPLAMALI ÇALIŞMA. Caucasian Journal of Science, 5(1), 1-12.

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