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The variations of carbonic anhdrase in species of the genera of $Mus$ Linnaeus, 1758 and $Rattus$ Fischer, 1803 (Mammalia: Rodentia) in the line of Ankara - Zonguldak provinces

Year 2024, , 55 - 66, 14.06.2024
https://doi.org/10.53447/communc.1359092

Abstract

Carbonic anhydrase ($CA_{1}$) enzyme variations of one hundred and forty six specimens of $Mus~ domesticus$, $Mus~ macedonicus$ (House mice) and one hundred and twenty specimens of $Rattus~ rattus$ (Roof rat) and $Rattus~ norvegicus$ (Brown rat) were examined by the field work conducted in 23 localities in the line of Ankara-Bolu Zonguldak. It was determined that $CA_{1}$ was fixed to two different homozygous alleles in both house mouse species. In the roof rat samples, $CA_{1}$ was fixed to two homozygous alleles at different frequencies in two groups formed according to the colour of the back fur. A single homozygous allele was detected at the $CA_{1}$ locus of brown rat samples. It was observed that these four species were separated in the UPGMA tree made according to allele frequencies. In this respect, it was evaluated that $CA_{1}$ could be a molecular marker that can be used to distinguish these species.

References

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  • Kosoy, M., Khlyap, L., Cosson, J.F., Morand, S., Aboriginal and invasive rats of genus Rattus as hosts of infectious agents. Vector-Borne and Zoonotic Diseases, 5 (1) (2015), 3-12. https://doi.org/10.1089/vbz.2014.1629
  • Vohrálík, V., Sofianidov, T.S., Frynta, D., Reproduction in Mus macedonicus (Mammalia: Rodentia) in the Balkans. Bonner Zoologische Beitrage, 47 (3-4) (1998), 283-292.
  • Kryśtufek, B., Machalon, M., Morphological differentiation in Mus spicilegus and the taxonomic status of mound-building from the Adriatic coast of Yugoslavia. Journal of Zoology, 245(2) (1998), 185-196. https://doi.org/10.1111/j.1469-7998.1998.tb00086.x
  • Özkan, B., Invasive coypus, Myocastor coypus (Molina; 1782) in European part of Turkey. Israel Journal of Zoology, 45 (1999), 289- 291.
  • Özkan, B., Krystufek, B., Wood mice, Apodemus of two Turkish islands: Gökçeada and Bozcaada. Folia Zoologica, 48 (1) (1999), 17-24.
  • Kryštufek, B., Vohralík, V., Mammals of Turkey and Cyprus. Introduction, Checklist, Insectivora, Knjižnica Annales Majora, Koper, 2001.
  • Gözcelioğlu, B., Çolak, R., Çolak, E., Yiğit, N., A Study on Mus domesticus Rutty, 1772 and Mus macedonicus Petrov and Ruzíc, 1983 (Mammalia: Rodentia) Distributed along the Line of Ankara, Bolu and Zonguldak. Turkish Journal of Zoology, 29 (2) (2005), 133-140.
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  • Bonhomme, F., Catalan, J., Gerasimov, S., Orsini, Ph., Thaler, L., Le complexe d’espèces du genre Mus en Europe Centrale et Orientale I. Génétique. Zeitschrift für Säugetierkunde, 48 (1983), 78-85.
  • Bonhomme, F., Catalan, J., Davidian, J. B., Chapman, M.V., Moriwaki, K., Nevo, E., Thaler, L., Biochemical diversity and evolution in the Genus Mus. Biochemical Genetics, 22 (3/4) (1984), 275-303. https://doi.org/10.1007/BF00484229
  • Awasthi, M., Bhat, K.V., Anand, R.K., Allozymic variation in four Indian species of Genus Mus: a comparative analysis. Journal of Genetics, 78 (1999), 73-80. https://doi.org/10.1007/BF02924558
  • Mezhzherin, S.V., Kotenkova, E.V., Mikhailenko, A.G., The house mice, Mus musculus s. I., hybrid zone of Transcaucasus. Zeitschrift für Säugetierkunde, 63 (1998), 54-168.
  • Misonne, X., Mammiferes de la Turquie sub-orientale et du nord de la Syrie. Mammalia, 21 (1957), 53-67. https://doi.org/10.1515/mamm.1957.21.1.53
  • Bodenheimer, F.S., The present taxonomic status of the terrestrial mammals of Palestine. Bulletin of the Research Council of Israel B, 7 (1958), 165-190.
  • Hatt, R.T., The Mammals of Iraq. Miscellaneous Publication of the Museum of Zoology, University of Michigan, USA, 1959.
  • Ondrias, J.C., The taxanomy and geographical distribution of the rodents of Greece. Saugetierkundliche Mitteilungen, 14 (1966), 1- 136.
  • Lay, D.M., A study of the mammals of Iran, resulting from the street expedition of 1962-1963. Fieldiana Zoology, 54 (1967), 1-282.
  • Yiğit, N., Çolak, E., Sözen, M., Özkurt, Ş., The taxonomy and karyology of Rattus norvegicus (Berkenhout, 1769) and Rattus rattus (Linnaeus, 1758) (Rodentia:Muridae) in Turkey. Turkish Journal of Zoology, 22 (1998), 203-212.
  • Yiğit, N., Verimli, R., Çolak, E., Sözen, M., Özkurt, Ş., Blood-serum proteins of Rattus rattus and Rattus
  • Yiğit, N., Çolak, E., Kandemir, İ., Kankılıç, T., Çolak, R., Allozyme variation in Rattus rattus (Rodentia: Muridae) in Turkey, with particular emphasis on the taxonomy. Zoology in the Middle East, 45 (1) (2008), 19-28. https://doi.org/10.1080/09397140.2008.10638302
  • Yiğit, N., Çolak, E., Özkurt, Ş., Özlük, A., Çolak, R., Gül, N., Saygılı, F., Yüce. D., Allozyme variation in wild rats Rattus norvegicus (Berkenhout, 1769) (Mammalia: Rodentia) from Turkey. Acta Zoologica Bulgarica, 62 (1) (2010), 79-88.
  • Baydemir, N.A., Chromosomal polymorphism of Rattus rattus (Linnaeus, 1758) (rodentia: muridae) in Central Anatolia, Folia biologica (Kraków), 59 (1-2) (2011), 31-34. https://doi.org/10.3409/fb59_1-2.31-34
  • Kankılıç, T., Yiğit, N., Kankılıç, T., Chromosomal polymorphism in Thracian populations of Rattus rattus (Linnaeus, 1758) (Rodentia: Muridae). Turkish Journal of Zoology, 30 (3) (2006), 319-327.
  • Çolak R., Yiğit N., Çolak E., Sözen M., Özkurt Ş., Nonspecific esterase patterns of Rattus norvegicus (Berkenhout, 1769) in Western Turkey, Turkish Journal of Biology, 24 (4) (2000), 825-832.
  • Augustinsson, K. B., Henricson, B., A genetically controlled esterase in rat plasma. Biochimica et Biophysica Acta (BBA)-General Subjects, 124 (1966), 323-331. https://doi.org/10.1016/0304-4165(66)90195-4
  • Carter, N., Parr, C., Phosphogluconate dehydrogenase polymorphism in British wild rats. Nature, 224 (5225) (1969). https://doi.org/10.1038/2241214a0
  • Gasser, L.D., Silvers, W.K., Reynolds H.M., Black, G., Palm, J., Serum esterase genetics in rats: Two new alleles at Es-2, a new esterase regulated by hormonal factors, and linkage of these loci to the Ag-C blood group locus. Biochemical Genetics, 10 (3) (1973), 207-217. https://doi.org/10.1007/BF00485699
  • Marin-Jimenez, D., Enzyme inheritance in the laboratory rat. The journal of Heredity, 65 (1974), 235-237. https://doi.org/10.1093/oxfordjournals.jhered.a108512
  • Matsumoto, K., Syuto, B., Miyake, Y., Matsuhashi, A., Aizawa, M., Serum esterase genetics: identification and hormone induction of the Es-1b esterase in inbred rats. Biochemical Genetics, 17 (11-12) (1979), 1121-1130. https://doi.org/10.1007/BF00504349
  • Kendall, B., Glucose phosphate dehydrogenase polymorphism and the genetics of linkage group II in the Norway rat (Rattus norvegicus). Laboratory animals, 19 (1985), 169-172. https://doi.org/10.1258/002367785780893502
  • Samollow, P.B., Vandeberg, J.L., Ford, A.L., Kunz, H.W., Gill, T.J., Genetic analysis of liver neuraminidase isozymes in Rattus norvegicus: independent control of Neu-1 and Neu-2 phenotypes. Genetics, 114 (1986), 247-258. https://doi.org/10.1093/genetics/114.1.247
  • Baverstock, P.R., Adams, M., Maxon, L.R., Yosida, T.H., Genetic differentiation among karyotypic forms of black rat, Rattus rattus. Genetics, 105 (1983), 969-983. https://doi.org/10.1093/genetics/105.4.969
  • Baverstock, P.R., Adams, M., Watts, S.H.C., Biochemical differentiation among karyotypic forms of Australian Rattus. Genetica, 71 (1986), 11-22. https://doi.org/10.1007/BF00123228
  • Cramer, D.V., Chakravarti, A., Arenas, O., Humprieres, J., Mowery, P.A., Genetic diversity within and between natural populations of Rattus norvegicus. Journal of heredity, 79 (1988), 319-324. https://doi.org/10.1093/oxfordjournals.jhered.a110522
  • Skidmore, A.F., Beebee T.J.C., Changes in testicular lactate dehydrogenase of the rat (Rattus norvegicus) during growth and development. Comparative Biochemistry and physiology. B, Comparative Biochemistry, 98 (2/3) (1991), 279-282. https://doi.org/10.1016/0305-0491(91)90179-h
  • Yamada, T., Moralejo, D., Tsuchiya, K., Agui, T., Matsumoto, K., Biochemical polymorphisms in wild rats (Rattus norvegicus) captured in Oita city, Japan. Journal of Veterinary Medical Science, 55 (4) (1993), 673-675. https://doi.org/10.1292/jvms.55.673
  • Günther E., Walter L., The major histocompatibility complex of the rat (Rattus norvegicus). Immunogenetics, 53 (2001), 520-542. https://doi.org/10.1007/s002510100361
  • Rothe, G.M., Electrophoresis of Enzymes, Laboratory Methods, Springer Verlag, Berlin, 1994.
  • Shaw, C.R., Prasad, R., Starch gel electrophoresis of enzymes—A compilation of recipes. Biochemical Genetics, 4 (1970), 297-320. https://doi.org/10.1007/BF00485780
  • Harris, H., Hopkinson, D.A., Handbook of Enzyme Electrophoresis in Human Genetics, North-Holland Publishing Company, Amsterdam, 1976.
  • Russell, P.J., Genetics, The Benjamin/Cummings Publishing Company Inc., Michigan University, 1998.
  • Auffray, J.C., Tchernov, E., Bonhomme, F., Heth, G., Simson, S., Nevo, E., Presence and ecological distribution of Mus spretoides and Mus musculus domesticus in Israel Circum-Mediterranenan in the genus Mus. Zeitschrift für Säugetierkunde, 55 (1990), 1-10.
  • Marin-Jimenez, D., Dessauer, H.C., Protein phenotype variation in laboratory populations of Rattus norvegicus. Comparative Biochemistry and Physiology Part B: Comparative Biochemistry, 46 (1973), 487-492. https://doi.org/10.1016/0305-0491(73)90088-6
Year 2024, , 55 - 66, 14.06.2024
https://doi.org/10.53447/communc.1359092

Abstract

References

  • Khlyap, L.A., Warshavsky, A.A., Synanthropic and agrophilic rodents as invasive alien mammals. Russian Journal of Biological Invasion, 4 (4) (2010), 301-312. https://doi.org/10.1134/S2075111710040089
  • Kosoy, M., Khlyap, L., Cosson, J.F., Morand, S., Aboriginal and invasive rats of genus Rattus as hosts of infectious agents. Vector-Borne and Zoonotic Diseases, 5 (1) (2015), 3-12. https://doi.org/10.1089/vbz.2014.1629
  • Vohrálík, V., Sofianidov, T.S., Frynta, D., Reproduction in Mus macedonicus (Mammalia: Rodentia) in the Balkans. Bonner Zoologische Beitrage, 47 (3-4) (1998), 283-292.
  • Kryśtufek, B., Machalon, M., Morphological differentiation in Mus spicilegus and the taxonomic status of mound-building from the Adriatic coast of Yugoslavia. Journal of Zoology, 245(2) (1998), 185-196. https://doi.org/10.1111/j.1469-7998.1998.tb00086.x
  • Özkan, B., Invasive coypus, Myocastor coypus (Molina; 1782) in European part of Turkey. Israel Journal of Zoology, 45 (1999), 289- 291.
  • Özkan, B., Krystufek, B., Wood mice, Apodemus of two Turkish islands: Gökçeada and Bozcaada. Folia Zoologica, 48 (1) (1999), 17-24.
  • Kryštufek, B., Vohralík, V., Mammals of Turkey and Cyprus. Introduction, Checklist, Insectivora, Knjižnica Annales Majora, Koper, 2001.
  • Gözcelioğlu, B., Çolak, R., Çolak, E., Yiğit, N., A Study on Mus domesticus Rutty, 1772 and Mus macedonicus Petrov and Ruzíc, 1983 (Mammalia: Rodentia) Distributed along the Line of Ankara, Bolu and Zonguldak. Turkish Journal of Zoology, 29 (2) (2005), 133-140.
  • Neumann, K., Michaux, J., Lebedev, V., Yigit, N., Colak, E., Ivanova, N., Poltoraus, A., Surov, A., Markov, G., Maak, S., Neumann, S., Gattermann, R., Molecular phylogeny of the Cricetinae subfamily based on the mitochondrial cytochrome b and 12S rRNA genes and the nuclear vWF gene. Molecular Phylogenetics and Evolution, 39 (1) (2006), 135-148. https://doi.org/10.1016/j.ympev.2006.01.010
  • Thaler, L., Bonhomme, F., Janice Britton-Davidian, Hamar, M., The House mouse complex of species: Sympatric occurrence of biochemical groups Mus 2 and Mus 4 in Rumania. Zeitschrift für Säugetierkunde, 46 (1981), 169-173.
  • Bonhomme, F., Catalan, J., Gerasimov, S., Orsini, Ph., Thaler, L., Le complexe d’espèces du genre Mus en Europe Centrale et Orientale I. Génétique. Zeitschrift für Säugetierkunde, 48 (1983), 78-85.
  • Bonhomme, F., Catalan, J., Davidian, J. B., Chapman, M.V., Moriwaki, K., Nevo, E., Thaler, L., Biochemical diversity and evolution in the Genus Mus. Biochemical Genetics, 22 (3/4) (1984), 275-303. https://doi.org/10.1007/BF00484229
  • Awasthi, M., Bhat, K.V., Anand, R.K., Allozymic variation in four Indian species of Genus Mus: a comparative analysis. Journal of Genetics, 78 (1999), 73-80. https://doi.org/10.1007/BF02924558
  • Mezhzherin, S.V., Kotenkova, E.V., Mikhailenko, A.G., The house mice, Mus musculus s. I., hybrid zone of Transcaucasus. Zeitschrift für Säugetierkunde, 63 (1998), 54-168.
  • Misonne, X., Mammiferes de la Turquie sub-orientale et du nord de la Syrie. Mammalia, 21 (1957), 53-67. https://doi.org/10.1515/mamm.1957.21.1.53
  • Bodenheimer, F.S., The present taxonomic status of the terrestrial mammals of Palestine. Bulletin of the Research Council of Israel B, 7 (1958), 165-190.
  • Hatt, R.T., The Mammals of Iraq. Miscellaneous Publication of the Museum of Zoology, University of Michigan, USA, 1959.
  • Ondrias, J.C., The taxanomy and geographical distribution of the rodents of Greece. Saugetierkundliche Mitteilungen, 14 (1966), 1- 136.
  • Lay, D.M., A study of the mammals of Iran, resulting from the street expedition of 1962-1963. Fieldiana Zoology, 54 (1967), 1-282.
  • Yiğit, N., Çolak, E., Sözen, M., Özkurt, Ş., The taxonomy and karyology of Rattus norvegicus (Berkenhout, 1769) and Rattus rattus (Linnaeus, 1758) (Rodentia:Muridae) in Turkey. Turkish Journal of Zoology, 22 (1998), 203-212.
  • Yiğit, N., Verimli, R., Çolak, E., Sözen, M., Özkurt, Ş., Blood-serum proteins of Rattus rattus and Rattus
  • Yiğit, N., Çolak, E., Kandemir, İ., Kankılıç, T., Çolak, R., Allozyme variation in Rattus rattus (Rodentia: Muridae) in Turkey, with particular emphasis on the taxonomy. Zoology in the Middle East, 45 (1) (2008), 19-28. https://doi.org/10.1080/09397140.2008.10638302
  • Yiğit, N., Çolak, E., Özkurt, Ş., Özlük, A., Çolak, R., Gül, N., Saygılı, F., Yüce. D., Allozyme variation in wild rats Rattus norvegicus (Berkenhout, 1769) (Mammalia: Rodentia) from Turkey. Acta Zoologica Bulgarica, 62 (1) (2010), 79-88.
  • Baydemir, N.A., Chromosomal polymorphism of Rattus rattus (Linnaeus, 1758) (rodentia: muridae) in Central Anatolia, Folia biologica (Kraków), 59 (1-2) (2011), 31-34. https://doi.org/10.3409/fb59_1-2.31-34
  • Kankılıç, T., Yiğit, N., Kankılıç, T., Chromosomal polymorphism in Thracian populations of Rattus rattus (Linnaeus, 1758) (Rodentia: Muridae). Turkish Journal of Zoology, 30 (3) (2006), 319-327.
  • Çolak R., Yiğit N., Çolak E., Sözen M., Özkurt Ş., Nonspecific esterase patterns of Rattus norvegicus (Berkenhout, 1769) in Western Turkey, Turkish Journal of Biology, 24 (4) (2000), 825-832.
  • Augustinsson, K. B., Henricson, B., A genetically controlled esterase in rat plasma. Biochimica et Biophysica Acta (BBA)-General Subjects, 124 (1966), 323-331. https://doi.org/10.1016/0304-4165(66)90195-4
  • Carter, N., Parr, C., Phosphogluconate dehydrogenase polymorphism in British wild rats. Nature, 224 (5225) (1969). https://doi.org/10.1038/2241214a0
  • Gasser, L.D., Silvers, W.K., Reynolds H.M., Black, G., Palm, J., Serum esterase genetics in rats: Two new alleles at Es-2, a new esterase regulated by hormonal factors, and linkage of these loci to the Ag-C blood group locus. Biochemical Genetics, 10 (3) (1973), 207-217. https://doi.org/10.1007/BF00485699
  • Marin-Jimenez, D., Enzyme inheritance in the laboratory rat. The journal of Heredity, 65 (1974), 235-237. https://doi.org/10.1093/oxfordjournals.jhered.a108512
  • Matsumoto, K., Syuto, B., Miyake, Y., Matsuhashi, A., Aizawa, M., Serum esterase genetics: identification and hormone induction of the Es-1b esterase in inbred rats. Biochemical Genetics, 17 (11-12) (1979), 1121-1130. https://doi.org/10.1007/BF00504349
  • Kendall, B., Glucose phosphate dehydrogenase polymorphism and the genetics of linkage group II in the Norway rat (Rattus norvegicus). Laboratory animals, 19 (1985), 169-172. https://doi.org/10.1258/002367785780893502
  • Samollow, P.B., Vandeberg, J.L., Ford, A.L., Kunz, H.W., Gill, T.J., Genetic analysis of liver neuraminidase isozymes in Rattus norvegicus: independent control of Neu-1 and Neu-2 phenotypes. Genetics, 114 (1986), 247-258. https://doi.org/10.1093/genetics/114.1.247
  • Baverstock, P.R., Adams, M., Maxon, L.R., Yosida, T.H., Genetic differentiation among karyotypic forms of black rat, Rattus rattus. Genetics, 105 (1983), 969-983. https://doi.org/10.1093/genetics/105.4.969
  • Baverstock, P.R., Adams, M., Watts, S.H.C., Biochemical differentiation among karyotypic forms of Australian Rattus. Genetica, 71 (1986), 11-22. https://doi.org/10.1007/BF00123228
  • Cramer, D.V., Chakravarti, A., Arenas, O., Humprieres, J., Mowery, P.A., Genetic diversity within and between natural populations of Rattus norvegicus. Journal of heredity, 79 (1988), 319-324. https://doi.org/10.1093/oxfordjournals.jhered.a110522
  • Skidmore, A.F., Beebee T.J.C., Changes in testicular lactate dehydrogenase of the rat (Rattus norvegicus) during growth and development. Comparative Biochemistry and physiology. B, Comparative Biochemistry, 98 (2/3) (1991), 279-282. https://doi.org/10.1016/0305-0491(91)90179-h
  • Yamada, T., Moralejo, D., Tsuchiya, K., Agui, T., Matsumoto, K., Biochemical polymorphisms in wild rats (Rattus norvegicus) captured in Oita city, Japan. Journal of Veterinary Medical Science, 55 (4) (1993), 673-675. https://doi.org/10.1292/jvms.55.673
  • Günther E., Walter L., The major histocompatibility complex of the rat (Rattus norvegicus). Immunogenetics, 53 (2001), 520-542. https://doi.org/10.1007/s002510100361
  • Rothe, G.M., Electrophoresis of Enzymes, Laboratory Methods, Springer Verlag, Berlin, 1994.
  • Shaw, C.R., Prasad, R., Starch gel electrophoresis of enzymes—A compilation of recipes. Biochemical Genetics, 4 (1970), 297-320. https://doi.org/10.1007/BF00485780
  • Harris, H., Hopkinson, D.A., Handbook of Enzyme Electrophoresis in Human Genetics, North-Holland Publishing Company, Amsterdam, 1976.
  • Russell, P.J., Genetics, The Benjamin/Cummings Publishing Company Inc., Michigan University, 1998.
  • Auffray, J.C., Tchernov, E., Bonhomme, F., Heth, G., Simson, S., Nevo, E., Presence and ecological distribution of Mus spretoides and Mus musculus domesticus in Israel Circum-Mediterranenan in the genus Mus. Zeitschrift für Säugetierkunde, 55 (1990), 1-10.
  • Marin-Jimenez, D., Dessauer, H.C., Protein phenotype variation in laboratory populations of Rattus norvegicus. Comparative Biochemistry and Physiology Part B: Comparative Biochemistry, 46 (1973), 487-492. https://doi.org/10.1016/0305-0491(73)90088-6
There are 45 citations in total.

Details

Primary Language English
Subjects Vertebrate Biology
Journal Section Research Articles
Authors

Nuri Yiğit 0000-0001-8426-2144

Ömer Faruk Aydıncılar 0009-0003-9539-016X

Ercüment Çolak 0000-0001-5826-1615

Publication Date June 14, 2024
Acceptance Date November 3, 2023
Published in Issue Year 2024

Cite

Communications Faculty of Sciences University of Ankara Series C-Biology.

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