Year 2025,
Volume: 34 Issue: 1, 1 - 35, 20.06.2025
Ortaç Çetintaş
,
Mustafa Sözen
,
Sercan Irmak
,
Kürşat Kenan Kalkan
,
Faruk Çolak
,
Ferhat Matur
Project Number
TÜBİTAK project number 113R029.
References
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Filippucci, M.G., Krystufek, B., Simson Shimon, Kurtonur, C., Özkan, B., Allozymic and biometric variation in Dryomys nitedula (Pallas, 1778). Hystrix, 6 (1–2) (1995), 127–140.
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Grigoryeva, O., Krivonogov, D., Balakirev, A., Stakheev, V., Andreychev, A., Orlov, V., Phylogeography of the forest dormouse Dryomys nitedula (Gliridae, Rodentia) in Russian Plain and the Caucasus. Folia Zoologica, 64 (4) (2015), 361–364. https://doi.org/10.25225/fozo.v64.i4.a12.2015
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Bisconti, R., Aloise, G., Siclari, A., Fava, V., Provenzano, M., Arduino, P., Chiocchio, A., Nascetti, G., Canestrelli, D., Forest dormouse (Dryomys nitedula) populations in southern Italy belong to a deeply divergent evolutionary lineage: Implications for taxonomy and conservation. Hystrix, 29 (1) (2018).
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Mohammadi, Z., Kami, H.G., Ghorbani, F., Khajeh, A., Olsson, U., Cryptic lineage diversity within Forest Dormice (Mammalia: Dryomys nitedula) revealed by deep genetic divergence among different subspecies on the Iranian Plateau and in adjacent areas. Mammalian Biology, 101 (2021), 21-34. https://doi.org/10.1007/s42991-020-00055-5
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Krystufek, B., Vohralík, V., Mammals of Turkey and Cyprus: Rodentia I: Sciuridae, Dipodidae, Gliridae, Arvicolinae. Koper: Zgodovinsko društvo za južno Primorsko, 2005.
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Yiğit, N., Çolak, E., Çolak, R., Özkan, B., Özkurt, Ş., On the Turkish populations of Dryomys nitedula (Pallas, 1779) and Dryomys laniger Felten and Storch, 1968 (Mammalia: Rodentia). Acta Zoologica Academiae Scientiarum Hungaricae, 49 (SUPPL. 1) (2003), 147–158.
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Kankılıç, T., Şeker, P.S., Erdik, A.C., Kankılıç, T., Selvi, E., Yiğit, N., Çolak, E., Determination of genetic variations in the genus Dryomys Thomas, 1906 (Rodentia: Gliridae) distributed in Turkey using NADH dehydrogenase 1 (ND1) gene. Mitochondrial DNA Part A, 29 (6) (2017), 933–942. https://doi.org/10.1080/24701394.2017.1389915
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Kankılıç, T., Şeker, P.S., Aydın, B., Altunbaş, D., Selvi, E., Yiğit, N., Çolak, E., Nuclear and organelle genes based phylogeny of Dryomys (Gliridae, Rodentia, Mammalia) from Turkey. Acta Zoologica Academiae Scientiarum Hungaricae, 65 (4) (2019), 399–413. https://doi.org/10.17109/AZH.65.4.399.2019
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Huang, S., Meijers, M.J.M., Eyres, A., Mulch, A., Fritz, S.A., Unravelling the history of biodiversity in mountain ranges through integrating geology and biogeography. Journal of Biogeography, 46 (8) (2019), 1777–1791. https://doi.org/10.1111/jbi.13622
-
Kafimola, S., Azimi, M., Saberi-Pirooz, R., Ilgaz, C., Mohammadi Kashani, G., Kapli, P., Ahmadzadeh, F., Diversification in the mountains: Evolutionary history and molecular phylogeny of Anatolian rock lizards. Molecular Phylogenetics and Evolution, (2023), 107675. https://doi.org/10.1016/j.ympev.2022.107675
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-
Kıvanç, E., Sözen, M., Çolak, E., Yiğit, N., Karyological and phallic characteristics of Dryomys laniger (Rodentia: Gliridae) Felten and Storch, 1968 in Turkey. Israel Journal of Zoology, 43 (4) (1997), 401–403.
-
Montgelard, C., Bentz, S., Tirard, C., Verneau, O., Catzeflis, F.M., Molecular systematics of sciurognathi (rodentia): the mitochondrial cytochrome b and 12S rRNA genes support the Anomaluroidea (Pedetidae and Anomaluridae). Molecular Phylogenetics and Evolution, 22 (2) (2002), 220–233.
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Stanhope, M.J., Czelusniak, J., Si, J.S., Nickerson, J., Goodman, M., A molecular perspective on mammalian evolution from the gene encoding interphotoreceptor retinoid binding protein, with convincing evidence for bat monophyly. Molecular Phylogenetics and Evolution, 1 (2) (1992), 148–160.
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Phylogeography of an Anatolian endemic and Alpine specialist woolly dormouse Dryomys laniger with a description of a new species
Year 2025,
Volume: 34 Issue: 1, 1 - 35, 20.06.2025
Ortaç Çetintaş
,
Mustafa Sözen
,
Sercan Irmak
,
Kürşat Kenan Kalkan
,
Faruk Çolak
,
Ferhat Matur
Abstract
The genus Dryomys, represented by four species, spreads a variety of habitats, including forests and mountains. The Wooly Dormouse (Dryomys laniger) is a rock-dwelling alpine species endemic to South and Central Anatolian mountains. No targeted study has been conducted to explore the full distribution area of this species nor to reveal the phylogenetic structure within the species. We used CYTB and IRBP as a molecular marker to see intraspecific diversity of the species. Besides this, morphological characters are used to reveal differences between the populations. Phylogenetic trees showed that Dryomys laniger has two different mtDNA clades, each with a distinct distribution range. The representatives of the most distinct clade also have a number of shared and distinct morphological features, and we hereby describe it as a new endemic species Dryomys anatolicus sp. nov. The other clade comprises two different clades. Despite considerable molecular differences between the two clades, we could not find any difference in morphology. Two endemic species have a complex history in Anatolia starting in the late Oligocene epoch. In that era, the ancestors of Dryomys laniger and Dryomys anatolicus separated from Dryomys nitedula and started to adapt to high altitudes. Then complete divergence between the two species occurred at the beginning of the Pliocene. In this study, we suggest that geologic events and climate have a big role in speciation events between Dryomys laniger and Dryomys anatolicus.
Supporting Institution
TÜBİTAK
Project Number
TÜBİTAK project number 113R029.
References
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Felten, H., Storch, G., Eine neue Schlafter-Art, Dryomys laniger n. sp. aus Kleinasien (Rodentia: Gliridae). Senckenbergiana Biologica, 49 (6) (1968), 429–435.
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Liao, L., An, R., Shi, S., Xu, Y., Luo, Y., Liao, W., One new species of the genus Dryomys (Rodentia, Glirgae) from Xinjiang China, Dryomys Yarkandensis sp . nov, BioRxiv, (2020). https://doi.org/10.1101/2020.02.11.943381
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-
Filippucci, M.G., Krystufek, B., Simson Shimon, Kurtonur, C., Özkan, B., Allozymic and biometric variation in Dryomys nitedula (Pallas, 1778). Hystrix, 6 (1–2) (1995), 127–140.
-
Grigoryeva, O., Krivonogov, D., Balakirev, A., Stakheev, V., Andreychev, A., Orlov, V., Phylogeography of the forest dormouse Dryomys nitedula (Gliridae, Rodentia) in Russian Plain and the Caucasus. Folia Zoologica, 64 (4) (2015), 361–364. https://doi.org/10.25225/fozo.v64.i4.a12.2015
-
Bisconti, R., Aloise, G., Siclari, A., Fava, V., Provenzano, M., Arduino, P., Chiocchio, A., Nascetti, G., Canestrelli, D., Forest dormouse (Dryomys nitedula) populations in southern Italy belong to a deeply divergent evolutionary lineage: Implications for taxonomy and conservation. Hystrix, 29 (1) (2018).
-
Mohammadi, Z., Kami, H.G., Ghorbani, F., Khajeh, A., Olsson, U., Cryptic lineage diversity within Forest Dormice (Mammalia: Dryomys nitedula) revealed by deep genetic divergence among different subspecies on the Iranian Plateau and in adjacent areas. Mammalian Biology, 101 (2021), 21-34. https://doi.org/10.1007/s42991-020-00055-5
-
Mursaloğlu, B., Türkiye’nin yabani memelileri, in: TÜBİTAK, Ankara, (1973), 1–10.
-
Obuch, J., Dormice in the diet of owls in the Middle East. Trakya University Journal of Scientific Research Series B, 2 (2) (2001), 145–150.
-
Kart Gür, M., Bulut, Ş., Gür, H., Refinetti, R., Body temperature patterns and use of torpor in an alpine glirid species, woolly dormouse. Acta Theriologica, 59 (2) (2014), 299–309. https://doi.org/10.1007/s13364-013-0154-9
-
Krystufek, B., Vohralík, V., Mammals of Turkey and Cyprus: Rodentia I: Sciuridae, Dipodidae, Gliridae, Arvicolinae. Koper: Zgodovinsko društvo za južno Primorsko, 2005.
-
Yiğit, N., Çolak, E., Çolak, R., Özkan, B., Özkurt, Ş., On the Turkish populations of Dryomys nitedula (Pallas, 1779) and Dryomys laniger Felten and Storch, 1968 (Mammalia: Rodentia). Acta Zoologica Academiae Scientiarum Hungaricae, 49 (SUPPL. 1) (2003), 147–158.
-
Kankılıç, T., Şeker, P.S., Erdik, A.C., Kankılıç, T., Selvi, E., Yiğit, N., Çolak, E., Determination of genetic variations in the genus Dryomys Thomas, 1906 (Rodentia: Gliridae) distributed in Turkey using NADH dehydrogenase 1 (ND1) gene. Mitochondrial DNA Part A, 29 (6) (2017), 933–942. https://doi.org/10.1080/24701394.2017.1389915
-
Kankılıç, T., Şeker, P.S., Aydın, B., Altunbaş, D., Selvi, E., Yiğit, N., Çolak, E., Nuclear and organelle genes based phylogeny of Dryomys (Gliridae, Rodentia, Mammalia) from Turkey. Acta Zoologica Academiae Scientiarum Hungaricae, 65 (4) (2019), 399–413. https://doi.org/10.17109/AZH.65.4.399.2019
-
Huang, S., Meijers, M.J.M., Eyres, A., Mulch, A., Fritz, S.A., Unravelling the history of biodiversity in mountain ranges through integrating geology and biogeography. Journal of Biogeography, 46 (8) (2019), 1777–1791. https://doi.org/10.1111/jbi.13622
-
Kafimola, S., Azimi, M., Saberi-Pirooz, R., Ilgaz, C., Mohammadi Kashani, G., Kapli, P., Ahmadzadeh, F., Diversification in the mountains: Evolutionary history and molecular phylogeny of Anatolian rock lizards. Molecular Phylogenetics and Evolution, (2023), 107675. https://doi.org/10.1016/j.ympev.2022.107675
-
Gündüz, I., Jaarola, M., Tez, C., Yeniyurt, C., Polly, P.D., Searle, J.B., Multigenic and morphometric differentiation of ground squirrels (Spermophilus, Scuiridae, Rodentia) in Turkey, with a description of a new species. Molecular Phylogenetics and Evolution, 43 (3) (2007), 916–935. https://doi.org/10.1016/j.ympev.2007.02.021
-
Kaya, S., Boztepe, Z., Çiplak, B., Phylogeography of Troglophilus (Orthoptera: Troglophilinae) based on Anatolian members of the genus: radiation of an old lineage following the Messinian, Biological Journal of the Linnean Society. Linnean Society of London, 108 (2) (2013), 335–348. https://doi.org/10.1111/j.1095-8312.2012.02025.x
-
Bilgin, R., Back to the suture: the distribution of intraspecific genetic diversity in and around anatolia., International Journal of Molecular Sciences, 12 (6) (2011), 4080–4103. https://doi.org/10.3390/ijms12064080
-
Kıvanç, E., Sözen, M., Çolak, E., Yiğit, N., Karyological and phallic characteristics of Dryomys laniger (Rodentia: Gliridae) Felten and Storch, 1968 in Turkey. Israel Journal of Zoology, 43 (4) (1997), 401–403.
-
Montgelard, C., Bentz, S., Tirard, C., Verneau, O., Catzeflis, F.M., Molecular systematics of sciurognathi (rodentia): the mitochondrial cytochrome b and 12S rRNA genes support the Anomaluroidea (Pedetidae and Anomaluridae). Molecular Phylogenetics and Evolution, 22 (2) (2002), 220–233.
https://doi.org/10.1006/mpev.2001.1056
-
Stanhope, M.J., Czelusniak, J., Si, J.S., Nickerson, J., Goodman, M., A molecular perspective on mammalian evolution from the gene encoding interphotoreceptor retinoid binding protein, with convincing evidence for bat monophyly. Molecular Phylogenetics and Evolution, 1 (2) (1992), 148–160.
https://doi.org/10.1016/1055-7903(92)90026-d
-
Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C., Thierer, T., Ashton, B., Meintjes, P., Drummond, A., Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics, 28 (12) (2012), 1647–1649. https://doi.org/10.1093/bioinformatics/bts199
-
Nylander, J.A.A., MrModeltest v2, Program Distributed by the Author, (2004).
-
Silvestro, D., Michalak, I., raxmlGUI: a graphical front-end for RAxML. Organisms Diversity & Evolution, 12 (4) (2012), 335–337. https://doi.org/10.1007/s13127-011-0056-0
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Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A., Huelsenbeck, J.P., MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space, Systematic Biology, 61 (3) (2012), 539–542. https://doi.org/10.1093/sysbio/sys029
-
Rozas, J., Ferrer-Mata, A., Sánchez-DelBarrio, J.C., Guirao-Rico, S., Librado, P., Ramos-Onsins, S.E., Sánchez-Gracia, A., Dnasp 6: DNA sequence polymorphism analysis of large data sets, Molecular Biology and Evolution, 34 (12) (2017), 3299–3302. https://doi.org/10.1093/molbev/msx248
-
Kumar, S., Stecher, G., Li, M., Knyaz, C., Tamura, K., MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35 (6) (2018), 1547–1549. https://doi.org/10.1093/molbev/msy096
-
Clement, M., Posada, D., Crandall, K.A., TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9 (10) (2000), 1657–1659. https://doi.org/10.1046/j.1365-294x.2000.01020.x
-
Leigh, J.W., Bryant, D., POPART: full-feature software for haplotype network construction. Methods in Ecology and Evolution, 6 (9) (2015), 1110–1116. https://doi.org/10.1111/2041-210X.12410
-
Excoffier, L., Lischer, H.E.L., Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10 (3) (2010), 564–567. https://doi.org/10.1111/j.1755-0998.2010.02847.x
-
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