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NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE

Year 2007, Volume: 4 Issue: 3, 100 - 106, 01.09.2007

Nizami Duran Fatma Öztürk Leyla Açık Özkan Aslantaş Gönül Aslan

Abstract

Keywords

-

References

  • 1. Odds FC. Pathogenesis of Candida infections. Review. J Am Acad Dermatol 1994;31:2-5
  • 2. Vargas KG, Joly S. Carriage frequency, intensity of carriage, and strains of oral yeast species vary in the progression to oral candidiasis in human immunodeficiency virus-positive individuals. Clin Microbiol 2002;40: 341-50
  • 3. Diaz-Guerra TM, Martinez-Suarez JV, Laguna F, Rodriguez-Tudela JL. Comparison of four molecular typing methods for evaluating genetic diversity among Candida albicans isolates from human immunodeficiency virus-positive patients with oral candidiasis. J Clin Microbiol 1997;35:856-61
  • 4. Lockhart SR, Reed BD, Pierson CL, Soll DR. Most frequent scenario for recurrent Candida vaginitis is strain maintenance with “substrain shuffling“: demonstration by sequential DNA fingerprinting with probes Ca3, C1, and CARE2. J Clin Microbiol 1996;34:767-77
  • 5. Hellstein J, Vawter-Hugart H, Fotos P, Schmid J, Soll DR. Genetic similarity and phenotypic diversity of commensal and pathogenic strains of Candida albicans isolated from the oral cavity. J Clin Microbiol 1993;31:3190-7
  • 6. Pfaller MA, Diekema DJ. Twelve years of fluconazole in clinical practice: global trends in species distribution and fluconazole susceptibility of bloodstream isolates of Candida. Clin Microbiol Infect 2004;10:11-23
  • 7. Warren NG, Shadomy HJ. Yeast of medical importance. In: Balows A, Hausler WJ, Hermann KL, Isenberg HD, Shadomy HJ, editors. Manual of Clinical Microbiology. American Society for Microbiology, Washington, DC; 1991; p. 617-29
  • 8. Fridkin SK, Welbel SF, Weinstein RA. Magnitude and prevention of nosocomial infections in the intensive care unit. Review. Infect Dis Clin North Am 1997; 11:479-96
  • 9. Fridkin SK, Jarvis WR. Epidemiology of nosocomial fungal infections. Clin Microbiol Rev 1996;9:499-511
  • 10. Beck-Sague C, Jarvis WR. Secular trends in the epidemiology of nosocomial fungal infections in the United States, 1980- 1990. National Nosocomial Infections Surveillance. System J Infect Dis 1993; 167:1247-51
  • 11. Phongpaichit S, Mackenzie W, Fraser C. Strain differentiation of Candida albicans by morphotyping. Epidemiol Infect 1987;99:421-8
  • 12. McCreight MC, Warnock DW. Enhanced differentiation of isolates of Candida albicans using a modified resistogram method. Mykosen 1982;25:589-98
  • 13. Schwartz DC. Cantor CR. Separation of yeast chromosome sized DNAs by pulsed field gradient gel electrophoresis. Cell 1984;37:66-75
  • 14. Vazquez JA, Sanchez V, Dimuchowski C, Dembry L. Nosocomial acquisition of Candida albicans : An epidemiologic study. J Infect Dis 1993;168:195-201
  • 15. Boriollo MFG, Rosa EAR, BernardoWLC, Gonçalves RB, Höfling JF. Electrophoretic protein patterns and numerical analysis of Candida albicans from the oral cavities of healthy children. Rev Inst Med Trop 2003;45:249-57
  • 16. Haynes K, Westerneng T, Fell J, Moens W. Rapid detection and identification of pathogenic fungi by polymerase chain reaction amplification of large subunit ribosomal DNA. J Med Vet Mycol 1995; 33:319-25
  • 17. Höfling JF, Rosa EAR, Pereira CV, Boriollo MFG, Rodrigues JAO. Differentiation and numerical analysis of oral yeasts based on SDS-PAGE profiles. Influence of the culture media on the whole-cell protein extracts. Brazil J Biol 1999;61:507-16
  • 18. Al-Rawi N, Kavanagh K. A rapid method for the extraction of whole cell proteins from candida species. J Microbiol Methods 1998;34:107-12
  • 19. Merz WG, Roberts GD. Algorithms for detection and identification of fungi. In: Murray PR, Baron EJ, Pfaller MA, Tenover FC, Yolken RH, editors. Manual of Clinical Microbiology, Washington, DC: ASM Press, 1999: 1167-83
  • 20. Maiden MFJ, Tanner A. Identification of oral yeasts by polyacrylamide gel electrophoresis. Oral Microbiol Immunol 1991;6:187-90
  • 21. Vancanneyt M, Pot B, Hennebert G, Kersters K. Differentiation of yeast species based on electrophoretic wholecell protein patterns. Syst Appl Microbiol 1991;14:23-32
  • 22. Koneman EW, Allen SD, Janda WM, Schreckenberger PC, Winn WC. Identification of fungal culture isolates. In: Color Atlas and Textbook of Diagnostic Microbiology, 5th edn. Philadelphia: Lippincott Company, 1997: p. 993-999.
  • 23. Kishore L, Natarajan K, Babu LR. Total soluble protein and membrane lipopolysaccharide profiles in differentiating Rhizobium isolates. Microbios 1996;86:143-56
  • 24. Laemli UK. Cleavege of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970;227: 680-4
  • 25. Bushuk W, Hay RL, Larsen NG, Sara RG, Simmons LD, Sutton KH. Effect of mechanical dough development on the extractability of wheat storage proteins from bread dough. Cereal Chemistry 1997:74:389-95
  • 26. Demiralp H, Çelik S, Köksel H. Effects of oxidizing agents and defatting on the electrophoretic patterns of flour proteins during dough mixing. Eur Food Res Technol 2000;211;322-5
  • 27. National Committee for Clinical Laboratory Standards. Reference method for broth dilution antifungal susceptibility testing of yeasts; Approved Standard M27-A. Wayne, Philadelphia: National Committee for Clinical Laboratory Standards, 2002
  • 28. Nei M. Genetic distance between population. Am Nat 1972;949:283-92
  • 29. de Oliveira RD, Maffei CM, Martinez R. Nosocomial urinary tract infections by Candida species Rev Assoc Med Bras 2001;47:231-5
  • 30. Kobayashi CC, de Fernandes OF, Miranda KC, de Sousa ED, Silva Mdo R. Candiduria in hospital patients: a study prospective. Mycopathologia 2004;158: 49-52
  • 31. Bart-Delabesse E, van Deventer H, Goessens W, et al. Contribution of molecular typing methods and antifungal susceptibility testing to the study of a candidemia cluster in a burn care unit. J Clin Microbiol 1995;33:3278-83
  • 32. Voss A, Pfaller MA, Hollis RJ, RhineChalberg J, Doebbeling BN. Investigation of Candida albicans transmission in a surgical intensive care unit cluster by using genomic DNA typing methods. J Clin Microbiol 1995;33:576-80
  • 33. Nguyen MH, Peacock JR Jr, Morris AJ et al. The changing face of candidemia: emergence of non-Candida albicans species and antifungal resistance. Am J Med 1996;100:617-23
  • 34. Georgopapadakou N, Walsh TJ. Antifungal agents: chemotherapeutic targets and immunologic strategies. Antimicrob Agents Chemother 1996;40: 279-91
  • 35. Troke PF. In vitro and experimental in vivo activities of fluconazole against some fungi causing cutaneous mycoses. In: Rippon JW, Fromtling RA. Editors. Cutaneous antifungal agents. New York, Marcel Dekker, 1993: p. 199-214
  • 36. Bossche HV. Mechanisms of antifungal resistance. Rev Iberoam Micol 1997;14: 44-9

NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE

Year 2007, Volume: 4 Issue: 3, 100 - 106, 01.09.2007

Nizami Duran Fatma Öztürk Leyla Açık Özkan Aslantaş Gönül Aslan

Abstract

-

Keywords

-

References

  • 1. Odds FC. Pathogenesis of Candida infections. Review. J Am Acad Dermatol 1994;31:2-5
  • 2. Vargas KG, Joly S. Carriage frequency, intensity of carriage, and strains of oral yeast species vary in the progression to oral candidiasis in human immunodeficiency virus-positive individuals. Clin Microbiol 2002;40: 341-50
  • 3. Diaz-Guerra TM, Martinez-Suarez JV, Laguna F, Rodriguez-Tudela JL. Comparison of four molecular typing methods for evaluating genetic diversity among Candida albicans isolates from human immunodeficiency virus-positive patients with oral candidiasis. J Clin Microbiol 1997;35:856-61
  • 4. Lockhart SR, Reed BD, Pierson CL, Soll DR. Most frequent scenario for recurrent Candida vaginitis is strain maintenance with “substrain shuffling“: demonstration by sequential DNA fingerprinting with probes Ca3, C1, and CARE2. J Clin Microbiol 1996;34:767-77
  • 5. Hellstein J, Vawter-Hugart H, Fotos P, Schmid J, Soll DR. Genetic similarity and phenotypic diversity of commensal and pathogenic strains of Candida albicans isolated from the oral cavity. J Clin Microbiol 1993;31:3190-7
  • 6. Pfaller MA, Diekema DJ. Twelve years of fluconazole in clinical practice: global trends in species distribution and fluconazole susceptibility of bloodstream isolates of Candida. Clin Microbiol Infect 2004;10:11-23
  • 7. Warren NG, Shadomy HJ. Yeast of medical importance. In: Balows A, Hausler WJ, Hermann KL, Isenberg HD, Shadomy HJ, editors. Manual of Clinical Microbiology. American Society for Microbiology, Washington, DC; 1991; p. 617-29
  • 8. Fridkin SK, Welbel SF, Weinstein RA. Magnitude and prevention of nosocomial infections in the intensive care unit. Review. Infect Dis Clin North Am 1997; 11:479-96
  • 9. Fridkin SK, Jarvis WR. Epidemiology of nosocomial fungal infections. Clin Microbiol Rev 1996;9:499-511
  • 10. Beck-Sague C, Jarvis WR. Secular trends in the epidemiology of nosocomial fungal infections in the United States, 1980- 1990. National Nosocomial Infections Surveillance. System J Infect Dis 1993; 167:1247-51
  • 11. Phongpaichit S, Mackenzie W, Fraser C. Strain differentiation of Candida albicans by morphotyping. Epidemiol Infect 1987;99:421-8
  • 12. McCreight MC, Warnock DW. Enhanced differentiation of isolates of Candida albicans using a modified resistogram method. Mykosen 1982;25:589-98
  • 13. Schwartz DC. Cantor CR. Separation of yeast chromosome sized DNAs by pulsed field gradient gel electrophoresis. Cell 1984;37:66-75
  • 14. Vazquez JA, Sanchez V, Dimuchowski C, Dembry L. Nosocomial acquisition of Candida albicans : An epidemiologic study. J Infect Dis 1993;168:195-201
  • 15. Boriollo MFG, Rosa EAR, BernardoWLC, Gonçalves RB, Höfling JF. Electrophoretic protein patterns and numerical analysis of Candida albicans from the oral cavities of healthy children. Rev Inst Med Trop 2003;45:249-57
  • 16. Haynes K, Westerneng T, Fell J, Moens W. Rapid detection and identification of pathogenic fungi by polymerase chain reaction amplification of large subunit ribosomal DNA. J Med Vet Mycol 1995; 33:319-25
  • 17. Höfling JF, Rosa EAR, Pereira CV, Boriollo MFG, Rodrigues JAO. Differentiation and numerical analysis of oral yeasts based on SDS-PAGE profiles. Influence of the culture media on the whole-cell protein extracts. Brazil J Biol 1999;61:507-16
  • 18. Al-Rawi N, Kavanagh K. A rapid method for the extraction of whole cell proteins from candida species. J Microbiol Methods 1998;34:107-12
  • 19. Merz WG, Roberts GD. Algorithms for detection and identification of fungi. In: Murray PR, Baron EJ, Pfaller MA, Tenover FC, Yolken RH, editors. Manual of Clinical Microbiology, Washington, DC: ASM Press, 1999: 1167-83
  • 20. Maiden MFJ, Tanner A. Identification of oral yeasts by polyacrylamide gel electrophoresis. Oral Microbiol Immunol 1991;6:187-90
  • 21. Vancanneyt M, Pot B, Hennebert G, Kersters K. Differentiation of yeast species based on electrophoretic wholecell protein patterns. Syst Appl Microbiol 1991;14:23-32
  • 22. Koneman EW, Allen SD, Janda WM, Schreckenberger PC, Winn WC. Identification of fungal culture isolates. In: Color Atlas and Textbook of Diagnostic Microbiology, 5th edn. Philadelphia: Lippincott Company, 1997: p. 993-999.
  • 23. Kishore L, Natarajan K, Babu LR. Total soluble protein and membrane lipopolysaccharide profiles in differentiating Rhizobium isolates. Microbios 1996;86:143-56
  • 24. Laemli UK. Cleavege of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970;227: 680-4
  • 25. Bushuk W, Hay RL, Larsen NG, Sara RG, Simmons LD, Sutton KH. Effect of mechanical dough development on the extractability of wheat storage proteins from bread dough. Cereal Chemistry 1997:74:389-95
  • 26. Demiralp H, Çelik S, Köksel H. Effects of oxidizing agents and defatting on the electrophoretic patterns of flour proteins during dough mixing. Eur Food Res Technol 2000;211;322-5
  • 27. National Committee for Clinical Laboratory Standards. Reference method for broth dilution antifungal susceptibility testing of yeasts; Approved Standard M27-A. Wayne, Philadelphia: National Committee for Clinical Laboratory Standards, 2002
  • 28. Nei M. Genetic distance between population. Am Nat 1972;949:283-92
  • 29. de Oliveira RD, Maffei CM, Martinez R. Nosocomial urinary tract infections by Candida species Rev Assoc Med Bras 2001;47:231-5
  • 30. Kobayashi CC, de Fernandes OF, Miranda KC, de Sousa ED, Silva Mdo R. Candiduria in hospital patients: a study prospective. Mycopathologia 2004;158: 49-52
  • 31. Bart-Delabesse E, van Deventer H, Goessens W, et al. Contribution of molecular typing methods and antifungal susceptibility testing to the study of a candidemia cluster in a burn care unit. J Clin Microbiol 1995;33:3278-83
  • 32. Voss A, Pfaller MA, Hollis RJ, RhineChalberg J, Doebbeling BN. Investigation of Candida albicans transmission in a surgical intensive care unit cluster by using genomic DNA typing methods. J Clin Microbiol 1995;33:576-80
  • 33. Nguyen MH, Peacock JR Jr, Morris AJ et al. The changing face of candidemia: emergence of non-Candida albicans species and antifungal resistance. Am J Med 1996;100:617-23
  • 34. Georgopapadakou N, Walsh TJ. Antifungal agents: chemotherapeutic targets and immunologic strategies. Antimicrob Agents Chemother 1996;40: 279-91
  • 35. Troke PF. In vitro and experimental in vivo activities of fluconazole against some fungi causing cutaneous mycoses. In: Rippon JW, Fromtling RA. Editors. Cutaneous antifungal agents. New York, Marcel Dekker, 1993: p. 199-214
  • 36. Bossche HV. Mechanisms of antifungal resistance. Rev Iberoam Micol 1997;14: 44-9
There are 36 citations in total.

Details

Primary Language English
Journal Section Original Articles
Authors

Nizami Duran This is me

Fatma Öztürk This is me

Leyla Açık This is me

Özkan Aslantaş This is me

Gönül Aslan This is me

Publication Date September 1, 2007
Published in Issue Year 2007 Volume: 4 Issue: 3

Cite

APA Duran, N., Öztürk, F., Açık, L., Aslantaş, Ö., et al. (2007). NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE. European Journal of General Medicine, 4(3), 100-106.
AMA Duran N, Öztürk F, Açık L, Aslantaş Ö, Aslan G. NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE. European Journal of General Medicine. September 2007;4(3):100-106.
Chicago Duran, Nizami, Fatma Öztürk, Leyla Açık, Özkan Aslantaş, and Gönül Aslan. “NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE”. European Journal of General Medicine 4, no. 3 (September 2007): 100-106.
EndNote Duran N, Öztürk F, Açık L, Aslantaş Ö, Aslan G (September 1, 2007) NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE. European Journal of General Medicine 4 3 100–106.
IEEE N. Duran, F. Öztürk, L. Açık, Ö. Aslantaş, and G. Aslan, “NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE”, European Journal of General Medicine, vol. 4, no. 3, pp. 100–106, 2007.
ISNAD Duran, Nizami et al. “NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE”. European Journal of General Medicine 4/3 (September 2007), 100-106.
JAMA Duran N, Öztürk F, Açık L, Aslantaş Ö, Aslan G. NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE. European Journal of General Medicine. 2007;4:100–106.
MLA Duran, Nizami et al. “NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE”. European Journal of General Medicine, vol. 4, no. 3, 2007, pp. 100-6.
Vancouver Duran N, Öztürk F, Açık L, Aslantaş Ö, Aslan G. NUMERICAL ANALYSIS OF CANDIDA SPECIES FROM URINER SYSTEM INFECTIONS BASED ON SDS-PAGE AND DETECTION OF ANTIFUNGAL RESISTANCE. European Journal of General Medicine. 2007;4(3):100-6.