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Chronic Kidney Disease Prediction with Reduced Individual Classifiers

Year 2018, Volume: 18 Issue: 2, 249 - 255, 03.08.2018

Abstract

DOI: 10.26650/electrica.2018.99255

Chronic kidney disease is a rising health
problem and involves conditions that decrease the efficiency of renal functions
and that damage the kidneys. Chronic kidney disease may be detected with
several classification techniques, and these have been classified using various
features and classifier combinations. In this study, we applied seven different
classifiers (Naïve Bayes, HoeffdingTree, RandomTree, REPTree, Random Subspaces,
Adaboost, and IBk) for the diagnosis of chronic kidney disease. The
classification performances are evaluated with five different performance
metrics, i.e., accuracy, kappa, mean absolute error (MAE), root mean square
error (RMSE), and F measures. Considering the classification performance
analyses of these methods, six reduced features provide a better and more rapid
classification performance. Seven individual classifiers are applied to the six
features and the best results are obtained using individual random tree and IBk
classifiers.

References

  • 1. A. S. Levey, J. Coresh, E. Balk, A. T. Kausz, A. Levin, M. W. Steffes, R. J. Hogg, R. D. Perrone, J. Lau, G. Eknoyan, “National Kidney Foundation Practice Guidelines for Chronic Kidney Disease: Evaluation, Classification, and Stratification”, Ann Intern Med, vol. 139, no. 2, pp. 137-147, 2003.
  • 2. A. S. Levey, J. P. Bosch, J. B. Lewis, T. Greene, N. Rogers, D. Roth, “A More Accurate Method To Estimate Glomerular Filtration Rate from Serum Creatinine: A New Prediction Equation”, Ann Intern Med, vol. 130, no. 6, 461-470, 1999.
  • 3. J. B. Arlet, J. A. Ribeil, G. Chatellier, D. Eladari, S. de Seigneux, J. C. Souberbielle, G. Friedlander, M. de Montalembert, J. Pouchot, D. Prie, M. Courbebaisse, “Determination of the best method to estimate glomerular filtration rate from serum creatinine in adult patients with sickle cell disease: a prospective observational cohort study”, BMC Nephrology, vol. 13, no. 1, 2012.
  • 4. K. Sumida, M. Z. Molnar, P. K. Potukuchi, F. Thomas, J. L. Lu, J. Jing, V. A. Ravel, M. Soohoo, C. M. Rhee, E. Streja, K. Kalantar Zadeh, C. P. Kovesdy, “Association of Slopes of Estimated Glomerular Filtration Rate With Post-End-Stage Renal Disease Mortality in Patients With Advanced Chronic Kidney Disease Transitioning to Dialysis”, Mayo Clin Proc, vol. 91, no. 2, pp. 196-207, 2016.
  • 5. A. S. Go, G. M. Chertow, D. Fan, C. E. McCulloch, C. Y. Hsu, “Chronic kidney disease and the risks of death, cardiovascular events, and hospitalization”, N Engl J Med, vol. 351, no. 13, pp. 1296-1305, 2004.
  • 6. Ş. Şengul, Y. Erdem, V. Batuman, Ş. Erturk, “Hypertension and Chnoniz Kidney Disease in Turkey”, Kidney Int Suppl (2011), vol. 3, no. 4, pp. 308-311, 2013.
  • 7. T. Liyanage, T. Ninomiya, V. Jha, B. Neal, H. M. Patrice, I. Okpechi, M. Zhao, J. Lv, A. X Garg, J. Knight, A. Rodgers, M. Gallagher, S. Kotwal, A. Cass, V. Perkovic, “Worldwide access to treatment for end-stage kidney disease: a systematic review”, Lancet, vol. 385, no. 9981, pp. 1975-1982, 2015.
  • 8. N. R. Hill, S. T. Fatoba, J. L. Oke, J. A. Hirst, C. A. O’Callaghan, D. S. Lasserson, F. D. Hobbs, “Global Prevalence of Chronic Kidney Disease-A Systematic Review and Meta-Analysis”, PloS One, vol. 11, no. 7, 2016
  • 9. L. Jena, N. K. Kamila, “Distributed Data Mining Classification Algorithms for Prediction of Chronic- Kidney-Disease”, International Journal of Emerging Research in Man & Tech, Vvol. 4, no. 11, pp. 110-118, 2015.
  • 10. Weka 3: Data Mining Software in Java. (n.d.). Retrieved February 24, 2018, from http://www.cs.waikato.ac.nz/ml/weka/.
  • 11. A. Chaudhary, P. Garg, “Detecting and Diagnosing a Disease by Patient Monitoring System”, International Journal of Mechanical Engineering and Information Technology, vol. 2, no. 6, pp. 493-499, 2014.
  • 12. P. Baby, T. P. Vital, “Statistical Analysis and Predicting Kidney Diseases using Machine Learning Algorithms”, International Journal of Engineering and Technical Research, vol. 7, no. 7, 2015.
  • 13. P. Sinha, P. Sinha, “Comparative Study of Chronic Kidney Disease Prediction using KNN and SVM”, International Journal of Engineering and Technical Research, vol. 4, no. 12, 2015.
  • 14. S. Vijayarani, S. Dhayanand, “Data Mining Classification Algorithms for Kidney Disease Prediction”, International Journal on Cybernetics & Informatics, vol. 4, no. 4, pp. 13-25, 2015.
  • 15. M. Lichman, UC Irvine Machine Learning Repository, University of California “http://archive.ics.uci.edu/ml”, Irvine, School of Information and Computer Sciences, 2013.
  • 16. Chronic Kidney Disease Overview. Retrieved February 24, 2018, from https://www.webmd.com/a-to-z-guides/tc/chronickidney-disease-topic-overview.
  • 17. S. Mitra, Introduction to machine learning and bioinformatics. Boca Raton: CRC Press, 2008.
  • 18. M. Doğruyol Başar, P. Sarı, N. Kılıç, A. Akan, “Detection of Chronic Kidney Disease by Using Adaboost Ensemble Learning Approach”, 24th Signal Processing and Communication Application Conference (SIU), 2016.
  • 19. M. Doğruyol Başar, A. Akan, “Detection of Chronic Kidney Disease by Using Ensemble Classifiers”, 10th International Conference on Electrical and Electronics Engineering (ELECO), pp. 544-547, 2017.

Chronic Kidney Disease Prediction with Reduced Individual Classifiers

Year 2018, Volume: 18 Issue: 2, 249 - 255, 03.08.2018

Abstract

DOI: 10.26650/electrica.2018.99255

Chronic kidney disease is a rising health problem and involves conditions that decrease the efficiency of renal functions and that damage the kidneys. Chronic kidney disease may be detected with several classification techniques, and these have been classified using various features and classifier combinations. In this study, we applied seven different classifiers (Naïve Bayes, HoeffdingTree, RandomTree, REPTree, Random Subspaces, Adaboost, and IBk) for the diagnosis of chronic kidney disease. The classification performances are evaluated with five different performance metrics, i.e., accuracy, kappa, mean absolute error (MAE), root mean square error (RMSE), and F measures. Considering the classification performance analyses of these methods, six reduced features provide a better and more rapid classification performance. Seven individual classifiers are applied to the six features and the best results are obtained using individual random tree and IBk classifiers.

References

  • 1. A. S. Levey, J. Coresh, E. Balk, A. T. Kausz, A. Levin, M. W. Steffes, R. J. Hogg, R. D. Perrone, J. Lau, G. Eknoyan, “National Kidney Foundation Practice Guidelines for Chronic Kidney Disease: Evaluation, Classification, and Stratification”, Ann Intern Med, vol. 139, no. 2, pp. 137-147, 2003.
  • 2. A. S. Levey, J. P. Bosch, J. B. Lewis, T. Greene, N. Rogers, D. Roth, “A More Accurate Method To Estimate Glomerular Filtration Rate from Serum Creatinine: A New Prediction Equation”, Ann Intern Med, vol. 130, no. 6, 461-470, 1999.
  • 3. J. B. Arlet, J. A. Ribeil, G. Chatellier, D. Eladari, S. de Seigneux, J. C. Souberbielle, G. Friedlander, M. de Montalembert, J. Pouchot, D. Prie, M. Courbebaisse, “Determination of the best method to estimate glomerular filtration rate from serum creatinine in adult patients with sickle cell disease: a prospective observational cohort study”, BMC Nephrology, vol. 13, no. 1, 2012.
  • 4. K. Sumida, M. Z. Molnar, P. K. Potukuchi, F. Thomas, J. L. Lu, J. Jing, V. A. Ravel, M. Soohoo, C. M. Rhee, E. Streja, K. Kalantar Zadeh, C. P. Kovesdy, “Association of Slopes of Estimated Glomerular Filtration Rate With Post-End-Stage Renal Disease Mortality in Patients With Advanced Chronic Kidney Disease Transitioning to Dialysis”, Mayo Clin Proc, vol. 91, no. 2, pp. 196-207, 2016.
  • 5. A. S. Go, G. M. Chertow, D. Fan, C. E. McCulloch, C. Y. Hsu, “Chronic kidney disease and the risks of death, cardiovascular events, and hospitalization”, N Engl J Med, vol. 351, no. 13, pp. 1296-1305, 2004.
  • 6. Ş. Şengul, Y. Erdem, V. Batuman, Ş. Erturk, “Hypertension and Chnoniz Kidney Disease in Turkey”, Kidney Int Suppl (2011), vol. 3, no. 4, pp. 308-311, 2013.
  • 7. T. Liyanage, T. Ninomiya, V. Jha, B. Neal, H. M. Patrice, I. Okpechi, M. Zhao, J. Lv, A. X Garg, J. Knight, A. Rodgers, M. Gallagher, S. Kotwal, A. Cass, V. Perkovic, “Worldwide access to treatment for end-stage kidney disease: a systematic review”, Lancet, vol. 385, no. 9981, pp. 1975-1982, 2015.
  • 8. N. R. Hill, S. T. Fatoba, J. L. Oke, J. A. Hirst, C. A. O’Callaghan, D. S. Lasserson, F. D. Hobbs, “Global Prevalence of Chronic Kidney Disease-A Systematic Review and Meta-Analysis”, PloS One, vol. 11, no. 7, 2016
  • 9. L. Jena, N. K. Kamila, “Distributed Data Mining Classification Algorithms for Prediction of Chronic- Kidney-Disease”, International Journal of Emerging Research in Man & Tech, Vvol. 4, no. 11, pp. 110-118, 2015.
  • 10. Weka 3: Data Mining Software in Java. (n.d.). Retrieved February 24, 2018, from http://www.cs.waikato.ac.nz/ml/weka/.
  • 11. A. Chaudhary, P. Garg, “Detecting and Diagnosing a Disease by Patient Monitoring System”, International Journal of Mechanical Engineering and Information Technology, vol. 2, no. 6, pp. 493-499, 2014.
  • 12. P. Baby, T. P. Vital, “Statistical Analysis and Predicting Kidney Diseases using Machine Learning Algorithms”, International Journal of Engineering and Technical Research, vol. 7, no. 7, 2015.
  • 13. P. Sinha, P. Sinha, “Comparative Study of Chronic Kidney Disease Prediction using KNN and SVM”, International Journal of Engineering and Technical Research, vol. 4, no. 12, 2015.
  • 14. S. Vijayarani, S. Dhayanand, “Data Mining Classification Algorithms for Kidney Disease Prediction”, International Journal on Cybernetics & Informatics, vol. 4, no. 4, pp. 13-25, 2015.
  • 15. M. Lichman, UC Irvine Machine Learning Repository, University of California “http://archive.ics.uci.edu/ml”, Irvine, School of Information and Computer Sciences, 2013.
  • 16. Chronic Kidney Disease Overview. Retrieved February 24, 2018, from https://www.webmd.com/a-to-z-guides/tc/chronickidney-disease-topic-overview.
  • 17. S. Mitra, Introduction to machine learning and bioinformatics. Boca Raton: CRC Press, 2008.
  • 18. M. Doğruyol Başar, P. Sarı, N. Kılıç, A. Akan, “Detection of Chronic Kidney Disease by Using Adaboost Ensemble Learning Approach”, 24th Signal Processing and Communication Application Conference (SIU), 2016.
  • 19. M. Doğruyol Başar, A. Akan, “Detection of Chronic Kidney Disease by Using Ensemble Classifiers”, 10th International Conference on Electrical and Electronics Engineering (ELECO), pp. 544-547, 2017.
There are 19 citations in total.

Details

Primary Language English
Subjects Engineering
Journal Section Articles
Authors

Merve Doğruyol Başar

Aydın Akan This is me

Publication Date August 3, 2018
Published in Issue Year 2018 Volume: 18 Issue: 2

Cite

APA Doğruyol Başar, M., & Akan, A. (2018). Chronic Kidney Disease Prediction with Reduced Individual Classifiers. Electrica, 18(2), 249-255.
AMA Doğruyol Başar M, Akan A. Chronic Kidney Disease Prediction with Reduced Individual Classifiers. Electrica. August 2018;18(2):249-255.
Chicago Doğruyol Başar, Merve, and Aydın Akan. “Chronic Kidney Disease Prediction With Reduced Individual Classifiers”. Electrica 18, no. 2 (August 2018): 249-55.
EndNote Doğruyol Başar M, Akan A (August 1, 2018) Chronic Kidney Disease Prediction with Reduced Individual Classifiers. Electrica 18 2 249–255.
IEEE M. Doğruyol Başar and A. Akan, “Chronic Kidney Disease Prediction with Reduced Individual Classifiers”, Electrica, vol. 18, no. 2, pp. 249–255, 2018.
ISNAD Doğruyol Başar, Merve - Akan, Aydın. “Chronic Kidney Disease Prediction With Reduced Individual Classifiers”. Electrica 18/2 (August 2018), 249-255.
JAMA Doğruyol Başar M, Akan A. Chronic Kidney Disease Prediction with Reduced Individual Classifiers. Electrica. 2018;18:249–255.
MLA Doğruyol Başar, Merve and Aydın Akan. “Chronic Kidney Disease Prediction With Reduced Individual Classifiers”. Electrica, vol. 18, no. 2, 2018, pp. 249-55.
Vancouver Doğruyol Başar M, Akan A. Chronic Kidney Disease Prediction with Reduced Individual Classifiers. Electrica. 2018;18(2):249-55.