Research Article
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Year 2025, Volume: 55 Issue: 2, 191 - 205, 23.09.2025
https://doi.org/10.26650/IstanbulJPharm.2025.1533301

Abstract

References

  • Andjelković, M., Van Camp, J., De Meulenaer, B., Depaemelaere, G., Socaciu, C., & Verloo, M., Verhe, R. (2006). Iron chelation properties of phenolic acids bearing catechol and galloyl groups. Food Chemistry, 98(1), 23-31. google scholar
  • Apak, R., Güçlü, K., Özyürek, M., Bektasoglu, B., & Bener, M. (2008). Cupric ion reducing antioxidant capacity assay for food antioxidants: Vitamins, polyphenolics, and flavonoids in food extracts. Methods in Molecular Biology, 477, 163-193. google scholar
  • Ben Sghaier, M., Skandrani, I., Nasr, N., Franca, M.G., Chekir-Ghedira, L., & Ghedira, K. (2011). Flavonoids and sesquiterpenes from Tecurium ramosissimum promote antiproliferation of human cancer cells and enhance antioxidant activity: A structure-activity relationship study. Environmental Toxicology and Pharma^ cology, 32(3), 336-348. google scholar
  • Blois, M.S. (1958). Antioxidant determinations by the use of a stable free radical. Nature, 181, 1199-1200. google scholar
  • Borodina, T.V., Filimonov, D.A., & Porokov, V.V. (1996). Computer-aided prediction of prodrug activity using the PASS system. Pharmaceutical Chemistry Journal, 30, 760-763. google scholar
  • Brand-Williams, W., Cuvelier, M.E., & Berset, C. (1995). Use of a free radical method to evaluate antioxidant activity. LWT ^ Food Science and Technology, 28(1), 25-30. google scholar
  • Brus, B., Kosak, V., Turk, S., Pišlar, A., Coquelle, N., Kos, J., Stojan, J., Colletier, J.P., & Gobec, S. (2014). Discovery, biological evaluation, and crystal structure of a novel nano-molar selective butyrylcholinesterase inhibitor. Journal of Medic^ inal Chemistry, 57(19), 8167-8179. google scholar
  • Chan, S., Kantham, S., Rao, V.M., Palanivelu, M.K., Pham, H.L., Shaw, P.N., McGeary, R.P., & Ross, B.P. (2016). Metal chelation, radical scavenging and inhibition of Aβ₄₂ fibrillation by food constituents in relation to Alzheimer's disease. Food Chemistry, 199, 185-194. google scholar
  • Chua, M.T., Tung, Y.T., & Chang, S.T. (2008). Antioxidant activities of ethanolic extracts from the twigs of Cinnamomum osmophleum. Bioresource Technology, 99(6), 1918-1925. google scholar
  • Dai, J., & Mumper, R.J. (2010). Plant phenolics: Extraction, analysis and their antioxidant and anticancer properties. Molecules, 15(10), 7313-7352. google scholar
  • De Souza Farias, S.A., da Costa, K.S., Martins, J.B.L. (2021). Analysis of conformational, structural, magnetic, and electronic properties related to antioxidant activity: Revisiting flavan, anthocyanidin, flavanone, flavonol, isoflavone, flavone, and flavan-3-ol. ACS Omega, 6(13), 8908-8918. google scholar
  • Ercan, L., & Doğru, M. (2022). Antioxidant and antimicrobial capacity of quinic acid. Bitlis Eren Üniversitesi Fen Bilimleri Dergisi, 11(4), 1018-1025. google scholar
  • Fernandez-Pastor, I., Fernandez-Hernandez, A., Rivas, F., Martinez, A., Garcia-Granados, A., & Parra, A. (2016). Synthesis and antioxidant activity of hydroxytyrosol alkyl-carbonate derivatives. Journal of Natural Products, 79(7), 1737-1745. google scholar
  • Firuzi, O., Lacanna, A., Petrucci, R., Marrosu, G., & Saso, L. (2005). Evaluation of the antioxidant activity of flavonoids by "ferric reducing antioxidant power" assay and cyclic voltammetry. Biochimica Biophysica Acta, 1721(1-3), 174-184. google scholar
  • Gfeller, D., Michielin, O., & Zoete, V. (2013). Shaping the interaction landscape of bioactive molecules. Bioinformatics, 29(23), 3073-3079. google scholar
  • Gulcin, I. (2020). Antioxidants and antioxidant methods: An updated overview. Archives of Toxicology, 94(3), 651-715. google scholar
  • https://database.ich.org/sites/default/files/M7_R1_Guideline.pdf (accessed on June, 2024). google scholar
  • Jing, P., Zhao, S.J., Jian, W.J., Qian, B.J., Dong, Y., & Pang, J. (2012). Quantitative studies on structure-DPPH• scavenging activity relationships of food phenolic acids. Molecules, 17(11), 12910-12924. google scholar
  • Munteanu, I.G., & Apetrei, C. (2021). Analytical methods used in determining antioxidant activity: A review. International Journal of Molecular Sciences, 22(7), 3380. google scholar
  • Oyaizu, M. (1986). Studies on products of browning reactions: antioxidative activities of product of browning reaction prepared from glucosamine. Japanese Journal of Nutrition, 44, 307-315. google scholar
  • Ross, J.A., & Kasum, C.M. (2002). Dietary flavonoids: Bioavailability, metabolic effects, and safety. Annual Reviews of Nutrition, 22, 19-34. google scholar
  • Sadef, Y., Javed, T., Javed, R., Mahmood, A., Alwahibi, M.S., Elshikh, M.S., AbdelGawwa, M.R., Alhaji, J.H., & Rasheed, R.A. (2022). Nutritional status, antioxidant activity and total phenolic content of different fruits and vegetables' peels. PLoS One, 17(5), e0265566. google scholar
  • Shen, N., Wang, T., Gan, Q., Liu, S., Wang, L., & Jin, B. (2022). Plant flavonoids: Classification, distribution, biosynthesis, and antioxidant activity. Food Chemistry, 383, 132531. google scholar
  • Sies, H. (2015). Oxidative stress: A concept in redox biology and medicine. Redox Biology, 4, 180-183. google scholar
  • Skroza, D., Šimat, V., Vrdoljak, L., Jolić, N., Skelin, A., Čagalj, M., Frleta, R., & Generalić Mekinić, I. (2022). Investigation of antioxidant synergisms and antagonisms among phenolic acids in the model matrices using FRAP and ORAC methods. Antioxidants (Basel), 11(9), 1784. google scholar
  • Stankevičius, M., Akuņeca, I., Jãkobsone, I., & Maruška A. (2011). Comparative analysis of radical scavenging and antioxidant activity of phenolic compounds present in everyday use spice plants by means of spectrophotometric and chromatographic methods. Journal of Separation Science, 34(11), 1261-1267. google scholar
  • Tan, B.L., Norhaizan, M.E., & Liew, W.P. (2018). Nutrients and oxidative stress: Friend or foe? Oxidative Medicine and Cell Longevity, 2018, 9719584. google scholar
  • Zheng, C.D., Li, G., Li, H.Q., Xu, X.J., Gao, J.M., & Zhang, A.L. (2010). DPPH-scavenging activities and structure-activity relationships of phenolic compounds. Natural Product Communications, 5(11), 1759-1765. google scholar
  • Zorić, N., Kopjar, N., Rodriguez, J.V., Tomić, S., & Kosalec, I. (2021). Protective effects of olive oil phenolics oleuropein and hydroxytyrosol against hydrogen peroxideinduced DNA damage in human peripheral lymphocytes. Acta Pharmaceutica, 71(1), 131-141. google scholar

Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics

Year 2025, Volume: 55 Issue: 2, 191 - 205, 23.09.2025
https://doi.org/10.26650/IstanbulJPharm.2025.1533301

Abstract

Background and Aim: Oxidative stress is a major contributing factor in the pathogenesis of many diseases. However, approaches to reduce oxidative stress, such as the use of antioxidants, are thought to be potentially protective. Towards this goal, the antioxidant potential of 38 plant phenolics from various chemical classes was screened through in vitro methods in the current work.

Methods: The phenolic compounds were tested for their metal chelation and 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging activity along with copper-reducing antioxidant capacity (CUPRAC) and ferric-reducing antioxidant power (FRAP) assays at 10 mM. In silico toxicity and adverse effect estimations, as well as the potential bioactivity probabilities of the compounds, were assessed through PASS and Swiss prediction programs.

Results: All the tested compounds displayed metal chelation activity below 50%, while the highest chelating capacity was exhibited by vitexin (44.12 ± 0.09%). Twenty-two of the compounds displayed a scavenging effect of over 50%, where the highest scavenging effect was caused by oleuropein (87.05 ± 0.05%). In the CUPRAC and FRAP assays, all compounds exhibited remarkable levels of antioxidant activity. The most active ones in the CUPRAC assay were lined up according to their absorbance values as compared to quercetin (3.99 ± 0.01, the reference) as isoquercitrin (3.99 ± 0.01), luteolin (3.96 ± 0.05), myricetin (3.78 ± 0.11), kaempferol (3.60 ± 0.28), morin (3.48 ± 0.26), catechin (3.33 ± 0.28), and hyperoside (3.11 ± 0.50). All compounds possessed FRAP values close to or better than the reference (i.e., quercetin). Our data reveals that the tested phenolics match well with the in silico estimations considering their antioxidant effects, which is the in silico first data on them in this regard.

Conclusion: Our extensive screening indicated oleuropein, gallic acid, taxifolin, rosmarinic acid, catechin, quercetin, kaempferol, luteolin, myricetin, hyperoside, morin, isoquercitrin, fisetin, epigallocatechin gallate, and vitexin as the most promising phenolic antioxidants in the current work.

References

  • Andjelković, M., Van Camp, J., De Meulenaer, B., Depaemelaere, G., Socaciu, C., & Verloo, M., Verhe, R. (2006). Iron chelation properties of phenolic acids bearing catechol and galloyl groups. Food Chemistry, 98(1), 23-31. google scholar
  • Apak, R., Güçlü, K., Özyürek, M., Bektasoglu, B., & Bener, M. (2008). Cupric ion reducing antioxidant capacity assay for food antioxidants: Vitamins, polyphenolics, and flavonoids in food extracts. Methods in Molecular Biology, 477, 163-193. google scholar
  • Ben Sghaier, M., Skandrani, I., Nasr, N., Franca, M.G., Chekir-Ghedira, L., & Ghedira, K. (2011). Flavonoids and sesquiterpenes from Tecurium ramosissimum promote antiproliferation of human cancer cells and enhance antioxidant activity: A structure-activity relationship study. Environmental Toxicology and Pharma^ cology, 32(3), 336-348. google scholar
  • Blois, M.S. (1958). Antioxidant determinations by the use of a stable free radical. Nature, 181, 1199-1200. google scholar
  • Borodina, T.V., Filimonov, D.A., & Porokov, V.V. (1996). Computer-aided prediction of prodrug activity using the PASS system. Pharmaceutical Chemistry Journal, 30, 760-763. google scholar
  • Brand-Williams, W., Cuvelier, M.E., & Berset, C. (1995). Use of a free radical method to evaluate antioxidant activity. LWT ^ Food Science and Technology, 28(1), 25-30. google scholar
  • Brus, B., Kosak, V., Turk, S., Pišlar, A., Coquelle, N., Kos, J., Stojan, J., Colletier, J.P., & Gobec, S. (2014). Discovery, biological evaluation, and crystal structure of a novel nano-molar selective butyrylcholinesterase inhibitor. Journal of Medic^ inal Chemistry, 57(19), 8167-8179. google scholar
  • Chan, S., Kantham, S., Rao, V.M., Palanivelu, M.K., Pham, H.L., Shaw, P.N., McGeary, R.P., & Ross, B.P. (2016). Metal chelation, radical scavenging and inhibition of Aβ₄₂ fibrillation by food constituents in relation to Alzheimer's disease. Food Chemistry, 199, 185-194. google scholar
  • Chua, M.T., Tung, Y.T., & Chang, S.T. (2008). Antioxidant activities of ethanolic extracts from the twigs of Cinnamomum osmophleum. Bioresource Technology, 99(6), 1918-1925. google scholar
  • Dai, J., & Mumper, R.J. (2010). Plant phenolics: Extraction, analysis and their antioxidant and anticancer properties. Molecules, 15(10), 7313-7352. google scholar
  • De Souza Farias, S.A., da Costa, K.S., Martins, J.B.L. (2021). Analysis of conformational, structural, magnetic, and electronic properties related to antioxidant activity: Revisiting flavan, anthocyanidin, flavanone, flavonol, isoflavone, flavone, and flavan-3-ol. ACS Omega, 6(13), 8908-8918. google scholar
  • Ercan, L., & Doğru, M. (2022). Antioxidant and antimicrobial capacity of quinic acid. Bitlis Eren Üniversitesi Fen Bilimleri Dergisi, 11(4), 1018-1025. google scholar
  • Fernandez-Pastor, I., Fernandez-Hernandez, A., Rivas, F., Martinez, A., Garcia-Granados, A., & Parra, A. (2016). Synthesis and antioxidant activity of hydroxytyrosol alkyl-carbonate derivatives. Journal of Natural Products, 79(7), 1737-1745. google scholar
  • Firuzi, O., Lacanna, A., Petrucci, R., Marrosu, G., & Saso, L. (2005). Evaluation of the antioxidant activity of flavonoids by "ferric reducing antioxidant power" assay and cyclic voltammetry. Biochimica Biophysica Acta, 1721(1-3), 174-184. google scholar
  • Gfeller, D., Michielin, O., & Zoete, V. (2013). Shaping the interaction landscape of bioactive molecules. Bioinformatics, 29(23), 3073-3079. google scholar
  • Gulcin, I. (2020). Antioxidants and antioxidant methods: An updated overview. Archives of Toxicology, 94(3), 651-715. google scholar
  • https://database.ich.org/sites/default/files/M7_R1_Guideline.pdf (accessed on June, 2024). google scholar
  • Jing, P., Zhao, S.J., Jian, W.J., Qian, B.J., Dong, Y., & Pang, J. (2012). Quantitative studies on structure-DPPH• scavenging activity relationships of food phenolic acids. Molecules, 17(11), 12910-12924. google scholar
  • Munteanu, I.G., & Apetrei, C. (2021). Analytical methods used in determining antioxidant activity: A review. International Journal of Molecular Sciences, 22(7), 3380. google scholar
  • Oyaizu, M. (1986). Studies on products of browning reactions: antioxidative activities of product of browning reaction prepared from glucosamine. Japanese Journal of Nutrition, 44, 307-315. google scholar
  • Ross, J.A., & Kasum, C.M. (2002). Dietary flavonoids: Bioavailability, metabolic effects, and safety. Annual Reviews of Nutrition, 22, 19-34. google scholar
  • Sadef, Y., Javed, T., Javed, R., Mahmood, A., Alwahibi, M.S., Elshikh, M.S., AbdelGawwa, M.R., Alhaji, J.H., & Rasheed, R.A. (2022). Nutritional status, antioxidant activity and total phenolic content of different fruits and vegetables' peels. PLoS One, 17(5), e0265566. google scholar
  • Shen, N., Wang, T., Gan, Q., Liu, S., Wang, L., & Jin, B. (2022). Plant flavonoids: Classification, distribution, biosynthesis, and antioxidant activity. Food Chemistry, 383, 132531. google scholar
  • Sies, H. (2015). Oxidative stress: A concept in redox biology and medicine. Redox Biology, 4, 180-183. google scholar
  • Skroza, D., Šimat, V., Vrdoljak, L., Jolić, N., Skelin, A., Čagalj, M., Frleta, R., & Generalić Mekinić, I. (2022). Investigation of antioxidant synergisms and antagonisms among phenolic acids in the model matrices using FRAP and ORAC methods. Antioxidants (Basel), 11(9), 1784. google scholar
  • Stankevičius, M., Akuņeca, I., Jãkobsone, I., & Maruška A. (2011). Comparative analysis of radical scavenging and antioxidant activity of phenolic compounds present in everyday use spice plants by means of spectrophotometric and chromatographic methods. Journal of Separation Science, 34(11), 1261-1267. google scholar
  • Tan, B.L., Norhaizan, M.E., & Liew, W.P. (2018). Nutrients and oxidative stress: Friend or foe? Oxidative Medicine and Cell Longevity, 2018, 9719584. google scholar
  • Zheng, C.D., Li, G., Li, H.Q., Xu, X.J., Gao, J.M., & Zhang, A.L. (2010). DPPH-scavenging activities and structure-activity relationships of phenolic compounds. Natural Product Communications, 5(11), 1759-1765. google scholar
  • Zorić, N., Kopjar, N., Rodriguez, J.V., Tomić, S., & Kosalec, I. (2021). Protective effects of olive oil phenolics oleuropein and hydroxytyrosol against hydrogen peroxideinduced DNA damage in human peripheral lymphocytes. Acta Pharmaceutica, 71(1), 131-141. google scholar
There are 29 citations in total.

Details

Primary Language English
Subjects Pharmacognosy
Journal Section Original Article
Authors

Tuğba Uçar Akyürek 0000-0003-3105-8494

Meltem Karaküçük 0009-0002-0684-4135

Esra Emerce 0000-0003-4069-7941

Fatma Sezer Şenol Deniz 0000-0002-5850-9841

İlkay Erdoğan Orhan 0000-0002-7379-5436

Publication Date September 23, 2025
Submission Date August 14, 2024
Acceptance Date March 25, 2025
Published in Issue Year 2025 Volume: 55 Issue: 2

Cite

APA Uçar Akyürek, T., Karaküçük, M., Emerce, E., … Şenol Deniz, F. S. (2025). Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics. İstanbul Journal of Pharmacy, 55(2), 191-205. https://doi.org/10.26650/IstanbulJPharm.2025.1533301
AMA Uçar Akyürek T, Karaküçük M, Emerce E, Şenol Deniz FS, Erdoğan Orhan İ. Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics. iujp. September 2025;55(2):191-205. doi:10.26650/IstanbulJPharm.2025.1533301
Chicago Uçar Akyürek, Tuğba, Meltem Karaküçük, Esra Emerce, Fatma Sezer Şenol Deniz, and İlkay Erdoğan Orhan. “Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics”. İstanbul Journal of Pharmacy 55, no. 2 (September 2025): 191-205. https://doi.org/10.26650/IstanbulJPharm.2025.1533301.
EndNote Uçar Akyürek T, Karaküçük M, Emerce E, Şenol Deniz FS, Erdoğan Orhan İ (September 1, 2025) Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics. İstanbul Journal of Pharmacy 55 2 191–205.
IEEE T. Uçar Akyürek, M. Karaküçük, E. Emerce, F. S. Şenol Deniz, and İ. Erdoğan Orhan, “Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics”, iujp, vol. 55, no. 2, pp. 191–205, 2025, doi: 10.26650/IstanbulJPharm.2025.1533301.
ISNAD Uçar Akyürek, Tuğba et al. “Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics”. İstanbul Journal of Pharmacy 55/2 (September2025), 191-205. https://doi.org/10.26650/IstanbulJPharm.2025.1533301.
JAMA Uçar Akyürek T, Karaküçük M, Emerce E, Şenol Deniz FS, Erdoğan Orhan İ. Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics. iujp. 2025;55:191–205.
MLA Uçar Akyürek, Tuğba et al. “Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics”. İstanbul Journal of Pharmacy, vol. 55, no. 2, 2025, pp. 191-05, doi:10.26650/IstanbulJPharm.2025.1533301.
Vancouver Uçar Akyürek T, Karaküçük M, Emerce E, Şenol Deniz FS, Erdoğan Orhan İ. Antioxidant Profiling, In Silico Toxicity, and Virtual Bioactivity Assessment of Selected Plant-Derived Phenolics. iujp. 2025;55(2):191-205.