Research Article
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Year 2020, Volume: 10 Issue: 03, 144 - 153, 15.09.2020
https://doi.org/10.5799/jmid.790286

Abstract

References

  • 1. Alexander JAN, Chatterjee SS, Hamilton SM, et al. Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance in Staphylococcus aureus. Journal of Biological Chemistry 2018; 293: 19854–19865.
  • 2. Frank DN, Feazel LM, Bessesen MT, et al. The human nasal microbiota and Staphylococcus aureus carriage. PloS one 2010; 5: e10598.
  • 3. Akgül Ö, Çetin Y, Bora G, et al. Evaluation of MecA Gene Occurrence of Gram-Positive Bacteria Isolated from Patients with Otitis. Microbiology Research Journal International 2018; 1–8.
  • 4. Bagnoli F, Rappuoli R, Grandi G. Staphylococcus aureus: Microbiology, Pathology, Immunology, Therapy and Prophylaxis. Springer, 2018.
  • 5. McCarthy AJ, Lindsay JA. Genetic variation in Staphylococcus aureus surface and immune evasion genes is lineage associated: implications for vaccine design and host-pathogen interactions. BMC microbiology 2010; 10: 173.
  • 6. Manjul AS, Shirkot P. 16S rRNA gene sequencing for bacterial identification of pullulanase synthesizing thermophilic bacteria contributing to big data. IJCS 2018; 6: 2769–2773.
  • 7. Singh G, Broor S, Agarwal P. Molecular characterisation of Staphylococcus aureus using spa typing as a diagnostic tool in Haryana, India. Indian journal of medical microbiology 2018; 36: 26.
  • 8. Aklilu E, Hui Ying C. First mecC and mecA Positive Livestock-Associated Methicillin Resistant Staphylococcus aureus (mecC MRSA/LA-MRSA) from Dairy Cattle in Malaysia. Microorganisms 2020; 8: 147.
  • 9. Dilnessa T, Bitew A. Prevalence and antimicrobial susceptibility pattern of methicillin resistant Staphylococcus aureus isolated from clinical samples at Yekatit 12 Hospital Medical College, Addis Ababa, Ethiopia. BMC infectious diseases 2016; 16: 398.
  • 10. [Antonio L, Simon JP, Jegathese O, et al. Making Inexpensive Insulin Using Microalgae. Experiment - Moving Science Forward,
  • https://experiment.com/projects/support-our-efforts-to-demonstrate-that-insulin-and-oral-vaccines-can-be-cheaply-made-in-microalgae/methods (2016, accessed 30 May 2020).
  • 11. Bien H. QIAgen DNeasy Blood & Tissue kit, cultured cells. Epub ahead of print 10 September 2015. DOI: 10.17504/protocols.io. dsz6f5.
  • 12. Giske CG, Dyrkell F, Arnellos D, et al. Transmission events and antimicrobial susceptibilities of methicillin-resistant Staphylococcus argenteus in Stockholm. Clinical Microbiology and Infection 2019; 25: 1289–e5.
  • 13. Cha W, Mosci RE, Wengert SL, et al. Comparing the Genetic Diversity and Antimicrobial Resistance Profiles of Campylobacter jejuni Recovered from Cattle and Humans. Front Microbiol; 8. Epub ahead of print 2017. DOI: 10.3389/fmicb.2017.00818.
  • 14. Velázquez-Guadarrama N, Olivares-Cervantes AL, Salinas E, et al. Presence of environmental coagulase-positive staphylococci, their clonal relationship, resistance factors and ability to form biofilm. Revista Argentina de Microbiología 2017; 49: 15–23.
  • 15. Elhassan MM, Ozbak HA, Hemeg HA, et al. Absence of the mecA gene in methicillin resistant Staphylococcus aureus isolated from different clinical specimens in shendi city, Sudan. BioMed research international; 2015.
  • 16. Akpaka PE, Roberts R, Monecke S. Molecular characterization of antimicrobial resistance genes against Staphylococcus aureus isolates from Trinidad and Tobago. Journal of Infection and Public Health 2017; 10: 316–323.
  • 17. Vali L, Dashti AA, Mathew F, et al. Characterization of Heterogeneous MRSA and MSSA with Reduced Susceptibility to Chlorhexidine in Kuwaiti Hospitals. Frontiers in Microbiology; 8. Epub ahead of print 20 July 2017. DOI: 10.3389/fmicb.2017.01359.
  • 18. Thong K, Hanifah Y, Lim K, et al. ermA, ermC , tetM and tetK are essential for erythromycin and tetracycline resistance among methicillin-resistant Staphylococcus aureus strains isolated from a tertiary hospital in Malaysia. Indian Journal of Medical Microbiology 2012; 30: 203.
  • 19. Liu P, Xue H, Wu Z, et al. Effect of bla regulators on the susceptible phenotype and phenotypic conversion for oxacillin-susceptible mecA -positive staphylococcal isolates. Journal of Antimicrobial Chemotherapy 2016; 71: 2105–2112.
  • 20. Milheiriço C, Portelinha A, Krippahl L, et al. Evidence for a purifying selection acting on the β-lactamase locus in epidemic clones of methicillin-resistant Staphylococcus aureus. BMC microbiology 2011; 11: 76.
  • 21. Dönhöfer A, Franckenberg S, Wickles S, et al. Structural basis for TetM-mediated tetracycline resistance. PNAS 2012; 109: 16900–16905.
  • 22. Roberts MC. Tetracyclines: Mode of Action and their Bacterial Mechanisms of Resistance. In: Bonev BB, Brown NM (eds) Bacterial Resistance to Antibiotics – From Molecules to Man. Wiley, pp. 101–124.
  • 23. Emaneini M, Bigverdi R, Kalantar D, et al. Distribution of genes encoding tetracycline resistance and aminoglycoside modifying enzymes in Staphylococcus aureus strains isolated from a burn center. Ann Burns Fire Disasters 2013; 26: 76–80.
  • 24. Worthing KA, Abraham S, Coombs GW, et al. Clonal diversity and geographic distribution of methicillin-resistant Staphylococcus pseudintermedius from Australian animals: discovery of novel sequence types. Veterinary microbiology 2018; 213: 58–65.
  • 25. Jones RN, Ross JE, Castanheira M, et al. United States resistance surveillance results for linezolid (LEADER Program for 2007). Diagnostic Microbiology and Infectious Disease 2008; 62: 416–426.
  • 26. Eko KE, Forshey BM, Carrel M, et al. Molecular characterization of methicillin-resistant Staphylococcus aureus (MRSA) nasal colonization and infection isolates in a Veterans Affairs hospital. Antimicrob Resist Infect Control 2015; 4: 10.
  • 27. Senok A, Ehricht R, Monecke S, et al. Molecular characterization of methicillin-resistant Staphylococcus aureus in nosocomial infections in a tertiary-care facility: emergence of new clonal complexes in Saudi Arabia. New Microbes and New Infections 2016; 14: 13–18.
  • 28. Calfee DP. Trends in Community Versus Health Care-Acquired Methicillin-Resistant Staphylococcus aureus Infections. Current infectious disease reports 2017; 19: 48.
  • 29. Al-Ruwaili MA. The coa, mec, and spa Genes Diversity among Methicillin‑resistant Staphylococcus aureus Strains from Health‑care Workers and Patients. Nigerian Journal of Clinical Practice | 2018; 21: 1065–1074.
  • 30. Rigi G, Ghaedmohammadi S, Ahmadian G. A comprehensive review on staphylococcal protein A (Spa): Its production and applications. Biotechnology and Applied Biochemistry 2019; 66: 454–464.

Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR

Year 2020, Volume: 10 Issue: 03, 144 - 153, 15.09.2020
https://doi.org/10.5799/jmid.790286

Abstract

Objectives: Methicillin resistant Staphylococcus aureus (MRSA) nasal carriage often precedes infection. This work aims to genetically profile the MRSA carriage of resistant genes (mecA, blaZ and tetM) and certain virulence genes (nuc, pvl, spa and scn) obtained from human nasal cavity.
Methods: Phenotypically confirmed Staphylococcus aureus were Screened for oxacillin resistance and assessed for β-lactamase production. Further confirmation of identity obtained by multiplex PCR of the 16SrRNA, mecA, tetM, pvl, nuc, spa and scn genes. DNA gel fingerprint analysis was carried out and the bands were clustered in a dendrogram.
Results: The study analysed 81 Staphylococcus aureus isolates for Methicillin resistance out of which 38 (46.9%) were MRSA. The DNA extraction method was effective for all MRSA isolates evaluated. All phenotypic MRSA isolates (100%) were positive for the S. aureus specific 16SrRNA gene confirming that these isolates were S. aureus strains. The nuc gene was detected in 19/38 (50%) of the MRSA isolates, blaZ gene in 14/38 (36.8%) and tetM in 18/38 (47.4%).
Conclusions: The need for improved vigilance to recognize MRSA strains cannot be overemphasized. If MRSA control is not tracked, these strains will increase exponentially. J Microbiol Infect Dis 2020; 10(3):144-153.

References

  • 1. Alexander JAN, Chatterjee SS, Hamilton SM, et al. Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance in Staphylococcus aureus. Journal of Biological Chemistry 2018; 293: 19854–19865.
  • 2. Frank DN, Feazel LM, Bessesen MT, et al. The human nasal microbiota and Staphylococcus aureus carriage. PloS one 2010; 5: e10598.
  • 3. Akgül Ö, Çetin Y, Bora G, et al. Evaluation of MecA Gene Occurrence of Gram-Positive Bacteria Isolated from Patients with Otitis. Microbiology Research Journal International 2018; 1–8.
  • 4. Bagnoli F, Rappuoli R, Grandi G. Staphylococcus aureus: Microbiology, Pathology, Immunology, Therapy and Prophylaxis. Springer, 2018.
  • 5. McCarthy AJ, Lindsay JA. Genetic variation in Staphylococcus aureus surface and immune evasion genes is lineage associated: implications for vaccine design and host-pathogen interactions. BMC microbiology 2010; 10: 173.
  • 6. Manjul AS, Shirkot P. 16S rRNA gene sequencing for bacterial identification of pullulanase synthesizing thermophilic bacteria contributing to big data. IJCS 2018; 6: 2769–2773.
  • 7. Singh G, Broor S, Agarwal P. Molecular characterisation of Staphylococcus aureus using spa typing as a diagnostic tool in Haryana, India. Indian journal of medical microbiology 2018; 36: 26.
  • 8. Aklilu E, Hui Ying C. First mecC and mecA Positive Livestock-Associated Methicillin Resistant Staphylococcus aureus (mecC MRSA/LA-MRSA) from Dairy Cattle in Malaysia. Microorganisms 2020; 8: 147.
  • 9. Dilnessa T, Bitew A. Prevalence and antimicrobial susceptibility pattern of methicillin resistant Staphylococcus aureus isolated from clinical samples at Yekatit 12 Hospital Medical College, Addis Ababa, Ethiopia. BMC infectious diseases 2016; 16: 398.
  • 10. [Antonio L, Simon JP, Jegathese O, et al. Making Inexpensive Insulin Using Microalgae. Experiment - Moving Science Forward,
  • https://experiment.com/projects/support-our-efforts-to-demonstrate-that-insulin-and-oral-vaccines-can-be-cheaply-made-in-microalgae/methods (2016, accessed 30 May 2020).
  • 11. Bien H. QIAgen DNeasy Blood & Tissue kit, cultured cells. Epub ahead of print 10 September 2015. DOI: 10.17504/protocols.io. dsz6f5.
  • 12. Giske CG, Dyrkell F, Arnellos D, et al. Transmission events and antimicrobial susceptibilities of methicillin-resistant Staphylococcus argenteus in Stockholm. Clinical Microbiology and Infection 2019; 25: 1289–e5.
  • 13. Cha W, Mosci RE, Wengert SL, et al. Comparing the Genetic Diversity and Antimicrobial Resistance Profiles of Campylobacter jejuni Recovered from Cattle and Humans. Front Microbiol; 8. Epub ahead of print 2017. DOI: 10.3389/fmicb.2017.00818.
  • 14. Velázquez-Guadarrama N, Olivares-Cervantes AL, Salinas E, et al. Presence of environmental coagulase-positive staphylococci, their clonal relationship, resistance factors and ability to form biofilm. Revista Argentina de Microbiología 2017; 49: 15–23.
  • 15. Elhassan MM, Ozbak HA, Hemeg HA, et al. Absence of the mecA gene in methicillin resistant Staphylococcus aureus isolated from different clinical specimens in shendi city, Sudan. BioMed research international; 2015.
  • 16. Akpaka PE, Roberts R, Monecke S. Molecular characterization of antimicrobial resistance genes against Staphylococcus aureus isolates from Trinidad and Tobago. Journal of Infection and Public Health 2017; 10: 316–323.
  • 17. Vali L, Dashti AA, Mathew F, et al. Characterization of Heterogeneous MRSA and MSSA with Reduced Susceptibility to Chlorhexidine in Kuwaiti Hospitals. Frontiers in Microbiology; 8. Epub ahead of print 20 July 2017. DOI: 10.3389/fmicb.2017.01359.
  • 18. Thong K, Hanifah Y, Lim K, et al. ermA, ermC , tetM and tetK are essential for erythromycin and tetracycline resistance among methicillin-resistant Staphylococcus aureus strains isolated from a tertiary hospital in Malaysia. Indian Journal of Medical Microbiology 2012; 30: 203.
  • 19. Liu P, Xue H, Wu Z, et al. Effect of bla regulators on the susceptible phenotype and phenotypic conversion for oxacillin-susceptible mecA -positive staphylococcal isolates. Journal of Antimicrobial Chemotherapy 2016; 71: 2105–2112.
  • 20. Milheiriço C, Portelinha A, Krippahl L, et al. Evidence for a purifying selection acting on the β-lactamase locus in epidemic clones of methicillin-resistant Staphylococcus aureus. BMC microbiology 2011; 11: 76.
  • 21. Dönhöfer A, Franckenberg S, Wickles S, et al. Structural basis for TetM-mediated tetracycline resistance. PNAS 2012; 109: 16900–16905.
  • 22. Roberts MC. Tetracyclines: Mode of Action and their Bacterial Mechanisms of Resistance. In: Bonev BB, Brown NM (eds) Bacterial Resistance to Antibiotics – From Molecules to Man. Wiley, pp. 101–124.
  • 23. Emaneini M, Bigverdi R, Kalantar D, et al. Distribution of genes encoding tetracycline resistance and aminoglycoside modifying enzymes in Staphylococcus aureus strains isolated from a burn center. Ann Burns Fire Disasters 2013; 26: 76–80.
  • 24. Worthing KA, Abraham S, Coombs GW, et al. Clonal diversity and geographic distribution of methicillin-resistant Staphylococcus pseudintermedius from Australian animals: discovery of novel sequence types. Veterinary microbiology 2018; 213: 58–65.
  • 25. Jones RN, Ross JE, Castanheira M, et al. United States resistance surveillance results for linezolid (LEADER Program for 2007). Diagnostic Microbiology and Infectious Disease 2008; 62: 416–426.
  • 26. Eko KE, Forshey BM, Carrel M, et al. Molecular characterization of methicillin-resistant Staphylococcus aureus (MRSA) nasal colonization and infection isolates in a Veterans Affairs hospital. Antimicrob Resist Infect Control 2015; 4: 10.
  • 27. Senok A, Ehricht R, Monecke S, et al. Molecular characterization of methicillin-resistant Staphylococcus aureus in nosocomial infections in a tertiary-care facility: emergence of new clonal complexes in Saudi Arabia. New Microbes and New Infections 2016; 14: 13–18.
  • 28. Calfee DP. Trends in Community Versus Health Care-Acquired Methicillin-Resistant Staphylococcus aureus Infections. Current infectious disease reports 2017; 19: 48.
  • 29. Al-Ruwaili MA. The coa, mec, and spa Genes Diversity among Methicillin‑resistant Staphylococcus aureus Strains from Health‑care Workers and Patients. Nigerian Journal of Clinical Practice | 2018; 21: 1065–1074.
  • 30. Rigi G, Ghaedmohammadi S, Ahmadian G. A comprehensive review on staphylococcal protein A (Spa): Its production and applications. Biotechnology and Applied Biochemistry 2019; 66: 454–464.
There are 31 citations in total.

Details

Primary Language English
Subjects Health Care Administration
Journal Section Research Article
Authors

Shuaibu Suleiman Adeiza This is me

Josiah Ademola Onaolapo This is me

Busayo Olalekan Olayınka This is me

Publication Date September 15, 2020
Published in Issue Year 2020 Volume: 10 Issue: 03

Cite

APA Adeiza, S. S., Onaolapo, J. A., & Olayınka, B. O. (2020). Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR. Journal of Microbiology and Infectious Diseases, 10(03), 144-153. https://doi.org/10.5799/jmid.790286
AMA Adeiza SS, Onaolapo JA, Olayınka BO. Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR. J Microbil Infect Dis. September 2020;10(03):144-153. doi:10.5799/jmid.790286
Chicago Adeiza, Shuaibu Suleiman, Josiah Ademola Onaolapo, and Busayo Olalekan Olayınka. “Genetic Profiling of Methicillin-Resistant Staphylococcus Aureus in An African Hospital by Multiplex-PCR”. Journal of Microbiology and Infectious Diseases 10, no. 03 (September 2020): 144-53. https://doi.org/10.5799/jmid.790286.
EndNote Adeiza SS, Onaolapo JA, Olayınka BO (September 1, 2020) Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR. Journal of Microbiology and Infectious Diseases 10 03 144–153.
IEEE S. S. Adeiza, J. A. Onaolapo, and B. O. Olayınka, “Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR”, J Microbil Infect Dis, vol. 10, no. 03, pp. 144–153, 2020, doi: 10.5799/jmid.790286.
ISNAD Adeiza, Shuaibu Suleiman et al. “Genetic Profiling of Methicillin-Resistant Staphylococcus Aureus in An African Hospital by Multiplex-PCR”. Journal of Microbiology and Infectious Diseases 10/03 (September 2020), 144-153. https://doi.org/10.5799/jmid.790286.
JAMA Adeiza SS, Onaolapo JA, Olayınka BO. Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR. J Microbil Infect Dis. 2020;10:144–153.
MLA Adeiza, Shuaibu Suleiman et al. “Genetic Profiling of Methicillin-Resistant Staphylococcus Aureus in An African Hospital by Multiplex-PCR”. Journal of Microbiology and Infectious Diseases, vol. 10, no. 03, 2020, pp. 144-53, doi:10.5799/jmid.790286.
Vancouver Adeiza SS, Onaolapo JA, Olayınka BO. Genetic Profiling of Methicillin-resistant Staphylococcus aureus in An African Hospital by Multiplex-PCR. J Microbil Infect Dis. 2020;10(03):144-53.