BibTex RIS Cite

Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital

Year 2014, Volume: 4 Issue: 04, 145 - 151, 01.12.2014
https://doi.org/10.5799/ahinjs.02.2014.04.0158

Abstract

Objective: The aim of this study was to investigate the molecular characteristics of carbapenem-resistant Enterobacteria­ceae (CRE) isolates from a teaching hospital in Guangdong, China, during the period between January 2008 and December 2011. Methods: A total of 28 (0.9%) CRE isolates were collected among 3286 isolates. Antimicrobial susceptibility testing, Modified Hodge Test (MHT) and genotyping by pulsed-field gel electrophoresis were performed. Extended-spectrum β-lactamase (ESBL) and carbapenemase genes were detected using gene amplification and sequencing. Outer membrane porin (OMP) genes (OmpK35/OmpK36 for K. pneumoniae, OmpC/OmpF for E. cloacae were examined. Results: Seven (25.0%) isolates of the 28 carbapenem resistant Enterobacteriaceae had a positive MHT. PCR and sequenc­ing analysis revealed that 19 of the 28 isolates were molecularly confirmed to harbor ESBLs (15 isolates, 53.6%), AmpC (6 isolates, 21.4%), or IMP-4 (five isolates, 17.9%), and nine (32.1%) isolates of the 28 isolates possessed at least two different classes of β-lactamases. Specially, five (71.4%) of seven MHT-positive CRE isolates is due to the production of the carbapen­emase-encoding gene IMP-4. Almost all of the CRE isolates in the present study loss gene expressions of OmpK35 and/or OmpK36 in K. pneumoniae, OmpC and/or OmpF in E. cloacae, except for one K. pneumoniae. PFGE analysis demonstrated genomic variability. Conclusion: Carbapenem resistance in Enterobacteriaceae is due to the combined effect of β- lactamases with porin im­permeability caused by loss of OMPs observed in these organisms. To prevent both CRE transmission and infections has become significantly urgent public health objectives.

References

  • Brink AJ, Feldman C, Grolman DC, et al. Appropriate use of the carbapenems. S Afr Med J 2004; 94:857-861.
  • Rhomberg P R, Jones R N. Summary trends for the Me- ropenem Yearly Susceptibility Test Information Collection Program: a 10-year experience in the United States (1999- 2008). Diagn Microbiol Infect Dis 2009; 65:414-426.
  • Hidron AI, Edwards JR, Patel J, et al. NHSN annual update: antimicrobial-resistant pathogens associated with health- care-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect Control Hosp Epidemiol 2008; 29:996-1011.
  • Livermore DM, Woodford N. The beta-lactamase threat in En- terobacteriaceae, Pseudomonas and Acinetobacter. Trends Microbiol 2006; 14:413-420.
  • Nordmann P, Naas T, Poirel L. Global spread of Carbapene- mase-producing Enterobacteriaceae. Emerg Infect Dis 2011; 17:1791-1798.
  • Doumith M, Ellington M J, Livermore D M, et al. Molecular mechanisms disrupting porin expression in ertapenem-resis- tant Klebsiella and Enterobacter spp. clinical isolates from the UK. J Antimicrob Chemother 2009; 63:659-667.
  • Kim S Y, Park Y J, Yu J K, et al. Prevalence and mechanisms of decreased susceptibility to carbapenems in Klebsiella pneu- moniae isolates. Diagn Microbiol Infect Dis 2007; 57:85-91.
  • Wang X D, Cai J C, Zhou H W, et al. Reduced susceptibility to carbapenems in Klebsiella pneumoniae clinical isolates associated with plasmid-mediated beta-lactamase produc- tion and OmpK36 porin deficiency. J Med Microbiol 2009; 58:1196-1202.
  • Cai J C, Zhou H W, Zhang R, et al. Emergence of Serratia marcescens, Klebsiella pneumoniae, and Escherichia coli Isolates possessing the plasmid-mediated carbapenem- hydrolyzing beta-lactamase KPC-2 in intensive care units of a Chinese hospital. Antimicrob Agents Chemother 2008; 52:2014-2018.
  • Yu F, Ying Q, Chen C, et al. Outbreak of pulmonary infec- tion caused by Klebsiella pneumoniae isolates harbouring blaIMP-4 and blaDHA-1 in a neonatal intensive care unit in China. J Med Microbiol 2012; 61:984-989.
  • Wei Z, Yu T, Qi Y, et al. Coexistence of plasmid-mediated KPC-2 and IMP-4 carbapenemases in isolates of Kleb- siella pneumoniae from China. J Antimicrob Chemother 2011;66:2670-2671.
  • Yan J J, Ko W C, Wu H M, et al. Complexity of Klebsiella pneumoniae isolates resistant to both cephamycins and extended-spectrum cephalosporins at a teaching hospital in Taiwan. J Clin Microbiol 2004;42:5337-5340.
  • Yigit H, Queenan A M, Anderson G J, et al. Novel carbape- nem-hydrolyzing beta-lactamase, KPC-1, from a carbape- nem-resistant strain of Klebsiella pneumoniae. Antimicrob Agents Chemother 2001;45:1151-1161.
  • Queenan A M, Bush K. Carbapenemases: the versatile beta- lactamases. Clin Microbiol Rev 2007; 20:440-458.
  • Poirel L, Benouda A, Hays C, et al. Emergence of NDM- 1-producing Klebsiella pneumoniae in Morocco. J Antimicrob Chemother 2011;66:2781-2783.
  • Dai W, Sun S, Yang P, et al. Characterization of carbapen- emases, extended spectrum beta-lactamases and molecular epidemiology of carbapenem-non-susceptible Enterobacter cloacae in a Chinese hospital in Chongqing]. Infect Genet Evol 2013; 14:1-7.
  • Hidron A I, Edwards J R, Patel J, et al. NHSN annual update: antimicrobial-resistant pathogens associated with health- care-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect Control Hosp Epidemiol 2008; 29:996-1011.
  • Patel G, Huprikar S, Factor S H, et al. Outcomes of carbape- nem-resistant Klebsiella pneumoniae infection and the im- pact of antimicrobial and adjunctive therapies. Infect Control Hosp Epidemiol 2008;29:1099-1106.
  • Gupta N, Limbago B M, Patel J B, et al. Carbapenem-resis- tant Enterobacteriaceae: epidemiology and prevention. Clin Infect Dis 2011;53:60-67.
  • Hirsch E B, Tam V H. Detection and treatment options for Klebsiella pneumoniae carbapenemases (KPCs): an emerg- ing cause of multidrug-resistant infection. J Antimicrob Che- mother 2010;65:1119-1125.
  • Balm M N, Ngan G, Jureen R, et al. Molecular characteriza- tion of newly emerged blaKPC-2-producing Klebsiella pneu- moniae in Singapore. J Clin Microbiol 2012;50:475-476.
  • Hu F, Chen S, Xu X, et al. Emergence of carbapenem-resis- tant clinical Enterobacteriaceae isolates from a teaching hos- pital in Shanghai, China. J Med Microbiol 2012;61:132-136.
  • Nordmann P, Poirel L, Carrer A, et al. How to detect NDM-1 producers. J Clin Microbiol 2011;49:718-721.
  • Cornaglia G, Giamarellou H, Rossolini G M. Metallo-beta- lactamases: a last frontier for beta-lactams? Lancet Infect Dis 2011;11:381-393.
  • Yan J J, Ko W C, Chuang C L, et al. Metallo-beta-lactamase- producing Enterobacteriaceae isolates in a university hospi- tal in Taiwan: prevalence of IMP-8 in Enterobacter cloacae and first identification of VIM-2 in Citrobacter freundii. J Anti- microb Chemother 2002;50:503-511.
  • Kumarasamy K K, Toleman M A, Walsh T R, et al. Emer- gence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemio- logical study. Lancet Infect Dis 2010;10:597-602.
  • Rolain J M, Parola P, Cornaglia G. New Delhi metallo-beta- lactamase (NDM-1): towards a new pandemia? Clin Micro- biol Infect 2010;16:1699-1701.
  • Doumith M, Ellington M J, Livermore D M, et al. Molecular mechanisms disrupting porin expression in ertapenem-resis- tant Klebsiella and Enterobacter spp. clinical isolates from the UK. J Antimicrob Chemother 2009;63:659-667.

Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital

Year 2014, Volume: 4 Issue: 04, 145 - 151, 01.12.2014
https://doi.org/10.5799/ahinjs.02.2014.04.0158

Abstract

ET Amaç: Bu çalışmada Çin’in Guangdong bölgesinde bulunan bir eğitim hastanesinde, Ocak 2008 ile Aralık 2011 tarihleri arasında dönemde izole edilen karbapenem dirençli Enterobacteriaceae (CRE), kökenlerinin moleküler özelliklerini incelemesi amaçlanmıştır.Yöntemler: Çalışma döneminde 3286 suştan toplam 28 (% 0,9) CRE izolatı ayrıştırıldı ve çalışmaya alındı. Antimikrobiyal duyarlılık testleri, Modifiye Hodge (MHT) testi ve genotip incelenmesinde Pulsed-field jel elektroforez kullanıldı. Genişletilmiş spektrumlu β-laktamaz (GSBL) ve karbapenemaz genlerinin varlığı, gen amplifikasyonu ve dizi analizi kullanılarak tespit edildi. Bakterilerin Dış zar porini (OMP) genleri (OmpK35 / OmpK36 K. pneumoniae, E. cloacae için OMPC / OmpF) incelendi.Bulgular: MHT ile 28 kökenin yedisi (% 25,0) dirençli Enterobacteriaceae olarak tanımlandı. PCR ve dizi analizi gibi moleküler yöntemlerle kökenlerden 15’inin (% 53,6) GSBL pozitif olduğu, altısının AmpC (% 21,4), beşinin IMP-4 (% 17,9) ve dokuzunun en az iki farklı sınıf dirence sahip olduğu görülmüştür. Özel olarak, yedi MHT pozitif kökenin beşinin (% 71,4) karbapenemaz kodlayan genlerinin IMP-4 üretimine bağlı iken PFGE analizinde bir K. pneumoniae dışında hemen hemen tüm CRE kökenlerinin, OMPC ve / veya ompF içinde OmpK35 ve / veya OmpK36 kaybı gen ifade kaybı gözlendi. PFGE analizi genomik değişkenlik gösterdi.Sonuç: Enterobacteriaceae karbapenem direnci bu organizmalarda gözlenen OMP’lerin kayb sonucu oluşan porin’e değişimi ve β-laktamazların kombine etkisi nedeniyle oluşmaktadır. CRE yayılımı ve enfeksiyonlar hem anlamlı acil halk sağlığı hedefleri haline gelmiştir önlemek için

References

  • Brink AJ, Feldman C, Grolman DC, et al. Appropriate use of the carbapenems. S Afr Med J 2004; 94:857-861.
  • Rhomberg P R, Jones R N. Summary trends for the Me- ropenem Yearly Susceptibility Test Information Collection Program: a 10-year experience in the United States (1999- 2008). Diagn Microbiol Infect Dis 2009; 65:414-426.
  • Hidron AI, Edwards JR, Patel J, et al. NHSN annual update: antimicrobial-resistant pathogens associated with health- care-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect Control Hosp Epidemiol 2008; 29:996-1011.
  • Livermore DM, Woodford N. The beta-lactamase threat in En- terobacteriaceae, Pseudomonas and Acinetobacter. Trends Microbiol 2006; 14:413-420.
  • Nordmann P, Naas T, Poirel L. Global spread of Carbapene- mase-producing Enterobacteriaceae. Emerg Infect Dis 2011; 17:1791-1798.
  • Doumith M, Ellington M J, Livermore D M, et al. Molecular mechanisms disrupting porin expression in ertapenem-resis- tant Klebsiella and Enterobacter spp. clinical isolates from the UK. J Antimicrob Chemother 2009; 63:659-667.
  • Kim S Y, Park Y J, Yu J K, et al. Prevalence and mechanisms of decreased susceptibility to carbapenems in Klebsiella pneu- moniae isolates. Diagn Microbiol Infect Dis 2007; 57:85-91.
  • Wang X D, Cai J C, Zhou H W, et al. Reduced susceptibility to carbapenems in Klebsiella pneumoniae clinical isolates associated with plasmid-mediated beta-lactamase produc- tion and OmpK36 porin deficiency. J Med Microbiol 2009; 58:1196-1202.
  • Cai J C, Zhou H W, Zhang R, et al. Emergence of Serratia marcescens, Klebsiella pneumoniae, and Escherichia coli Isolates possessing the plasmid-mediated carbapenem- hydrolyzing beta-lactamase KPC-2 in intensive care units of a Chinese hospital. Antimicrob Agents Chemother 2008; 52:2014-2018.
  • Yu F, Ying Q, Chen C, et al. Outbreak of pulmonary infec- tion caused by Klebsiella pneumoniae isolates harbouring blaIMP-4 and blaDHA-1 in a neonatal intensive care unit in China. J Med Microbiol 2012; 61:984-989.
  • Wei Z, Yu T, Qi Y, et al. Coexistence of plasmid-mediated KPC-2 and IMP-4 carbapenemases in isolates of Kleb- siella pneumoniae from China. J Antimicrob Chemother 2011;66:2670-2671.
  • Yan J J, Ko W C, Wu H M, et al. Complexity of Klebsiella pneumoniae isolates resistant to both cephamycins and extended-spectrum cephalosporins at a teaching hospital in Taiwan. J Clin Microbiol 2004;42:5337-5340.
  • Yigit H, Queenan A M, Anderson G J, et al. Novel carbape- nem-hydrolyzing beta-lactamase, KPC-1, from a carbape- nem-resistant strain of Klebsiella pneumoniae. Antimicrob Agents Chemother 2001;45:1151-1161.
  • Queenan A M, Bush K. Carbapenemases: the versatile beta- lactamases. Clin Microbiol Rev 2007; 20:440-458.
  • Poirel L, Benouda A, Hays C, et al. Emergence of NDM- 1-producing Klebsiella pneumoniae in Morocco. J Antimicrob Chemother 2011;66:2781-2783.
  • Dai W, Sun S, Yang P, et al. Characterization of carbapen- emases, extended spectrum beta-lactamases and molecular epidemiology of carbapenem-non-susceptible Enterobacter cloacae in a Chinese hospital in Chongqing]. Infect Genet Evol 2013; 14:1-7.
  • Hidron A I, Edwards J R, Patel J, et al. NHSN annual update: antimicrobial-resistant pathogens associated with health- care-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect Control Hosp Epidemiol 2008; 29:996-1011.
  • Patel G, Huprikar S, Factor S H, et al. Outcomes of carbape- nem-resistant Klebsiella pneumoniae infection and the im- pact of antimicrobial and adjunctive therapies. Infect Control Hosp Epidemiol 2008;29:1099-1106.
  • Gupta N, Limbago B M, Patel J B, et al. Carbapenem-resis- tant Enterobacteriaceae: epidemiology and prevention. Clin Infect Dis 2011;53:60-67.
  • Hirsch E B, Tam V H. Detection and treatment options for Klebsiella pneumoniae carbapenemases (KPCs): an emerg- ing cause of multidrug-resistant infection. J Antimicrob Che- mother 2010;65:1119-1125.
  • Balm M N, Ngan G, Jureen R, et al. Molecular characteriza- tion of newly emerged blaKPC-2-producing Klebsiella pneu- moniae in Singapore. J Clin Microbiol 2012;50:475-476.
  • Hu F, Chen S, Xu X, et al. Emergence of carbapenem-resis- tant clinical Enterobacteriaceae isolates from a teaching hos- pital in Shanghai, China. J Med Microbiol 2012;61:132-136.
  • Nordmann P, Poirel L, Carrer A, et al. How to detect NDM-1 producers. J Clin Microbiol 2011;49:718-721.
  • Cornaglia G, Giamarellou H, Rossolini G M. Metallo-beta- lactamases: a last frontier for beta-lactams? Lancet Infect Dis 2011;11:381-393.
  • Yan J J, Ko W C, Chuang C L, et al. Metallo-beta-lactamase- producing Enterobacteriaceae isolates in a university hospi- tal in Taiwan: prevalence of IMP-8 in Enterobacter cloacae and first identification of VIM-2 in Citrobacter freundii. J Anti- microb Chemother 2002;50:503-511.
  • Kumarasamy K K, Toleman M A, Walsh T R, et al. Emer- gence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemio- logical study. Lancet Infect Dis 2010;10:597-602.
  • Rolain J M, Parola P, Cornaglia G. New Delhi metallo-beta- lactamase (NDM-1): towards a new pandemia? Clin Micro- biol Infect 2010;16:1699-1701.
  • Doumith M, Ellington M J, Livermore D M, et al. Molecular mechanisms disrupting porin expression in ertapenem-resis- tant Klebsiella and Enterobacter spp. clinical isolates from the UK. J Antimicrob Chemother 2009;63:659-667.
There are 28 citations in total.

Details

Primary Language English
Journal Section ART
Authors

Kang Liao This is me

Yili Chen This is me

Han Huang This is me

Penghao Guo This is me

Dongmei Chen This is me

Min Liu This is me

Yan Zeng This is me

Publication Date December 1, 2014
Published in Issue Year 2014 Volume: 4 Issue: 04

Cite

APA Liao, K., Chen, Y., Huang, H., Guo, P., et al. (2014). Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital. Journal of Microbiology and Infectious Diseases, 4(04), 145-151. https://doi.org/10.5799/ahinjs.02.2014.04.0158
AMA Liao K, Chen Y, Huang H, Guo P, Chen D, Liu M, Zeng Y. Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital. J Microbil Infect Dis. December 2014;4(04):145-151. doi:10.5799/ahinjs.02.2014.04.0158
Chicago Liao, Kang, Yili Chen, Han Huang, Penghao Guo, Dongmei Chen, Min Liu, and Yan Zeng. “Molecular Characteristics of Carbapenem-Resistant Enterobacteriaceae Isolates from a Chinese Tertiary Hospital”. Journal of Microbiology and Infectious Diseases 4, no. 04 (December 2014): 145-51. https://doi.org/10.5799/ahinjs.02.2014.04.0158.
EndNote Liao K, Chen Y, Huang H, Guo P, Chen D, Liu M, Zeng Y (December 1, 2014) Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital. Journal of Microbiology and Infectious Diseases 4 04 145–151.
IEEE K. Liao, Y. Chen, H. Huang, P. Guo, D. Chen, M. Liu, and Y. Zeng, “Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital”, J Microbil Infect Dis, vol. 4, no. 04, pp. 145–151, 2014, doi: 10.5799/ahinjs.02.2014.04.0158.
ISNAD Liao, Kang et al. “Molecular Characteristics of Carbapenem-Resistant Enterobacteriaceae Isolates from a Chinese Tertiary Hospital”. Journal of Microbiology and Infectious Diseases 4/04 (December 2014), 145-151. https://doi.org/10.5799/ahinjs.02.2014.04.0158.
JAMA Liao K, Chen Y, Huang H, Guo P, Chen D, Liu M, Zeng Y. Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital. J Microbil Infect Dis. 2014;4:145–151.
MLA Liao, Kang et al. “Molecular Characteristics of Carbapenem-Resistant Enterobacteriaceae Isolates from a Chinese Tertiary Hospital”. Journal of Microbiology and Infectious Diseases, vol. 4, no. 04, 2014, pp. 145-51, doi:10.5799/ahinjs.02.2014.04.0158.
Vancouver Liao K, Chen Y, Huang H, Guo P, Chen D, Liu M, Zeng Y. Molecular characteristics of carbapenem-resistant Enterobacteriaceae isolates from a Chinese Tertiary Hospital. J Microbil Infect Dis. 2014;4(04):145-51.