Novel Carbazole–Formazan Derivatives: Synthesis, Spectroscopic Characterization, DFT Analysis, and Molecular Docking Studies
Abstract
In this study, three novel chloro-substituted carbazole–formazan derivatives were synthesized through a diazotization–coupling reaction starting from carbazole-based hydrazone intermediates. The structures of the obtained compounds were elucidated using FT-IR, ¹H NMR, ¹³C NMR, and HRMS spectroscopy (for the p-chloro derivative), all of which confirmed the successful formation of the azo–hydrazone tautomeric framework. FT-IR spectra exhibited characteristic N–H, C=N, N=N, and C–N stretching vibrations, while the NMR data clearly reflected the electronic environments of the carbazole scaffold and the substituted formazan moiety. To investigate the electronic and structural features of the synthesized regioisomers, Density Functional Theory (DFT) calculations were performed, including frontier molecular orbital (FMO) analysis, molecular electrostatic potential (MEP) mapping, and global reactivity descriptors. The results revealed that the position of the chloro substituent significantly influences orbital distributions, charge separation, and overall reactivity. The ortho isomer exhibited the lowest HOMO–LUMO energy gap and highest electrophilicity, indicating enhanced reactivity. In contrast, the para isomer displayed the greatest chemical hardness and π-delocalization, suggesting superior electronic stability. Molecular docking simulations were carried out against six clinically relevant microbial enzymes, including TEM-1 β-lactamase, AmpC β-lactamase, PBP2a, PBP5, CYP51B, and CYP51. All derivatives exhibited favorable binding energies, supported by diverse stabilizing interactions, including hydrogen bonding, π–π stacking, and hydrophobic contacts. Among them, the p-chloro derivative demonstrated the strongest binding affinities, consistent with its DFT-derived stability and electron distribution. Overall, the combined spectroscopic, computational, and molecular docking results highlight these carbazole–formazan derivatives as promising scaffolds with potential antimicrobial relevance. The findings provide a robust foundation for future biological evaluation and rational structural optimization.
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References
- 1. Alqaraghuli H, Y. Kadhim Z, Seewan A. Synthesis, characterization, theoretical study, antioxidant activity and in vitro cytotoxicity study of novel formazan derivatives toward MCF-7 cells. Egypt J Chem [Internet]. 2021 Dec 8;65(6):181–8. Available from:
. - 2. Lemieux P, Michaud M, Pagé M. A new formazan amplified clonogenic assay for cytotoxicity testing. Biotechnol Tech [Internet]. 1993 Aug;7(8):597–602. Available from:
. - 3. Alfaifi GH, Farghaly TA, Magda H. Abdellattif. Indenyl-thiazole and indenyl-formazan derivatives: Synthesis, anticancer screening studies, molecular-docking, and pharmacokinetic/ molin-spiration properties. Shaik AB, editor. PLoS One [Internet]. 2023 Mar 1;18(3):e0274459. Available from:
. - 4. Mouada H, Hachama K, Zafar I, Stiti MZ, Babar S, Khodja M. Antioxidant and antitumor potential of some benzoxazines against MCF‐7 cell lines using in vitro and in silico approaches. ChemistrySelect [Internet]. 2024 Sep 4;9(33):e202401869. Available from:
. - 5. Toy M, Vural H, Şenöz H. Synthesis, spectroscopic (FT-IR, 1 H NMR, and UV-Vis) and nonlinear optical properties of a novel 3-(p-Cyanophenyl)-5-(o, m, p-Iodophenyl)-1-phenylformazan: experimental and DFT studies. Polycycl Aromat Compd [Internet]. 2023 Sep 14;43(8):7279–96. Available from:
. - 6. Hong HS, Maezawa I, Yao N, Xu B, Diaz-Avalos R, Rana S, et al. Combining the rapid MTT formazan exocytosis assay and the MC65 protection assay led to the discovery of carbazole analogs as small molecule inhibitors of Aβ oligomer-induced cytotoxicity. Brain Res [Internet]. 2007 Jan;1130:223–34. Available from:
. - 7. Palatanchirakkal R, Chennikkad R, Kavitha AP, Farhan KM, Bijudas K, Andikkadankuzhiyil AR, et al. Synthesis, characterization, and biological evaluation of 3-benzoyl-1,5-di-(4-bromophenyl) formazan and its metal complexes: Structural insights and antibacterial activity. J Mol Liq [Internet]. 2025 Jun;428:127545. Available from:
. - 8. Khan SA, Rizwan K, Shahid S, Noamaan MA, Rasheed T, Amjad H. Synthesis, DFT, computational exploration of chemical reactivity, molecular docking studies of novel formazan metal complexes and their biological applications. Appl Organomet Chem [Internet]. 2020 Mar 7;34(3):e5444. Available from:
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Details
Primary Language
English
Subjects
Organic Chemical Synthesis
Journal Section
Research Article
Authors
Serkan Öncüoğlu
*
0000-0001-7900-5231
Türkiye
Publication Date
March 11, 2026
Submission Date
December 2, 2025
Acceptance Date
February 19, 2026
Published in Issue
Year 2026 Number: 2026-1
