Research Article
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Year 2024, Volume: 43 Issue: 2, 126 - 131, 31.12.2024
https://doi.org/10.30782/jrvm.1568041

Abstract

References

  • 1. Şekercioğlu ÇH, Anderson S, Akçay E, Bilgin R, Can ÖE, Semiz G, Tavşanoğlu Ç, Yokeş MB, Soyumert A, İpekdal K, Sağlam İK, Yücel M, Dalfesm HN. Turkey’s globally important biodiversity in crisis. Biological Conservation 2011;144(12):2752-2769.
  • 2. Gür H. Anadolu Diyagonali: Bir Biyocoğrafi Sınırın Anatomisi. Kebikec: Insan Bilimleri icin Kaynak Arastirmali Dergisi 2017; 43.
  • 3. Groves CP. The Taxonomy of Arabian Gazelles, In: Habibi K., Abuzinada AH. and Nader IA. (eds), The Gazelles of Arabia, National Commission for Wildlife Conservation and Development Publication 1997;29:2451.
  • 4. Groves CP, Grubb P. Ungulate taxonomy. Baltimore Md.: Johns Hopkins University Press. 2011.
  • 5. Lerp H, Wronski T, Plath M, Schröter A, Pfenninger M. Phylogenetic and population genetic analyses suggest a potential species boundary between Mountain (Gazella gazella) and Arabian Gazelles (G. arabica) in the Levant. Mammalian Biology 2013;78:383-386.
  • 6. Hemami MR, Khosravi R, Groves C, Ahmadi M. Morphological diversity and ecological niche divergence in goitered and sand gazelles. Ecology and Evolution 2020;10(20):11535-11548
  • 7. IUCN SSC Antelope Specialist Group. Gazella subgutturosa. The IUCN Red List of Threatened Species 2017;me.T8976A50187422. http://dx.doi.org/10.2305/IUCN.UK.2017 2.RLTS.T8976A50187422. en
  • 8. Orman A, Uztemur A. Ensuring the reproduction of gazelles, whose numbers are decreasing in Türkiye and whose habitats are confined to a narrow region, in new habitats Journal of Research in Veterinary Medicine 2022;41(2):127-132
  • 9. Uztemur A and Orman A. Correlation between body measurements of Gazella marica fawns after weaning and estimating body weight from these measurements. Kafkas Universitesi Veteriner Fakültesi Dergisi 2024a;30(4):611-618.
  • 10. Uztemur A and Orman A. Features of lying behavior of Gazella marica fawns in semicaptive conditions. Turkish Journal of Veterinary & Animal Sciences 2024b;48: 150-155.
  • 11. Mallon DP, Kingswood SC. Antelopes. Part 4: North Africa, the Middle East, and Asia. Global Survey and Regional Action Plans. SSC Antelope Specialist Group. IUCN, Gland, Switzerland and Cambridge, UK. 2001.
  • 12. Wacher T, Wronski T, Hammond RL, Winney B, Blacket MJ, Hundertmark JK, Mohammed OB, Omer SA, Macasero, W, Lerp H, Plath M, Bleidorn C. Phylogenetic analysis of mitochondrial DNA sequences reveals polyphyly in the goitred gazelle (Gazella subgutturosa). Conservation Genetics 2011;12:827-831
  • 13. Saatoglu FD, Oncu MD, Emir H, Hatipoglu T, Acan SC, Kankilic T, Togan İ, Koban BE. Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey. European Journal of Biology 2019;78(2):89-103.
  • 14. Kankilic T, Ozut D, Gurler S, Kence M, Bozkaya F. Kence A. Rediscovery of a new mountain gazelle population and clarification of taxonomic status of the genus Gazella in Turkey using mtDNA sequencing, Folia Zoologica. 2012;61:129-137.
  • 15. Murtskhvaladze M, Gurielidze Z., Kopaliani N, & Tarkhnishvili D. Gene introgression between Gazella subgutturosa and G. marica: limitations of maternal inheritance analysis for species identification with conservation purposes. Acta Theriologica, 2012;57(4):383-386.
  • 16. Turan N. Ceylan (Gazella subgutturosa) Neslinin Korunması ve Geliştirilmesine Dair Rapor. Ankara, Turkey: T.C. Orman ve Su İşleri Bakanlığı Doğa Koruma ve Milli Parklar Genel Müdürlüğü Arşivi (in Turkish). 1977.
  • 17. Demirsoy A. Türkiye Omurgalıları Memeliler. 2nd ed. Ankara, Turkey: Meteksan A.Ş. 2003.
  • 18. Gürler Ş, Kence M, Bozkaya, F, Kankılıç T, Özüt D, Çobanoğlu A.E, Durmuş M. Doğaya Salınan Ceylanların (Gazella subgutturosa) Uyum Sürecinin Mikrosatelit Analizi ile Genetik, Radyo Telemetri ve GPS Telemetrisi ile Ekolojik Yönlerden Değerlendirilmesi. TUBITAK 107T175 Sonuç Raporu. 2010.
  • 19. Bozkaya F and Gürler S. Sequence diversity of MHC class-II DRB gene in gazelles (Gazella subgutturosa) raised in Sanliurfa of Turkey. Journal of Genetics. 2018;97:897-903.
  • 20. Gürler Ş, Bozkaya F, Özüt D, Durmuş M. Some morphological characteristics and neonatal weights of reintroduced gazelle (Gazella subgutturosa) in Turkey. Turkish Journal of Zoology 2015;39(3):458-466.
  • 21. Yilmaz B, Demircioglu İ, Bozkaya F, Ince N. 2020. Three-dimensional tomographic reconstruction and morphometric analysis of skull in gazelles (Gazella subgutturosa). Ankara Üniversitesi Veteriner Fakültesi Dergisi, 2020;67:161-168.
  • 22. FAO-TOB. Şanlıurfa Bozkır Koruma Strateji ve Eylem Planı. Türkiye’nin Bozkır Ekosistemlerinin Korunması ve Sürdürülebilir Yönetimi Projesi Yayını. Ankara, Türkiye. Doğa Koruma Merkezi, 2020; 177 sayfa. (in Turkish).
  • 23. Sorokin PA, Soldatov NV, Lukarevskiya VS, Kholodova MV. Genetic Diversity and Relations of the Goitered Gazelle (Gazella subgutturosa) Groups from Uzbekistan, Turkmenistan, and Azerbaijan: Analysis of the DLoop of Mitochondrial DNA. Biology Bulletin 2011;38(6):585-590.
  • 24. Fadakar D, Rezaei HR, Naseri M, Mirzakhah M, Naderi S, Zamani, W. Phylogenetic analysis of Persian Gazella, Gazella subgutturosa (Artiodactyla: Bovidae) based on cytochrome b in central Iran. Molecular Biology 2013;2(4):151- 159.
  • 25. Abduriyim S, Nabi A, Halik M. Low genetic diversity in the goitered gazelle Gazella subgutturosa (Güldenstädt, 1780; Artiodactyla: Bovidae) in North-western China as revealed by the mitochondrial cytochrome b gene. Acta Zoologica Bulgarica 2018;70(2):211- 218.
  • 26. Kocher, TD., Thomas, WK, Meyer, A, Edwards, SV, Pääbo, S, Villablanca, FX, & Wilson, AC. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences, 1989;86(16):6196-6200.
  • 27. Irwin, DM, Kocher, TD, & Wilson, AC. Evolution of the cytochrome b gene of mammals. Journal of molecular evolution, 1991;32:128-144.
  • 28. Lerp, H., Wronski, T., Pfenninger, M., & Plath, M. A phylogeographic framework for the conservation of Saharan and Arabian Dorcas gazelles (Artiodactyla: Bovidae). Organisms Diversity & Evolution, 2011;11: 317-329.
  • 29. Saitou N, Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 1987;4:406-425.
  • 30. Tamura K, Nei M, Kumar S. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences (USA) 2004;101:11030-11035.
  • 31. Kumar S, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution 2018;35:1547-1549.
  • 32. Lsmayil, Z, Muhtar S, Ababaikeri B, Satar A, Eli S, Halik M. Influence of environmental factors on genetic diversity of Gazella subgotturosa in Xinjiang, China. Acta Theriologica Sinica 2019;39:276-284
  • 33. Abbas G, Nadeem A, Javed M, Ali MM, Aqeel M, Babar ME, Tahir MS, Tabassum S, Shehzad W. Mitochondrial cytochrome-b, cytochrome-c and d-loop region based phylogenetic and diversity analysis in blackbuck (Antilope cervicapra). Kafkas Universitesi Veteriner Fakültesi Dergisi 2020;26 (1):25-31.
  • 34. Granjon L, Vassart M, Greth A, Cribiu EP. Genetic study of sand gazelles (Gazella subgutturosa marica) from Saudi Arabia. Zeitschrift für Säugetierkunde 1991;56:169-176.
  • 35. Schreiber A, Hegel GV. Genetic variability in goitred gazelle Gazella subgutturosa subgutturosa: allozymes and karyotypes. Acta Theriologica 1999;44:55–66
  • 36. Zachos FE, Karami M, Ibenouazi Z, Hartl GB, Eckert I, Kirschning J. First genetic analysis of a free-living population of the threatened goitered gazelle (Gazella subgutturosa) Mammalian Biology 2010;75:277-282.

Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province

Year 2024, Volume: 43 Issue: 2, 126 - 131, 31.12.2024
https://doi.org/10.30782/jrvm.1568041

Abstract

Gazelles are one of the important species unique to Türkiye, as in most Asian and Middle Eastern countries. Gazelles in Türkiye belong to the Gazella subgutturosa species, which has two subspecies: Şanlıurfa gazelle (Gazella marica) and Hatay Mountain gazelle (Gazella gazella). Numbers of Şanlıurfa gazelle (Gazella marica) are decreasing in Türkiye as well as all over the world, and today they are found in a limited area on the southern border, mostly around the province of Şanlıurfa. The aim of this study is to examine the 400 bp region of the mitochondrial cytochrome-b (mtDNA cyt-b) gene, which is frequently used in phylogenetic studies in gazelles, by sequence analysis. Samples were taken from a total of 40 male and female gazelles from populations in four different holdings in Şanlıurfa province. Sequence analysis results did not reveal any nucleotide diversity in terms of the examined region. the samples examined in after constructed phylogenetic tree which was evaluated together with the sequences covering the same region in the database of the obtained sequence analysis result showed that the samples exanimated were clustered together with Gazella marica samples, in line with previous studies.

Ethical Statement

Harran University Animal Experiments Local Ethics Committee Presidency with decision number 2023/07/20 and ethics committee permission dated 12/09/2023 and numbered 244460. The authors of this research declare that there are no conflicts of interest.

Supporting Institution

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Thanks

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References

  • 1. Şekercioğlu ÇH, Anderson S, Akçay E, Bilgin R, Can ÖE, Semiz G, Tavşanoğlu Ç, Yokeş MB, Soyumert A, İpekdal K, Sağlam İK, Yücel M, Dalfesm HN. Turkey’s globally important biodiversity in crisis. Biological Conservation 2011;144(12):2752-2769.
  • 2. Gür H. Anadolu Diyagonali: Bir Biyocoğrafi Sınırın Anatomisi. Kebikec: Insan Bilimleri icin Kaynak Arastirmali Dergisi 2017; 43.
  • 3. Groves CP. The Taxonomy of Arabian Gazelles, In: Habibi K., Abuzinada AH. and Nader IA. (eds), The Gazelles of Arabia, National Commission for Wildlife Conservation and Development Publication 1997;29:2451.
  • 4. Groves CP, Grubb P. Ungulate taxonomy. Baltimore Md.: Johns Hopkins University Press. 2011.
  • 5. Lerp H, Wronski T, Plath M, Schröter A, Pfenninger M. Phylogenetic and population genetic analyses suggest a potential species boundary between Mountain (Gazella gazella) and Arabian Gazelles (G. arabica) in the Levant. Mammalian Biology 2013;78:383-386.
  • 6. Hemami MR, Khosravi R, Groves C, Ahmadi M. Morphological diversity and ecological niche divergence in goitered and sand gazelles. Ecology and Evolution 2020;10(20):11535-11548
  • 7. IUCN SSC Antelope Specialist Group. Gazella subgutturosa. The IUCN Red List of Threatened Species 2017;me.T8976A50187422. http://dx.doi.org/10.2305/IUCN.UK.2017 2.RLTS.T8976A50187422. en
  • 8. Orman A, Uztemur A. Ensuring the reproduction of gazelles, whose numbers are decreasing in Türkiye and whose habitats are confined to a narrow region, in new habitats Journal of Research in Veterinary Medicine 2022;41(2):127-132
  • 9. Uztemur A and Orman A. Correlation between body measurements of Gazella marica fawns after weaning and estimating body weight from these measurements. Kafkas Universitesi Veteriner Fakültesi Dergisi 2024a;30(4):611-618.
  • 10. Uztemur A and Orman A. Features of lying behavior of Gazella marica fawns in semicaptive conditions. Turkish Journal of Veterinary & Animal Sciences 2024b;48: 150-155.
  • 11. Mallon DP, Kingswood SC. Antelopes. Part 4: North Africa, the Middle East, and Asia. Global Survey and Regional Action Plans. SSC Antelope Specialist Group. IUCN, Gland, Switzerland and Cambridge, UK. 2001.
  • 12. Wacher T, Wronski T, Hammond RL, Winney B, Blacket MJ, Hundertmark JK, Mohammed OB, Omer SA, Macasero, W, Lerp H, Plath M, Bleidorn C. Phylogenetic analysis of mitochondrial DNA sequences reveals polyphyly in the goitred gazelle (Gazella subgutturosa). Conservation Genetics 2011;12:827-831
  • 13. Saatoglu FD, Oncu MD, Emir H, Hatipoglu T, Acan SC, Kankilic T, Togan İ, Koban BE. Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey. European Journal of Biology 2019;78(2):89-103.
  • 14. Kankilic T, Ozut D, Gurler S, Kence M, Bozkaya F. Kence A. Rediscovery of a new mountain gazelle population and clarification of taxonomic status of the genus Gazella in Turkey using mtDNA sequencing, Folia Zoologica. 2012;61:129-137.
  • 15. Murtskhvaladze M, Gurielidze Z., Kopaliani N, & Tarkhnishvili D. Gene introgression between Gazella subgutturosa and G. marica: limitations of maternal inheritance analysis for species identification with conservation purposes. Acta Theriologica, 2012;57(4):383-386.
  • 16. Turan N. Ceylan (Gazella subgutturosa) Neslinin Korunması ve Geliştirilmesine Dair Rapor. Ankara, Turkey: T.C. Orman ve Su İşleri Bakanlığı Doğa Koruma ve Milli Parklar Genel Müdürlüğü Arşivi (in Turkish). 1977.
  • 17. Demirsoy A. Türkiye Omurgalıları Memeliler. 2nd ed. Ankara, Turkey: Meteksan A.Ş. 2003.
  • 18. Gürler Ş, Kence M, Bozkaya, F, Kankılıç T, Özüt D, Çobanoğlu A.E, Durmuş M. Doğaya Salınan Ceylanların (Gazella subgutturosa) Uyum Sürecinin Mikrosatelit Analizi ile Genetik, Radyo Telemetri ve GPS Telemetrisi ile Ekolojik Yönlerden Değerlendirilmesi. TUBITAK 107T175 Sonuç Raporu. 2010.
  • 19. Bozkaya F and Gürler S. Sequence diversity of MHC class-II DRB gene in gazelles (Gazella subgutturosa) raised in Sanliurfa of Turkey. Journal of Genetics. 2018;97:897-903.
  • 20. Gürler Ş, Bozkaya F, Özüt D, Durmuş M. Some morphological characteristics and neonatal weights of reintroduced gazelle (Gazella subgutturosa) in Turkey. Turkish Journal of Zoology 2015;39(3):458-466.
  • 21. Yilmaz B, Demircioglu İ, Bozkaya F, Ince N. 2020. Three-dimensional tomographic reconstruction and morphometric analysis of skull in gazelles (Gazella subgutturosa). Ankara Üniversitesi Veteriner Fakültesi Dergisi, 2020;67:161-168.
  • 22. FAO-TOB. Şanlıurfa Bozkır Koruma Strateji ve Eylem Planı. Türkiye’nin Bozkır Ekosistemlerinin Korunması ve Sürdürülebilir Yönetimi Projesi Yayını. Ankara, Türkiye. Doğa Koruma Merkezi, 2020; 177 sayfa. (in Turkish).
  • 23. Sorokin PA, Soldatov NV, Lukarevskiya VS, Kholodova MV. Genetic Diversity and Relations of the Goitered Gazelle (Gazella subgutturosa) Groups from Uzbekistan, Turkmenistan, and Azerbaijan: Analysis of the DLoop of Mitochondrial DNA. Biology Bulletin 2011;38(6):585-590.
  • 24. Fadakar D, Rezaei HR, Naseri M, Mirzakhah M, Naderi S, Zamani, W. Phylogenetic analysis of Persian Gazella, Gazella subgutturosa (Artiodactyla: Bovidae) based on cytochrome b in central Iran. Molecular Biology 2013;2(4):151- 159.
  • 25. Abduriyim S, Nabi A, Halik M. Low genetic diversity in the goitered gazelle Gazella subgutturosa (Güldenstädt, 1780; Artiodactyla: Bovidae) in North-western China as revealed by the mitochondrial cytochrome b gene. Acta Zoologica Bulgarica 2018;70(2):211- 218.
  • 26. Kocher, TD., Thomas, WK, Meyer, A, Edwards, SV, Pääbo, S, Villablanca, FX, & Wilson, AC. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences, 1989;86(16):6196-6200.
  • 27. Irwin, DM, Kocher, TD, & Wilson, AC. Evolution of the cytochrome b gene of mammals. Journal of molecular evolution, 1991;32:128-144.
  • 28. Lerp, H., Wronski, T., Pfenninger, M., & Plath, M. A phylogeographic framework for the conservation of Saharan and Arabian Dorcas gazelles (Artiodactyla: Bovidae). Organisms Diversity & Evolution, 2011;11: 317-329.
  • 29. Saitou N, Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 1987;4:406-425.
  • 30. Tamura K, Nei M, Kumar S. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences (USA) 2004;101:11030-11035.
  • 31. Kumar S, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution 2018;35:1547-1549.
  • 32. Lsmayil, Z, Muhtar S, Ababaikeri B, Satar A, Eli S, Halik M. Influence of environmental factors on genetic diversity of Gazella subgotturosa in Xinjiang, China. Acta Theriologica Sinica 2019;39:276-284
  • 33. Abbas G, Nadeem A, Javed M, Ali MM, Aqeel M, Babar ME, Tahir MS, Tabassum S, Shehzad W. Mitochondrial cytochrome-b, cytochrome-c and d-loop region based phylogenetic and diversity analysis in blackbuck (Antilope cervicapra). Kafkas Universitesi Veteriner Fakültesi Dergisi 2020;26 (1):25-31.
  • 34. Granjon L, Vassart M, Greth A, Cribiu EP. Genetic study of sand gazelles (Gazella subgutturosa marica) from Saudi Arabia. Zeitschrift für Säugetierkunde 1991;56:169-176.
  • 35. Schreiber A, Hegel GV. Genetic variability in goitred gazelle Gazella subgutturosa subgutturosa: allozymes and karyotypes. Acta Theriologica 1999;44:55–66
  • 36. Zachos FE, Karami M, Ibenouazi Z, Hartl GB, Eckert I, Kirschning J. First genetic analysis of a free-living population of the threatened goitered gazelle (Gazella subgutturosa) Mammalian Biology 2010;75:277-282.
There are 36 citations in total.

Details

Primary Language English
Subjects Veterinary Sciences (Other)
Journal Section Research Articles
Authors

Adil Uztemur 0000-0003-4866-2663

Abdülkadir Orman 0000-0001-9138-4422

Onur Yılmaz 0000-0002-5658-8558

Nezih Ata 0000-0002-0387-5131

Zühal Gündüz 0000-0002-1427-1501

Yasemin Öner 0000-0002-2904-8986

Publication Date December 31, 2024
Submission Date October 15, 2024
Acceptance Date December 3, 2024
Published in Issue Year 2024 Volume: 43 Issue: 2

Cite

APA Uztemur, A., Orman, A., Yılmaz, O., Ata, N., et al. (2024). Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province. Journal of Research in Veterinary Medicine, 43(2), 126-131. https://doi.org/10.30782/jrvm.1568041
AMA Uztemur A, Orman A, Yılmaz O, Ata N, Gündüz Z, Öner Y. Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province. J Res Vet Med. December 2024;43(2):126-131. doi:10.30782/jrvm.1568041
Chicago Uztemur, Adil, Abdülkadir Orman, Onur Yılmaz, Nezih Ata, Zühal Gündüz, and Yasemin Öner. “Partial Characterization of the Mitochondrial DNA (mtDNA) in Gazelles (Gazella Marica) in Şanlıurfa Province”. Journal of Research in Veterinary Medicine 43, no. 2 (December 2024): 126-31. https://doi.org/10.30782/jrvm.1568041.
EndNote Uztemur A, Orman A, Yılmaz O, Ata N, Gündüz Z, Öner Y (December 1, 2024) Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province. Journal of Research in Veterinary Medicine 43 2 126–131.
IEEE A. Uztemur, A. Orman, O. Yılmaz, N. Ata, Z. Gündüz, and Y. Öner, “Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province”, J Res Vet Med, vol. 43, no. 2, pp. 126–131, 2024, doi: 10.30782/jrvm.1568041.
ISNAD Uztemur, Adil et al. “Partial Characterization of the Mitochondrial DNA (mtDNA) in Gazelles (Gazella Marica) in Şanlıurfa Province”. Journal of Research in Veterinary Medicine 43/2 (December 2024), 126-131. https://doi.org/10.30782/jrvm.1568041.
JAMA Uztemur A, Orman A, Yılmaz O, Ata N, Gündüz Z, Öner Y. Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province. J Res Vet Med. 2024;43:126–131.
MLA Uztemur, Adil et al. “Partial Characterization of the Mitochondrial DNA (mtDNA) in Gazelles (Gazella Marica) in Şanlıurfa Province”. Journal of Research in Veterinary Medicine, vol. 43, no. 2, 2024, pp. 126-31, doi:10.30782/jrvm.1568041.
Vancouver Uztemur A, Orman A, Yılmaz O, Ata N, Gündüz Z, Öner Y. Partial characterization of the mitochondrial DNA (mtDNA) in Gazelles (Gazella marica) in Şanlıurfa Province. J Res Vet Med. 2024;43(2):126-31.