Morphologic and Molecular Diagnosis of Some Leucoagaricus Species and Revealing a New Record from Turkey
Year 2019,
Volume: 10 Issue: 2, 143 - 150, 30.10.2019
Ayten Dizkırıcı
,
Ayşenur Kalmer
,
İsmail Acar
Abstract
Members of the genus Leucoagaricus (Agaricaceae) grow in the temperate climatic zone of the world.
Only 10 species have been identified up to now in Turkey even though 238 Leucoagaricus species are listed in
Mycobank database. In this study, the taxonomic positions of four species, Leucoagaricus subvolvatus, L. barssii, L.
subcretaceus and L. leucothites,
are discussed by evaluating morphological and molecular evidences and L. subvolvatus is
approved as a new record for
Turkey mycobiota. Internal transcribed spacer region (ITS) of each
studied species is sequenced to resolve phylogenetic relationship and microscopic and macroscopic features of new record are
described in detail.
Supporting Institution
Yüzüncü Yıl Üniversitesi Bilimsel Araştırma Projeleri Koordinasyon Birimi
Project Number
FHD-2018-6858
Thanks
This study was financially supported by Van Yuzuncu Yil University (Scientific Research Project Foundation, FHD-2018-6858), Van, Turkey.
References
- Bas, C., Kuyper, Th. W., Noordeloos, M. E. & Vellinga, E.C. (1999). Flora Agaricina Neerlandica. 4th ed. CRC Press. Rotterdam, Netherlands.
- Breitenbach, J., Kränzlin, F. (1991). Fungi of Switzerland. Verlag Mykologia. 3rd ed. Lucerne, Switzerland.
- Bon, M. (1981). Clé monographique des Lépiotes d'Europe (Agaricaceae, Tribus Lepioteae et Leucocoprineae), Documents Mycologiques, 11:43.
- Candusso M, Lanzoni G. (1990). Fungi Europaei 4. Lepiota s.l. Saronno, Italy: Giovanna Biella. 743 p.
- Desjardin, D.E., Wood, M.G. & Stevens, F.A. (2015). California Mushrooms: The Comprehensive Identification Guide. Timber Press: Portland, OR. 560 p.
- Doyle, J.J., Doyle, J.L. (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin, 19,11-15.
- Ge, Z.W., Yang, Z.L., Qasim, T., Nawaz, R., Khalid A.N., Vellinga, E.C. (2015). Four new species in Leucoagaricus (Agaricaceae, Basidiomycota) from Asia. Mycologia, 107:5, 1033-1044.
- Johnson J. (1999) Phylogenetic relationships within Lepiota sensu lato based on morphological and molecular data. Mycologia, 91: 443–458.
- Johnson J., Vilgalys R. (1998) Phylogenetic systematics of Lepiota sensu lato based on nuclear large subunit rDNA evidence. Mycologia, 90: 971–979.
- Hussain, S., Jabeen, S., Khalidd, A.N., Ahmade, H., Afshan, N., Sherg, H., Pfister, D.H. (2018). Underexplored regions of Pakistan yield five new species of Leucoagaricus. Mycologia, 110: 2, 387–400.
- Kumar, T. K. A., Manimohan, P. (2009). The genera Leucoagaricus and Leucocoprinus (Agaricales, Basidiomycota) in Kerala State, India. Mycotaxon,108: 385–428.
- Muñoz, G., Caballero, A., Contu, M., Ercole, E., Vizzini, A. (2014). Leucoagaricus croceobasis (Agaricales, Agaricaceae), a new species of section Piloselli from Spain. Mycol Progress, 13:649–655.
- Reid, D.A., Eicker, A. (1993). South African fungi. 2. Some species of Leucoagaricus and Leucocoprinus, South African Journal of Botany, 59(1): 85 – 97.
- Sesli, E., Denchev, C.M. (2014). Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey. 6th edn. Mycotaxon Checklists Online. (http://www.mycotaxon.com/resources/checklists/sesli-v106-checklist.pdf): 1-136.
- Singer, R. (1986). The Agaricales in modern taxonomy, 4th edn. Koeltz Scientific Books, Koenigstein.
- Tamura, K., Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees, Molecular Biology and Evolution, 10: 512-526.
- Tamura, K., Stecher, G., Peterson, D., Filipski, A., M., Kumar, S. (2013). MEGA 6: Molecular Evolutionary Genetics Analysis Version 6.0., Molecular Biology Evolution, 30(12), 2725–2729.
- Vellinga, E.C. (2000). Notes on Lepiota and Leucoagaricus. Type studies on Lepiota magnispora, Lepiota barssii and Leucogaricus americanus. Mycotaxon 76:429–438.
- Vellinga, E.C. (2001). Noordeloos, M.E., Kuyper, Th.W. & Vellinga, E.C. (eds). Flora agaricina neerlandica 5: 85–108. A.A. Balkema Publishers Lisse/Abingdon/Exton (PA)/Tokyo. 169 pp.
- Vellinga, E.C., de Kok, R.P.J. & Bruns, T.D. (2003) Phylogeny and taxonomy of Macrolepiota (Agaricaceae). Mycologia, 95 (3): 442–456.
- Vellinga, E.C. (2004). Ecology and distribution of lepiotaceous Fungi (Agaricaceae), Nova Hedwigia, 78: 273–299.
- Vellinga E.C., Davis R.M. (2006) Lepiotaceous fungi in California, U.S.A. –1. Leucoagaricus amanitoides sp. nov. Mycotaxon, 98: 197–204.
- Wen, J., Zimmer, E.A. (1996). Phylogeny and Biogeography of Panax L. (the Ginseng Genus, Araliaceae): Inferences from ITS Sequences of Nuclear Ribosomal DNA. Molecular Phylogenetics and Evolution, 6, 167–177.
Türkiye’de Bulunan Bazı Leucoagaricus Türlerinin Morfolojik ve Moleküler Teşhisleri ve Yeni Bir Kaydın Ortaya Çıkarılması
Year 2019,
Volume: 10 Issue: 2, 143 - 150, 30.10.2019
Ayten Dizkırıcı
,
Ayşenur Kalmer
,
İsmail Acar
Abstract
Leucoagaricus (Agaricaceae)
cinsinin üyeleri, dünyanın ılıman iklim bölgesinde yetişirler. Mycobank veri tabanında
238 Leucoagaricus türü listelenmesine rağmen, Türkiye'de şu ana kadar
sadece 10 tür belirlenmiştir. Bu çalışmada cinse ait dört türün (Leucoagaricus
subvolvatus, L. barssii, L. subcretaceus ve L. leucothites)
taksonomik konumları, morfolojik ve moleküler kanıtlar değerlendirilerek
tartışılmış ve L. subvolvatus Türkiye mikobiyotası için yeni bir kayıt
olarak tanımlanmıştır. Her çalışılan türün iç Internal
transcribed spacer bölgesi (ITS) filogenetik ilişkileri çözmek için dizilenmiş ve
yeni kayıt türün mikroskobik ve makroskobik özellikleri ayrıntılı olarak
açıklanmıştır.
Project Number
FHD-2018-6858
References
- Bas, C., Kuyper, Th. W., Noordeloos, M. E. & Vellinga, E.C. (1999). Flora Agaricina Neerlandica. 4th ed. CRC Press. Rotterdam, Netherlands.
- Breitenbach, J., Kränzlin, F. (1991). Fungi of Switzerland. Verlag Mykologia. 3rd ed. Lucerne, Switzerland.
- Bon, M. (1981). Clé monographique des Lépiotes d'Europe (Agaricaceae, Tribus Lepioteae et Leucocoprineae), Documents Mycologiques, 11:43.
- Candusso M, Lanzoni G. (1990). Fungi Europaei 4. Lepiota s.l. Saronno, Italy: Giovanna Biella. 743 p.
- Desjardin, D.E., Wood, M.G. & Stevens, F.A. (2015). California Mushrooms: The Comprehensive Identification Guide. Timber Press: Portland, OR. 560 p.
- Doyle, J.J., Doyle, J.L. (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin, 19,11-15.
- Ge, Z.W., Yang, Z.L., Qasim, T., Nawaz, R., Khalid A.N., Vellinga, E.C. (2015). Four new species in Leucoagaricus (Agaricaceae, Basidiomycota) from Asia. Mycologia, 107:5, 1033-1044.
- Johnson J. (1999) Phylogenetic relationships within Lepiota sensu lato based on morphological and molecular data. Mycologia, 91: 443–458.
- Johnson J., Vilgalys R. (1998) Phylogenetic systematics of Lepiota sensu lato based on nuclear large subunit rDNA evidence. Mycologia, 90: 971–979.
- Hussain, S., Jabeen, S., Khalidd, A.N., Ahmade, H., Afshan, N., Sherg, H., Pfister, D.H. (2018). Underexplored regions of Pakistan yield five new species of Leucoagaricus. Mycologia, 110: 2, 387–400.
- Kumar, T. K. A., Manimohan, P. (2009). The genera Leucoagaricus and Leucocoprinus (Agaricales, Basidiomycota) in Kerala State, India. Mycotaxon,108: 385–428.
- Muñoz, G., Caballero, A., Contu, M., Ercole, E., Vizzini, A. (2014). Leucoagaricus croceobasis (Agaricales, Agaricaceae), a new species of section Piloselli from Spain. Mycol Progress, 13:649–655.
- Reid, D.A., Eicker, A. (1993). South African fungi. 2. Some species of Leucoagaricus and Leucocoprinus, South African Journal of Botany, 59(1): 85 – 97.
- Sesli, E., Denchev, C.M. (2014). Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey. 6th edn. Mycotaxon Checklists Online. (http://www.mycotaxon.com/resources/checklists/sesli-v106-checklist.pdf): 1-136.
- Singer, R. (1986). The Agaricales in modern taxonomy, 4th edn. Koeltz Scientific Books, Koenigstein.
- Tamura, K., Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees, Molecular Biology and Evolution, 10: 512-526.
- Tamura, K., Stecher, G., Peterson, D., Filipski, A., M., Kumar, S. (2013). MEGA 6: Molecular Evolutionary Genetics Analysis Version 6.0., Molecular Biology Evolution, 30(12), 2725–2729.
- Vellinga, E.C. (2000). Notes on Lepiota and Leucoagaricus. Type studies on Lepiota magnispora, Lepiota barssii and Leucogaricus americanus. Mycotaxon 76:429–438.
- Vellinga, E.C. (2001). Noordeloos, M.E., Kuyper, Th.W. & Vellinga, E.C. (eds). Flora agaricina neerlandica 5: 85–108. A.A. Balkema Publishers Lisse/Abingdon/Exton (PA)/Tokyo. 169 pp.
- Vellinga, E.C., de Kok, R.P.J. & Bruns, T.D. (2003) Phylogeny and taxonomy of Macrolepiota (Agaricaceae). Mycologia, 95 (3): 442–456.
- Vellinga, E.C. (2004). Ecology and distribution of lepiotaceous Fungi (Agaricaceae), Nova Hedwigia, 78: 273–299.
- Vellinga E.C., Davis R.M. (2006) Lepiotaceous fungi in California, U.S.A. –1. Leucoagaricus amanitoides sp. nov. Mycotaxon, 98: 197–204.
- Wen, J., Zimmer, E.A. (1996). Phylogeny and Biogeography of Panax L. (the Ginseng Genus, Araliaceae): Inferences from ITS Sequences of Nuclear Ribosomal DNA. Molecular Phylogenetics and Evolution, 6, 167–177.