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First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey

Year 2020, , 23 - 31, 30.06.2020
https://doi.org/10.33714/masteb.668529

Abstract

The Pacific oyster (Crassostrea
gigas
) has a very important economic potential for aquaculture, but on the
other hand, is among the highly invasive species in the world and within the
Mediterranean ecosystem. In the 1960s,
C. gigas was brought to Europe
for aquaculture in the Mediterranean and Black Sea regions from Japan and
Canada. The Turkish waters are the part of the Mediterranean Sea, which is the
world’s most invaded sea. The invasion of alien species results from marine
transportation and aquaculture activities of non-native species. A heavy
maritime traffic is also present in the Marmara Sea, which connects the Black
Sea and Mediterranean Sea. The identification of the invasive species and their
distributions is very prominent in terms of protecting natural habitat and
monitoring the effects of invasive species. In this study, 30 individuals,
morphologically identified as
C. gigas, were collected from Bandırma
bay. The genomic DNAs were extracted from each sample’s muscle tissue using
universal salt extraction method. Partial sequences of COI and 16S
Mitochondrial DNA loci of the sample DNAs were obtained for species
identification. The sequences were searched against the database and results
were retrieved from BLAST. All the sequences obtained in this study showed
significant similarity with the
C. gigas sequences present in the
database (E=0). The sample sequences resulted in 9 different haplotypes for the
COI locus (hd: 0.5296 and variance: 0.01256±0.112) and 5 different haplotypes
for the 16S rDNA locus (hd: 0.2529, Variance: 0.01076±0.104). The results of
this study provided the first molecular evidence for the presence of non-native
Pacific oyster individuals in the Marmara Sea.

Supporting Institution

This work was supported by the Scientific Research Projects Coordination Unit of Çanakkale Onsekiz Mart University (Project No: FBA 2014-331, granted to Sefa Acarlı).

Project Number

FBA 2014-331

Thanks

This work was supported by the Scientific Research Projects Coordination Unit of Çanakkale Onsekiz Mart University (Project No: FBA 2014-331, granted to Sefa Acarlı).

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Year 2020, , 23 - 31, 30.06.2020
https://doi.org/10.33714/masteb.668529

Abstract

Project Number

FBA 2014-331

References

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  • Albayrak, S. (2011). Alien marine bivalve species reported from Turkish seas. Cahiers de Biologie Marine, 52: 107–118.
  • Aljanabi, S. M. & Martinez, I. (1997). Universal and rapid salt-extraction of high-quality genomic DNA for PCR- based techniques. Nucleic Acids Research, 25(22): 4692-4693.
  • Angles d’Auriac, M. B., Rinde, E., Norling, P., Lapègue, S., Staalstrøm, A., Hjermann, D. Ø. & Thaulow, J. (2017). Rapid expansion of the invasive oyster Crassostrea gigas at its northern distribution limit in Europe: Naturally dispersed or introduced? PLoS ONE, 12(5): e0177481. https://doi.org/10.1371/journal.pone.0177481
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  • Crocetta, F., Mariottini, P., Salvi, D. & Oliverio, M. (2015). Does GenBank provide a reliable DNA barcode reference to identify small alien oysters invading the Mediterranean Sea? Journal of the Marine Biological Association of the United Kingdom, 95(1): 111–122. https://doi.org/10.1017/S0025315414001027
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  • Çevik, C., Ozturk, B. & Buzzuro, G. (2001). The presence of Crassostrea virginica (Gmelin, 1791) and Saccosterea commercialis (Iredale & Roughley, 1933) in the Eastern Mediterranean Sea. La Conchiglia, 32(298): 25-28.
  • DAISIE, (2016). Crassostrea gigas species factsheet. Delivering alien species inventories for Europe. Retrieved in January 7, 2019 from http://www.europe-aliens.org/speciesFactsheet.do?speciesId=50156#
  • Doğan A., Önen M. & Öztürk B. (2007). Ildır Körfezi (İzmir Çeşme) Bivalvia (Mollusca) faunası. Türk Sucul Yaşam Dergisi, Ulusal Su Günleri 2007 Sempozyum Özel Sayısı: 27-35.
  • Diederich, S., Nehls, G., van Beusekom, J. E. E. & Reise, K. (2005). Introduced Pacific oysters (Crassostrea gigas) in the northern Wadden Sea: Invasion accelerated by warm summers? Helgoland Marine Research, 59(2): 97-106. https://doi.org/10.1007/s10152-004-0195-1
  • Dridi, S., Romdhane, M. S. & El Cafsi, M. (2006) Evidence of Crassostrea gigas reproduction in the Bizert Lagoon, Tunisia. Journal of Biology Research, 5: 35–45.
  • Dolmer, P., Holm, M. W., Strand, A, Lindergarth, S., Bodvin, T., Norling. P. & Mortensen, S. (2014). The invasive Pacific oyster, Crassostrea gigas, in Scandinavian coastal waters: A risk assessment on the impact in different habitats and climate conditions. Norway, Bergen: Institute of Marine Research, 2014 March. Report No.: 2/2014 Contract No: 80190.
  • Keskin, E. & Atar, H. H. (2013). DNA barcoding commercially important aquatic invertebrates of Turkey, Mitochondrial DNA, 24(4): 440-450. https://doi.org/10.3109/19401736.2012.762576
  • FAO. (2020). Fishery Statistics. Food and Agriculture Organization, Fisheries and Aquaculture Department. Retrieved in January 3, 2020 from http://www.fao.org/fishery/statistics/global-aquaculture-production/query/en
  • Folmer, O., Black, M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3(5): 294-299.
  • Galil, B. S. (2000). A sea under siege – alien species in the Mediterranean. Biological Invasions, 2: 177–186.
  • Galvão, M. S. N., Alves, P. M. F. & Hilsdorf, A. W. S. (2017). First record of the Saccostrea oyster in Bertioga, São Paulo, Brazil. Boletim do Instituto de Pesca, 43(4): 638-645. https://doi.org/10.20950/1678-2305.2017v43n4p638
  • Grizel, H. & Heral, M. (1991). Introduction in to France of the Japanese oyster (Crassostrea gigas). ICES Journal of Marine Science, 47(3): 399–403.
  • Hebert, P. D., Cywinska, A., Ball, S. L. & Dewaard, J. R. (2003). Biological identifications through DNA barcodes. Proceedings of the Royal Society of London. Series B: Biological Sciences, 270(1512): 313-321.
  • Işık, R. & Bilgen, G. (2019). Associations between genetic variants of the POU1F1 gene and production traits in Saanen goats. Archives Animal Breeding, 62(1): 249-255. https://doi.org/10.5194/aab-62-249-2019
  • Işık, R. (2019). The identification of novel single-nucleotide polymorphisms of equine beta-lactoglobulin and lactotransferrin genes. Journal of Equine Veterinary Science, 75: 60-64. https://doi.org/10.1016/j.jevs.2019.01.005
  • Kumar, S., Stecher, G. & Tamura, K. (2016). MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33(7): 1870-1874. https://doi.org/10.1093/molbev/msw054
  • Lallias, D., Boudry, P., Batista, F. M., Beaumont, A., King, J. W., Turner, J. R. & Lapègue, S. (2015). Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers. Biological invasions, 17(9): 2581-2595.
  • Lam, K. & Morton, B. (2006). Morphological and mitochondrial-DNA analysis of the Indo-West Pacific rock oysters (Ostreidae: Saccostrea species). Journal of Molluscan Studies, 72: 235–245.
  • Lapègue, S., Boutet, I., Leitão, A, Heuertebise, S., Garcia, P., Thiriot-Quiévreux, C. & Boudry, P. (2002). Trans-Atlantic distribution of mangrove oyster species revealed by 16S mtDNA and karyological analyses. The Biological Bulletin, 202(3): 232-242. https://doi.org/10.2307/1543473
  • Laugen, A. T., Hollander, J., Obst, M. & Strand, Å. (2015). The Pacific oyster (Crassostrea gigas) invasion in Scandinavian coastal waters in a changing climate: Impact on local ecosystem services. pp. 230-252. In: Canning-Clode, J. (Ed.), Biological invasions in changing ecosystems: Vectors, ecological impacts, management and predictions. Warsaw, Poland: De Gruyter Open Ltd. 488 p.
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There are 58 citations in total.

Details

Primary Language English
Subjects Hydrobiology
Journal Section Research Article
Authors

Emel Özcan Gökçek 0000-0001-6566-7680

Sefa Acarlı 0000-0002-5891-5938

Bilge Karahan 0000-0002-5609-5630

Pervin Vural 0000-0002-1810-1112

Evren Koban Baştanlar 0000-0002-6296-9728

Project Number FBA 2014-331
Publication Date June 30, 2020
Submission Date December 31, 2019
Acceptance Date February 3, 2020
Published in Issue Year 2020

Cite

APA Özcan Gökçek, E., Acarlı, S., Karahan, B., Vural, P., et al. (2020). First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey. Marine Science and Technology Bulletin, 9(1), 23-31. https://doi.org/10.33714/masteb.668529
AMA Özcan Gökçek E, Acarlı S, Karahan B, Vural P, Koban Baştanlar E. First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey. Mar. Sci. Tech. Bull. June 2020;9(1):23-31. doi:10.33714/masteb.668529
Chicago Özcan Gökçek, Emel, Sefa Acarlı, Bilge Karahan, Pervin Vural, and Evren Koban Baştanlar. “First Molecular Record of the Alien Species Pacific Oyster (Crassostrea Gigas, Thunberg 1793) in the Marmara Sea, Turkey”. Marine Science and Technology Bulletin 9, no. 1 (June 2020): 23-31. https://doi.org/10.33714/masteb.668529.
EndNote Özcan Gökçek E, Acarlı S, Karahan B, Vural P, Koban Baştanlar E (June 1, 2020) First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey. Marine Science and Technology Bulletin 9 1 23–31.
IEEE E. Özcan Gökçek, S. Acarlı, B. Karahan, P. Vural, and E. Koban Baştanlar, “First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey”, Mar. Sci. Tech. Bull., vol. 9, no. 1, pp. 23–31, 2020, doi: 10.33714/masteb.668529.
ISNAD Özcan Gökçek, Emel et al. “First Molecular Record of the Alien Species Pacific Oyster (Crassostrea Gigas, Thunberg 1793) in the Marmara Sea, Turkey”. Marine Science and Technology Bulletin 9/1 (June 2020), 23-31. https://doi.org/10.33714/masteb.668529.
JAMA Özcan Gökçek E, Acarlı S, Karahan B, Vural P, Koban Baştanlar E. First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey. Mar. Sci. Tech. Bull. 2020;9:23–31.
MLA Özcan Gökçek, Emel et al. “First Molecular Record of the Alien Species Pacific Oyster (Crassostrea Gigas, Thunberg 1793) in the Marmara Sea, Turkey”. Marine Science and Technology Bulletin, vol. 9, no. 1, 2020, pp. 23-31, doi:10.33714/masteb.668529.
Vancouver Özcan Gökçek E, Acarlı S, Karahan B, Vural P, Koban Baştanlar E. First molecular record of the alien species Pacific oyster (Crassostrea gigas, Thunberg 1793) in the Marmara Sea, Turkey. Mar. Sci. Tech. Bull. 2020;9(1):23-31.

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