Microsatellite loci for Black Sea turbot Scophthalmus maeoticus

Year 2016, Volume: 1 Issue: 3, 23 - 26, 20.09.2016

Serpil Karan Servet Ahmet Doğdu , Ali Uyan Mevlüt Gürlek Deniz Ergüden Cemal Turan

https://doi.org/10.28978/nesciences.286266

Abstract

Several microsatellite loci which were developed and reported for turbot Scophthalmus
maximus were examined for Scophthalmus maeoticus. Only five of these microsatellite loci
were successfully amplified with new developed PCR conditions and can be used for routine
analysis of stock identification of S. maeoticus. 

Keywords

Black Sea turbot, Scophthalmus maeoticus, microsatellite marker

References

• Azevedo, M.F., Oliveira, C., Pardo, B.G., Martínez, P., Foresti, F. (2008). Phylogenetic analysis of the order Pleuronectiformes (Teleostei) based on sequences of 12S and 16S mitochondrial genes. Genetics and Molecular Biology, 31(1), 284-292.
• Blanquer, A., Alayse, J.P., Berrada‐Rkhami, O., Berrebi, P. (1992). Allozyme variation in turbot (Psetta maxima) and brill (Scophthalmus rhombus) (Osteichthyes, Pleuronectoformes, Scophthalmidae) throughout their range in Europe. Journal of Fish Biology, 41(5), 725-736.
• Bouza, C., Presa, P., Castro, J., Sánchez, L., Martinez, P. (2002). Allozyme and microsatellite diversity in natural and domestic populations of turbot (Scophthalmus maximus) in comparison with other Pleuronectiformes. Canadian Journal of Fisheries and Aquatic Sciences, 59(9), 1460-1473.
• Estoup, A., Rousset, F., Michalakis, Y., Cornuet, J.M., Adriamanga, M., Guyomard, R. (1998). Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta). Molecular Ecology, 7(3), 339-353.
• Florin, A.B., & Höglund, J. (2007). Absence of population structure of turbot (Psetta maxima) in the Baltic Sea. Molecular Ecology, 16(1), 115-126.
• Iyengar, A., Piyapattanakorn, S., Heipel, D.A., Stone, D.M., Howell, B.R., Child, A.R., Maclean, N. (2000). A suite of highly polymorphic microsatellite markers in turbot (Scophthalmus maximus) with potential for use across several flatfish species. Molecular Ecology, 9, 365-378.
• Liu, Z.J., & Cordes, J.F. (2004). DNA marker technologies and their applications in aquaculture genetics. Aquaculture, 238(1), 1-37.
• Nielsen, E.E., Nielsen, P.H., Meldrup, D., Hansen, M. M. (2004). Genetic population structure of turbot (Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea. Molecular Ecology, 13(3), 585-595.
• Pardo, B.G., Bouza, C., Castro J., Martínez P., Sánchez, L. (2001). Localization of ribosomal genes in Pleuronectiformes using Ag and CMA3 banding and in situ hybridization. Heredity, 86, 531-536.
• Pardo, G.B., Casas, L., Fortes, G.G., Bouza, C., Martínez, P., Clark, M.S., Sánchez, L. (2005). New microsatellite markers in turbot (Scophthalmus maximus) derived from an enriched genomic library and sequence databases. Molecular Ecology Notes, 5(1), 62-64.
• Prodanov, K. & Mikhailov, K. (2003). Possibilities for applying Jones’Methods for turbot stock assessment and catch projection in the Black Sea. In: Work. on Dem. Res. in the Black Sea & Azov Sea (eds. B. Öztürk and S. Karakulak). Turkish Marine Research Foundation, Istanbul Turkey 14: 35-48.
• Prodonov, K., Mikhailov, K., Dasklov, G., Maxim, C., Chashchin, A., Arkhipov, A., Shlyakhov, V., Özdamar, E. (1997). Environmental Management of Fish Resources in the Black Sea and Their Rational Exploitation. General Fisheries Council for the Mediterranean, FAO Studies and Reviews, 60, 100-110.
• Sambrook, J., Fritsch, E.F., Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual Cold Spring. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
• Shaw, P.W., Turan, C., Wright, J.M., O’Connell, M., Carvalho, G.R. (1999). Microsatellite DNA analysis of population structure in Atlantic herring (Clupea harengus), with direct comparison to allozyme and mtDNA RFLP analyses. Heredity, 83(4), 490-499.
• Turan, C. (2007). Atlas and Systematic of Marine Bony Fishes of Turkey. Nobel Publishing House, Adana, 549 p.