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Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J

Year 2014, Volume: 31 Issue: 2, 0 - , 10.09.2014

Abstract

The aim of this study is to calculate the tympanic cavity (TC) volume with manual tracing technique on computed tomography images of temporal bone with a software developed in house using MATLAB platform. Images with slice thickness of 0.25 mm were obtained from newborn cadavers and analyzed by two expert researchers independently using the software and the results were compared. The borders of TC were delineated manually and measurement of interested area was calculated on masked images. Then, the area measurements from all sections were added for the calculation of total volume. Dice similarity coefficient (DSC), Jaccard, sensitivity and specificity were used as a statistical validation metric to evaluate the performance of manual volume measurement. TC volumes were calculated as a 0.272±0.04 cmand 0.286±0.03 cm3 by the two researchers with MATLAB, 0.287±0.06 cm3 with Image J. DSC values being above to 0.7 indicated that the software allows consistent and reliable volume measurements. This software can potentially be applied to measure other anatomical volumes from radiological images.

Year 2014, Volume: 31 Issue: 2, 0 - , 10.09.2014

Abstract

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Details

Primary Language English
Journal Section Basic Medical Sciences
Authors

Niyazi Acer

Erdoğan Unur This is me

M. Fatih Sönmez This is me

Gökmen Zararsız This is me

Ayla Arslan This is me

Mehmet Bilgen This is me

Tolga Ertekin This is me

Abdulhakim Coşkun This is me

Publication Date September 10, 2014
Submission Date September 10, 2014
Published in Issue Year 2014 Volume: 31 Issue: 2

Cite

APA Acer, N., Unur, E., Sönmez, M. F., Zararsız, G., et al. (2014). Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J. Journal of Experimental and Clinical Medicine, 31(2). https://doi.org/10.5835/jecm.v2i31.5000068731
AMA Acer N, Unur E, Sönmez MF, Zararsız G, Arslan A, Bilgen M, Ertekin T, Coşkun A. Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J. J. Exp. Clin. Med. September 2014;31(2). doi:10.5835/jecm.v2i31.5000068731
Chicago Acer, Niyazi, Erdoğan Unur, M. Fatih Sönmez, Gökmen Zararsız, Ayla Arslan, Mehmet Bilgen, Tolga Ertekin, and Abdulhakim Coşkun. “Evaluation of Tympanic Cavity Volume by Using Computed Tomography Scan With the MATLAB and Image J”. Journal of Experimental and Clinical Medicine 31, no. 2 (September 2014). https://doi.org/10.5835/jecm.v2i31.5000068731.
EndNote Acer N, Unur E, Sönmez MF, Zararsız G, Arslan A, Bilgen M, Ertekin T, Coşkun A (September 1, 2014) Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J. Journal of Experimental and Clinical Medicine 31 2
IEEE N. Acer, E. Unur, M. F. Sönmez, G. Zararsız, A. Arslan, M. Bilgen, T. Ertekin, and A. Coşkun, “Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J”, J. Exp. Clin. Med., vol. 31, no. 2, 2014, doi: 10.5835/jecm.v2i31.5000068731.
ISNAD Acer, Niyazi et al. “Evaluation of Tympanic Cavity Volume by Using Computed Tomography Scan With the MATLAB and Image J”. Journal of Experimental and Clinical Medicine 31/2 (September 2014). https://doi.org/10.5835/jecm.v2i31.5000068731.
JAMA Acer N, Unur E, Sönmez MF, Zararsız G, Arslan A, Bilgen M, Ertekin T, Coşkun A. Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J. J. Exp. Clin. Med. 2014;31. doi:10.5835/jecm.v2i31.5000068731.
MLA Acer, Niyazi et al. “Evaluation of Tympanic Cavity Volume by Using Computed Tomography Scan With the MATLAB and Image J”. Journal of Experimental and Clinical Medicine, vol. 31, no. 2, 2014, doi:10.5835/jecm.v2i31.5000068731.
Vancouver Acer N, Unur E, Sönmez MF, Zararsız G, Arslan A, Bilgen M, Ertekin T, Coşkun A. Evaluation of tympanic cavity volume by using computed tomography scan with the MATLAB and image J. J. Exp. Clin. Med. 2014;31(2).