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Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı

Year 2010, Volume: 67 Issue: 1, 33 - 43, 01.03.2010

Çigdem Vardar Kanlıtepe Sümer Aras Demet Cansaran Duman

Abstract

Tarımsal olarak önemli pek çok tür için moleküler belirteç haritaları oluşturulmuştur. Dünyada bu alanda fazla sayıda kaynak ve potansiyel var olmasına rağmen, henüz belirteç yardımlı seleksiyonla MAS gelişen tarım ürünleri için ticari ıslah programlarında beklenen düzeyde yarar sağlanamamaktadır. Bu derlemede, MAS kullanımındaki teknikler ile ilgili genel bilgilerin yanısıra bitki ıslahının hem temel genetik ilkeleri hem de klasik ıslah yöntemlerinden bahsedilmiştir. Ayrıca, bitki ıslahında karşılaşılan sorunlar biyoteknoloji ve genetik mühendislik yöntemleri dikkate alınarak ayrıntılı olarak incelenmiştir. Genetik ıslah aracı olarak belirteç yardımlı seleksiyon kullanımının potansiyel önemi değerlendirilirken bu tekniğin ekonomik maliyeti, yararları, potansiyel zararları da göz önünde bulundurulmalıdır

Keywords

Bitki ıslah moleküler belirteç

References

  • Yıldırım A. Bitki Islahında Markörler Yardımıyla Seleksiyon (MAS). Gaziosmanpaşa Üniv. Ziraat Fak. Tarla Bitkileri Bölümü, Tokat, http://genelbilgiler1. googlepages.com/AY-Markorler Yardımıyla Seleksiyon. pdf
  • fenbilimleri.ege.edu.tr/files/dersler/fen/9129Dokt.htm Althoff DM, Gitzendanner MA, Segraves KA. The utility of amplified fragment length polymorphisms in phylogenetics: a comparison of homology within and between genomes. Syst Biol, 2007; 56:477-84.
  • Hafez EE, Ghany AGAA, Zakil EA. LTR-retrotransposons based molecular markers in cultivated Egyptian cottons G. barbadense. Afr J Biotechnol, 2006; 5:1200-4.
  • Kafkas S, Perl-Traves R, Kaska N. Unusual Pistacia atlantica Desf. (Anacardiaceae) monoecious sex type in the Yunt Mountains of the Manisa Province of Turkey. Israil J Plant Sci, 2000; 48: 277- 80.
  • Parfitt DE, Badenes ML. Phylogeny of the genus Pistacia as determined from analysis of the chloroplast genome. Proc Natl Acad Sci USA, 1997; 94: 7987-92.
  • Kafkas S, Perl-Traves R. Interspecific relationships in Pistacia based on RAPD fingerprinting. Hortscience, 2002; 37(1): 168-71.
  • Ahmad R, Ferguson L, Southwick SM. Identification of Pistachio (Pistacia vera L.) nuts with microsatellite markers. J Amer Soc Hort Sci, 2003; 128 (6): 898- 903.
  • Ahmad R, Ferguson L, Southwick SM. Molecular marker analyses of Pistachio rootstocks by simple sequence repeats and sequence related amplified polymorphisms. J Hort Sci Biotech, 2005; 80 (3): 382-6.
  • Paglia G, Morgante M. PCR based multiplex DNA fingerprinting techniques for the analysis of Conifer genes. Mol Breeding, 1998; 4: 173-7.
  • Marques CM, Araujo JA, Ferreira JG, Whetten R, O’malley DM, Liu B-H, Sederoff R. AFLP genetic maps of Eucalyptus globulus and E. tereticornis. Theor Appl Genet, 1998; 96: 727-37.
  • Hurtado MA, Romero C, Vilanova S, Abbott AG, Llacer G, Badenes ML. Genetic linkage maps of two apricot cultivars (Prunus armenica L.) and mapping of PPV (sharka) resistance. Theor Appl Genet, 2002; 105: 182-91.
  • Carlier JD, Reis A, Duval MF, Coppens G, Leita JM. Genetic maps of RAPD, AFLP and ISSR markers in Ananas bracteatus and A. comosus using the pseudo-testcross strategy. Plant Breeding, 2004; 123: 186-92.
  • Beedanagari SR, Dove SK, Wood WB, Conner JP. A first linkage map of pecan cultivars based on RAPD and AFLP markers. Theor Appl Genet, 2005; 110: 1127-37.
  • Bolibok H, Rakoczy-Trojanowska M, Hromada A, Pietrzykowski R. Efficiency of different PCR based marker systems in assessing genetic diversity among Winter rye (Secale cereale L.) inbreed lines. Euphytica, 2005; 146: 109-16.
  • Duval MF, Bunel J, Sitbon C, Risterucci MA. Development of microsatellite markers for Mango (Mangifera indica L.). Mol Ecol Notes, 2005; 5: 824-6.
  • Gupta AK, Kang BY, Roy JK, Rajora OP. Large scale development of selectively amplified microsatellite polymorphic loci (SAMPL) markers in Spruce (Picea). Mol Ecol Notes, 2005; 5: 481-3.
  • Tam SM, Mhiri C, Vogelaar A, Kerkveld M, Pearce SR, Grandbastien M, Grandbastien A. Comperative analyses of genetic diversities within tomato and pepper collections detected by retrotranspozan based SSAP, AFLP and SSR. Theor Appl Genet, 2005; 110: 819-31.
  • Mnejja M, Garcia-Mas J, Howad W, Arus P. Development and transportability across Prunus species of 42 polymorphic almond microsatellites. Mol Ecol Notes, 2005; 5: 531-5.
  • Saha MC, Mian R, Zwonitzer JC, Chekhovskiy K, Hopkins AA. An SSR- and AFLP based genetic linkage map of tall fescue (Festuca arundinacea Schreb.). Theor Appl Genet, 2005; 110: 323-36.
  • Tosti N and Negri V. On going on farm micro evolutionary processes in neighbouring cowpea landraces revealed by moleculer markers. Theor Appl Genet, 2005; 110: 1275- 83.
  • Zhang J, Lu Y, Yu S. Cleaved AFLP (C-AFLP), a modified amplified fragment lenght polymorphism analysis for cotton. Theor Appl Genet, 2005; 111: 1385-95.
  • Cavalcanti JVJ, Wilkinsin JM. The First genetic maps of Cashew (Anacardium occidentale L.). Euphytica, 2007; 157: 131-43.
  • Boersma JG, Pallotta M, Li C, Buirchell JB, Sivasithamparam K, Yang H. Construction of a genetic linkage map using M-AFLP and identification of molecular markers linked to domestication genes in narrow-leafed Lupin (Lupinus angustifolius L.). Cell Mol Bio Lett, 2007; 10: 331- 44.
  • Altintas S, Toklu F, Kafkas S, Kilian B, Brandolini A, Özkan H. Estimating genetic diversity in durum and bread wheat cultivars from Turkey using AFLP and SAMPL markers. Plant Breeding, 2008; 127: 9-14.
  • Li HT, Li YX, Li ZC, Zhang Hl, Qi YW, Wang T. Simple sequence repeat analysis of genetic diversity in primary core collection of Peach (Prunus persica). J Integr Plt Biol, 2008; 50(1): 102-10.
  • Wei RP. Predicting Genetic Diversity And Optimizing Selection In Breeding Programmes. Ph. D. Thesis. Sweedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umea, 1995.
  • Ledig FT. The conservation of diversity in forest trees. why and how should genes be conserved? Bioscience, 1988; 38: 471-3.
  • Lindgren D. The Population Biology of Clonal Deployment. In: Clonal Forestry I, Genetics and Biotechnology, Springer Verlag,1993, 34-49.

Application of the Molecular Marker and Gene Transfer in Plant Breeding

Year 2010, Volume: 67 Issue: 1, 33 - 43, 01.03.2010

Çigdem Vardar Kanlıtepe Sümer Aras Demet Cansaran Duman

Abstract

Molecular marker maps have been constructed for the majority of agricultural important species. Despite the enormous potential and considerable resources invested in this field in the world, MAS has not yet delivered its expected benefits in commercial breeding programmes for crops development. This study provides an overview related to the techniques in using, MAS and the basic genetic principles of plant breeding and conventional breeding methods were discussed. In addition, the problems encountered of plant breeding by taking into account the biotechnology and genetic engineering methods were examined in detail. When evaluating the potential merits of applying MAS as a tool for genetic improvement, economic cost, benefits and potential hazards of this technique should be considered

Keywords

Plant breeding molecular marker

References

  • Yıldırım A. Bitki Islahında Markörler Yardımıyla Seleksiyon (MAS). Gaziosmanpaşa Üniv. Ziraat Fak. Tarla Bitkileri Bölümü, Tokat, http://genelbilgiler1. googlepages.com/AY-Markorler Yardımıyla Seleksiyon. pdf
  • fenbilimleri.ege.edu.tr/files/dersler/fen/9129Dokt.htm Althoff DM, Gitzendanner MA, Segraves KA. The utility of amplified fragment length polymorphisms in phylogenetics: a comparison of homology within and between genomes. Syst Biol, 2007; 56:477-84.
  • Hafez EE, Ghany AGAA, Zakil EA. LTR-retrotransposons based molecular markers in cultivated Egyptian cottons G. barbadense. Afr J Biotechnol, 2006; 5:1200-4.
  • Kafkas S, Perl-Traves R, Kaska N. Unusual Pistacia atlantica Desf. (Anacardiaceae) monoecious sex type in the Yunt Mountains of the Manisa Province of Turkey. Israil J Plant Sci, 2000; 48: 277- 80.
  • Parfitt DE, Badenes ML. Phylogeny of the genus Pistacia as determined from analysis of the chloroplast genome. Proc Natl Acad Sci USA, 1997; 94: 7987-92.
  • Kafkas S, Perl-Traves R. Interspecific relationships in Pistacia based on RAPD fingerprinting. Hortscience, 2002; 37(1): 168-71.
  • Ahmad R, Ferguson L, Southwick SM. Identification of Pistachio (Pistacia vera L.) nuts with microsatellite markers. J Amer Soc Hort Sci, 2003; 128 (6): 898- 903.
  • Ahmad R, Ferguson L, Southwick SM. Molecular marker analyses of Pistachio rootstocks by simple sequence repeats and sequence related amplified polymorphisms. J Hort Sci Biotech, 2005; 80 (3): 382-6.
  • Paglia G, Morgante M. PCR based multiplex DNA fingerprinting techniques for the analysis of Conifer genes. Mol Breeding, 1998; 4: 173-7.
  • Marques CM, Araujo JA, Ferreira JG, Whetten R, O’malley DM, Liu B-H, Sederoff R. AFLP genetic maps of Eucalyptus globulus and E. tereticornis. Theor Appl Genet, 1998; 96: 727-37.
  • Hurtado MA, Romero C, Vilanova S, Abbott AG, Llacer G, Badenes ML. Genetic linkage maps of two apricot cultivars (Prunus armenica L.) and mapping of PPV (sharka) resistance. Theor Appl Genet, 2002; 105: 182-91.
  • Carlier JD, Reis A, Duval MF, Coppens G, Leita JM. Genetic maps of RAPD, AFLP and ISSR markers in Ananas bracteatus and A. comosus using the pseudo-testcross strategy. Plant Breeding, 2004; 123: 186-92.
  • Beedanagari SR, Dove SK, Wood WB, Conner JP. A first linkage map of pecan cultivars based on RAPD and AFLP markers. Theor Appl Genet, 2005; 110: 1127-37.
  • Bolibok H, Rakoczy-Trojanowska M, Hromada A, Pietrzykowski R. Efficiency of different PCR based marker systems in assessing genetic diversity among Winter rye (Secale cereale L.) inbreed lines. Euphytica, 2005; 146: 109-16.
  • Duval MF, Bunel J, Sitbon C, Risterucci MA. Development of microsatellite markers for Mango (Mangifera indica L.). Mol Ecol Notes, 2005; 5: 824-6.
  • Gupta AK, Kang BY, Roy JK, Rajora OP. Large scale development of selectively amplified microsatellite polymorphic loci (SAMPL) markers in Spruce (Picea). Mol Ecol Notes, 2005; 5: 481-3.
  • Tam SM, Mhiri C, Vogelaar A, Kerkveld M, Pearce SR, Grandbastien M, Grandbastien A. Comperative analyses of genetic diversities within tomato and pepper collections detected by retrotranspozan based SSAP, AFLP and SSR. Theor Appl Genet, 2005; 110: 819-31.
  • Mnejja M, Garcia-Mas J, Howad W, Arus P. Development and transportability across Prunus species of 42 polymorphic almond microsatellites. Mol Ecol Notes, 2005; 5: 531-5.
  • Saha MC, Mian R, Zwonitzer JC, Chekhovskiy K, Hopkins AA. An SSR- and AFLP based genetic linkage map of tall fescue (Festuca arundinacea Schreb.). Theor Appl Genet, 2005; 110: 323-36.
  • Tosti N and Negri V. On going on farm micro evolutionary processes in neighbouring cowpea landraces revealed by moleculer markers. Theor Appl Genet, 2005; 110: 1275- 83.
  • Zhang J, Lu Y, Yu S. Cleaved AFLP (C-AFLP), a modified amplified fragment lenght polymorphism analysis for cotton. Theor Appl Genet, 2005; 111: 1385-95.
  • Cavalcanti JVJ, Wilkinsin JM. The First genetic maps of Cashew (Anacardium occidentale L.). Euphytica, 2007; 157: 131-43.
  • Boersma JG, Pallotta M, Li C, Buirchell JB, Sivasithamparam K, Yang H. Construction of a genetic linkage map using M-AFLP and identification of molecular markers linked to domestication genes in narrow-leafed Lupin (Lupinus angustifolius L.). Cell Mol Bio Lett, 2007; 10: 331- 44.
  • Altintas S, Toklu F, Kafkas S, Kilian B, Brandolini A, Özkan H. Estimating genetic diversity in durum and bread wheat cultivars from Turkey using AFLP and SAMPL markers. Plant Breeding, 2008; 127: 9-14.
  • Li HT, Li YX, Li ZC, Zhang Hl, Qi YW, Wang T. Simple sequence repeat analysis of genetic diversity in primary core collection of Peach (Prunus persica). J Integr Plt Biol, 2008; 50(1): 102-10.
  • Wei RP. Predicting Genetic Diversity And Optimizing Selection In Breeding Programmes. Ph. D. Thesis. Sweedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umea, 1995.
  • Ledig FT. The conservation of diversity in forest trees. why and how should genes be conserved? Bioscience, 1988; 38: 471-3.
  • Lindgren D. The Population Biology of Clonal Deployment. In: Clonal Forestry I, Genetics and Biotechnology, Springer Verlag,1993, 34-49.
There are 28 citations in total.

Details

Primary Language Turkish
Journal Section Collection
Authors

Çigdem Vardar Kanlıtepe This is me

Sümer Aras This is me

Demet Cansaran Duman This is me

Publication Date March 1, 2010
Published in Issue Year 2010 Volume: 67 Issue: 1

Cite

APA Kanlıtepe, Ç. V., Aras, S., & Duman, D. C. (2010). Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı. Türk Hijyen Ve Deneysel Biyoloji Dergisi, 67(1), 33-43.
AMA Kanlıtepe ÇV, Aras S, Duman DC. Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı. Turk Hij Den Biyol Derg. March 2010;67(1):33-43.
Chicago Kanlıtepe, Çigdem Vardar, Sümer Aras, and Demet Cansaran Duman. “Bitki Islahında Moleküler Belirteçlerin Kullanımı Ve Gen Aktarımı”. Türk Hijyen Ve Deneysel Biyoloji Dergisi 67, no. 1 (March 2010): 33-43.
EndNote Kanlıtepe ÇV, Aras S, Duman DC (March 1, 2010) Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı. Türk Hijyen ve Deneysel Biyoloji Dergisi 67 1 33–43.
IEEE Ç. V. Kanlıtepe, S. Aras, and D. C. Duman, “Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı”, Turk Hij Den Biyol Derg, vol. 67, no. 1, pp. 33–43, 2010.
ISNAD Kanlıtepe, Çigdem Vardar et al. “Bitki Islahında Moleküler Belirteçlerin Kullanımı Ve Gen Aktarımı”. Türk Hijyen ve Deneysel Biyoloji Dergisi 67/1 (March 2010), 33-43.
JAMA Kanlıtepe ÇV, Aras S, Duman DC. Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı. Turk Hij Den Biyol Derg. 2010;67:33–43.
MLA Kanlıtepe, Çigdem Vardar et al. “Bitki Islahında Moleküler Belirteçlerin Kullanımı Ve Gen Aktarımı”. Türk Hijyen Ve Deneysel Biyoloji Dergisi, vol. 67, no. 1, 2010, pp. 33-43.
Vancouver Kanlıtepe ÇV, Aras S, Duman DC. Bitki Islahında Moleküler Belirteçlerin Kullanımı ve Gen Aktarımı. Turk Hij Den Biyol Derg. 2010;67(1):33-4.