Türkiye’den Yeni Bir Cirsium (Asteraceae) Hibriti, Cirsium x giresunicum
Year 2023,
Volume: 4 Issue: 2, 125 - 138, 15.12.2023
Veysel Uzun
,
Tuncay Dirmenci
,
Taner Özcan
,
Turan Arabacı
,
Bayram Yıldız
Abstract
Bu çalışmada Cirsium cinsine ait yeni bir hibrit olan Cirsium x giresunicum tanımlanmaktadır. Cinsin Epitrachys seksiyonunda yer alan C. poluninii ve C. trachylepis türleri arasında oluşan bu hibrit, morfolojik ve moleküler açıdan analiz edilmiştir. Morfolojik incelemelerde yeni hibritin bazı özelliklerini ebeveynleri ile paylaştığı, bazı özelliklerinin iki ebeveynin özellikleri arasında geçiş formunda olduğu, bazı özelliklerinin ise ebeveynlerin özelliklerinden farklılık gösterdiği tespit edilmiştir. Hibrit bireyler, yaşam formu, gövde boyu, gövde rengi gibi özellikler ile C. poluninii türüne benzerken, dış fillarilerinin dikencikli ve orta fillarilerinin geriye kıvrık olması gibi özellikleri ile de C. trachylepis’e benzemektedir. Moleküler analizler kapsamında çekirdek genomuna ait ITS bölgesi kullanılmıştır. Moleküler sonuçlar, Cirsium x giresunicum’un nükleer ITS genomlarında bazı polimorfik nükleotid bölgelerine sahip olduğunu ve iki atasının arasında bir konumda olduğunu göstermektedir. Bu konumlanma da, aslında hibrit bireylerin moleküler açıdan da ara karakterlere sahip olduğunu göstermektedir.
Ethical Statement
Bu çalışma orijinal veriler içermektedir. Çalışmanın ana temasını oluşturan veriler daha önce başka bir dergiye yayınlanmak üzere gönderilmemiş ve yayınlanmamıştır.
Supporting Institution
Balıkesir Üniversitesi Araştırma Projeleri Birimi
Project Number
BAP-2021/012
Thanks
Maddi desteklerinden dolayı Balıkesir Üniversitesi BAP Birimine Teşekkür ederiz.
References
- Ackerfield, J., Susanna, A., Funk, V., Kelch, D., Park, D.S., Thornhill, A.H., Yıldız, B., Arabacı, T. & Dirmenci, T. (2020). A prickly puzzle: generic delimitations in the Carduus-Cirsium group (Compositae: Cardueae: Carduinae). Taxon 69: 715−738. DOI: https://doi.org/10.1002/tax.12288.
- Arabacı, T., Çelenk, S., Özcan, T., Martin, E., Yazıcı, T., Açar, M., Üzel, D. & Dirmenci, T. (2021). Homoploid hybrids of Origanum (Lamiaceae) in Turkey: morphological and molecular evidence for a new hybrid. Plant Biosyst 155(3): 470−482. DOI: https://doi.org/10.1080/11263504.2020.1762777.
- Bureš, P., Wang, YF., Horova, L. & Suda, J. (2004). Genome size variation in Central European species of Cirsium (Compositae) and their natural hybrids. Ann Bot-London 94: 353−363. DOI: https://doi.org/10.1093/aob/mch151.
- Bureš, P., Smerda, J., Michalkova, E., Smarda, P., Knoll, A. & Vavrinec, M. (2018). Cirsium greimleri: a new species of thistle endemic to the Eastern Alps and Dinarides. Preslia 90: 105−134. DOI: https://doi.org/10.23855/preslia.2018.105.
- Bureš, P., Özcan, M., Šmerda, J., Michálková, E., Horová, L., Plačková, K., Šmarda, P., Elliott, T. L., Veselý, P., Ćato, S., Norouzi, M., Sheidai, M. & Zedek F. (2023). Evolution of genome size and GC content in the tribe Carduinae (Asteraceae): rare descending dysploidy and polyploidy, limited environmental control and strong phylogenetic signal. Preslia 95: 185−213. DOI: https://doi.org/10.23855/preslia.2023.185.
- Charadze, A.L. (1963). [Cirsium Mill.] In: Bobrov, E.G. & Cherepanov, S.K. (Eds.). Flora of the USSR. Vol. 28. Izdatel’stvo Akademii Nauk SSSR, Moscow, pp. 63−270.
- Cattaneo, C. & Dirmenci, T. (2022). A new hybrid of the genus Origanum L. (Lamiaceae): Origanum × symes Carlström. Istanbul Journal of Pharmacy 52 (2): 1–6. DOI: https://doi.org/10.26650/istanbulJPharm.2022.1034352.
- Cattaneo, C., Dimarchou, T., Özcan, T. & Dirmenci T. (2022). A new hybrid of Origanum (Lamiaceae) from the Aegean Island of Karpathos (Dodecanese, Greece): Origanum × karpathicum. Phytotaxa 560(1):43‒56. DOI: https://doi.org/10.11646/phytotaxa.560.1.3.
- Davis, P.H. & Parris, S.B. (1975). [Cirsium Mill.] In: Davis, P.H. (Ed.). Flora of Turkey and the East Aegean Islands. Vol. 5. Edinburgh University Press, Edinburgh, pp. 370−412.
- Del Guacchio, E., Bureš, P., Iamonico, D., Carucci, F., De Luca, D., Zedek, F. & Caputo, P. (2022). Towards a monophyletic classification of Cardueae: restoration of the genus Lophiolepis (= Cirsium pp) and new circumscription of Epitrachys. Plant Biosyst 156(5): 1269−1290. DOI: https://doi.org/10.1080/11263504.2022.2131924.
- Dirmenci, T., Yazıcı, T., Özcan, T., Çelenk, S. & Martin, E. (2018). A new species and a new natural hybrid of Origanum L. (Lamiaceae) from the west of Turkey. Turk J Bot 42(1): 73–90. DOI: https://doi.org/10.3906/bot-1704-35.
- Dirmenci, T., Özcan, T., Arabacı, T., Çelenk, S., İsmayilova, G. & Yıldız, B. (2019). Hybridization among three Cirsium (Asteraceae) species and important evidence for three new hybrids from Turkey. Turk J Bot 43(3): 366−385. DOI: https://doi.org/10.3906/bot-1806-53.
- Dirmenci, T., Duman, H. & Arabacı, T. (2020). Türkiye’den yeni bir Köygöçüren [Cirsium Mill. (Papatyagiller / Asteraceae)] türü ve cinsin şüpheli bir türünün yeniden keşfi. Bağbahçe Bilim Dergisi 7(3): 35−44.
- Duman, H., Tugay, O., Dirmenci, T. & Ertuğrul, K. (2017). A new species of Cirsium sect. Epitrachys (Asteraceae:Cardueae) from the south of Turkey. Turk J Bot 41(4): 375‒382. DOI: https://10.3906/bot-1612-33.
- Hall, T.A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis.
Program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95–98.
- Kang, S., Choi, B. & Jang, T. S. (2021). Chromosome evolution in Korean Carduus-Cirsium taxa (Asteraceae). Cytologia 86(4): 375−384. DOI: https://doi.org/10.1508/cytologia.86.375.
- Kadereit, J.W. & Jeffrey, C. (2007). The Families and Genera of Vascular Plants. Vol. 8. Springer, Berlin, pp. 131−132.
- Kelch, D.G. & Baldwin, B.G. (2003). Phylogeny and ecological radiation of New World thistles (Cirsium, Cardueae–Compositae) based on ITS and ETS rDNA sequence data. Mol Ecol 12(1): 141−151. DOI: https://doi.org/10.1046/j.1365-294X.2003.01710.x.
- Miller, M., Pfeiffer, W.T. & Schwartz, T. (2010). Creating the CIPRES science gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop pp. 1−8. DOI: https://doi.org/10.1109/GCE.2010.5676129.
- Moreyra, L.D., Garcia-Jacas, N., Roquet, C., Ackerfield, J.R., Arabacı, T., Blanco-Gavaldà, C., Brochmann, C., Calleja, J.A., Dirmenci, T., Fujikawa, K., Galbany-Casals, M., Gao, T., Gizaw, A., López-Alvarado, J., Mehregan, I., Vilatersana, R., Yıldız, B., Leliaert, F., Seregin, A.P. & Susanna, A. (2023). African mountain thistles: three new genera in the Carduus-Cirsium group. Plants 12(17): 3083. DOI: https://doi.org/10.3390/plants12173083.
- Nouroozi, M., Sheidai, M., Attar, F. & Noormohammadi, Z. (2012). Pollen morphological studies on the genus Cirsium Mill. (Asteraceae) in Iran. Jpn J Bot 87(4): 272−283.
- Petrak, F. (1979). [Cirsium Mill.] In: Rechinger, K.H. (Ed.). Flora Iranica. Compositae III-Cynareae. Vol. 139a. Akademische Druck-u Verlagsanstalt, Graz, pp. 231−280.
- POWO (2023). Plants of the World Online. https://powo.science.kew.org/ [23.10.2023].
- Segarra-Moragues, J.G., Villar, L., Lopez, J., Perez-Collazos, E. & Catalan, P. (2007). A new Pyrenean hybrid Cirsium (Asteraceae) as revealed by morphological and molecular analyses. Bot J Linn Soc 154(3): 421−434. DOI: https://doi.org/10.1111/j.1095-8339.2007.00668.x.
- Shaw, J., Lickey, E.B., Schilling, E.E. & Small, R.L. (2007). Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III. Am J Bot 94(3): 275–288. DOI: https://doi.org/10.3732/ajb.94.3.275.
- Slotta, T.A.B., Horvath, D.P. & Foley, M.E. (2012). Phylogeny of Cirsium spp. in North America: host specificity does not follow phylogeny. Plants 1(2): 61−73. DOI: https://doi.org/10.3390/plants1020061.
- Stanford, A.M., Harden, R. & Parks, C.R. (2000). Phylogeny and biogeography of Juglans (Juglandaceae) based on matK and ITS sequence data. Am J Bot 87(6): 872−882. DOI: https://doi.org/10.2307/2656895.
- Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994). CLUSTAL W: improving the sensitivity of progressing multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22(22): 4673–4680. DOI: https://doi.org/10.1093/nar/22.22.4673.
- Werner, K. (1976). [Cirsium Mill.] In: Tutin, T.G., Heywood, V.H., Burges, N.A., Moore, D.M., Valentine, D.H., Walters, S.M., Webb, D.A. (Eds.). Flora Europaea. Vol. 4. Cambridge University Press, Cambridge, pp. 232−242.
- White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990). [Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics] In: Innis, M., Gelfand, D., Sninsky, J. & White, T. (Eds.). PCR Protocols: A guide to Methods and Applications. Academic Press, San Diego, pp. 315−322. DOI: https://doi.org/10.1016/B978-0-12-372180-8.50042-1.
- Yıldız, B. (2012). [Cirsium Mill.] In: Güner, A., Aslan, S., Ekim, T., Vural, M. & Babaç, T. (Eds.). Türkiye Bitkileri Listesi (Damarlı Bitkiler). Nezahat Gökyiğit Botanik Bahçesi ve Flora Araştırmaları Derneği Yayını, İstanbul, pp. 141−146.
- Yıldız, B., Arabacı, T., Dirmenci, T. & Köstekçi, S. (2016). A taxonomic revision of the genus Cirsium Mill. sect. Cirsium (Asteraceae: Cardueae) in Turkey. Turk J Bot 40(5): 514−530. DOI: https://doi.org/10.3906/bot-1503-35.
- Zhou, X., Ma, J., Wang, W., Gong, N., Zhang, Y. & Liu, J. (2010). Genome size of the diploid hybrid species hippophae goniocarpa and its parental species, H. rhamnoides ssp. sinensis and H. neurocarpa ssp. neurocarpa (Elaeagnaceae). Acta Biologica Cracoviensia - Series Botanica 52(2): 12−16 DOI: https://doi.org/10.2478/v10182-010-0018-4.
A New Cirsium (Asteraceae) Hybrid from Türkiye, Cirsium x giresunicum
Year 2023,
Volume: 4 Issue: 2, 125 - 138, 15.12.2023
Veysel Uzun
,
Tuncay Dirmenci
,
Taner Özcan
,
Turan Arabacı
,
Bayram Yıldız
Abstract
In this study, a new hybrid of the Cirsium genus, Cirsium x giresunicum, is described. This hybrid formed between C. poluninii and C. trachylepis in the Epitrachys section was analyzed morphologically and molecularly. In morphological examinations, it was observed that the new hybrid showed transitional characters between its parents. While the hybrid individuals resemble C. poluninii species with features such as life form, stem length and color, they also resemble C. trachylepis species with features such as the outer phyllaries being spiny and the middle phyllaries being curved backward. Within the scope of molecular analyses, the ITS region of the nuclear genome was used. Molecular results show that Cirsium x giresunicum has some polymorphic nucleotide regions in its nuclear ITS genomes appears to be positioned between its two parents. This indicates that hybrid individuals also possess intermediate molecular characteristics.
Project Number
BAP-2021/012
References
- Ackerfield, J., Susanna, A., Funk, V., Kelch, D., Park, D.S., Thornhill, A.H., Yıldız, B., Arabacı, T. & Dirmenci, T. (2020). A prickly puzzle: generic delimitations in the Carduus-Cirsium group (Compositae: Cardueae: Carduinae). Taxon 69: 715−738. DOI: https://doi.org/10.1002/tax.12288.
- Arabacı, T., Çelenk, S., Özcan, T., Martin, E., Yazıcı, T., Açar, M., Üzel, D. & Dirmenci, T. (2021). Homoploid hybrids of Origanum (Lamiaceae) in Turkey: morphological and molecular evidence for a new hybrid. Plant Biosyst 155(3): 470−482. DOI: https://doi.org/10.1080/11263504.2020.1762777.
- Bureš, P., Wang, YF., Horova, L. & Suda, J. (2004). Genome size variation in Central European species of Cirsium (Compositae) and their natural hybrids. Ann Bot-London 94: 353−363. DOI: https://doi.org/10.1093/aob/mch151.
- Bureš, P., Smerda, J., Michalkova, E., Smarda, P., Knoll, A. & Vavrinec, M. (2018). Cirsium greimleri: a new species of thistle endemic to the Eastern Alps and Dinarides. Preslia 90: 105−134. DOI: https://doi.org/10.23855/preslia.2018.105.
- Bureš, P., Özcan, M., Šmerda, J., Michálková, E., Horová, L., Plačková, K., Šmarda, P., Elliott, T. L., Veselý, P., Ćato, S., Norouzi, M., Sheidai, M. & Zedek F. (2023). Evolution of genome size and GC content in the tribe Carduinae (Asteraceae): rare descending dysploidy and polyploidy, limited environmental control and strong phylogenetic signal. Preslia 95: 185−213. DOI: https://doi.org/10.23855/preslia.2023.185.
- Charadze, A.L. (1963). [Cirsium Mill.] In: Bobrov, E.G. & Cherepanov, S.K. (Eds.). Flora of the USSR. Vol. 28. Izdatel’stvo Akademii Nauk SSSR, Moscow, pp. 63−270.
- Cattaneo, C. & Dirmenci, T. (2022). A new hybrid of the genus Origanum L. (Lamiaceae): Origanum × symes Carlström. Istanbul Journal of Pharmacy 52 (2): 1–6. DOI: https://doi.org/10.26650/istanbulJPharm.2022.1034352.
- Cattaneo, C., Dimarchou, T., Özcan, T. & Dirmenci T. (2022). A new hybrid of Origanum (Lamiaceae) from the Aegean Island of Karpathos (Dodecanese, Greece): Origanum × karpathicum. Phytotaxa 560(1):43‒56. DOI: https://doi.org/10.11646/phytotaxa.560.1.3.
- Davis, P.H. & Parris, S.B. (1975). [Cirsium Mill.] In: Davis, P.H. (Ed.). Flora of Turkey and the East Aegean Islands. Vol. 5. Edinburgh University Press, Edinburgh, pp. 370−412.
- Del Guacchio, E., Bureš, P., Iamonico, D., Carucci, F., De Luca, D., Zedek, F. & Caputo, P. (2022). Towards a monophyletic classification of Cardueae: restoration of the genus Lophiolepis (= Cirsium pp) and new circumscription of Epitrachys. Plant Biosyst 156(5): 1269−1290. DOI: https://doi.org/10.1080/11263504.2022.2131924.
- Dirmenci, T., Yazıcı, T., Özcan, T., Çelenk, S. & Martin, E. (2018). A new species and a new natural hybrid of Origanum L. (Lamiaceae) from the west of Turkey. Turk J Bot 42(1): 73–90. DOI: https://doi.org/10.3906/bot-1704-35.
- Dirmenci, T., Özcan, T., Arabacı, T., Çelenk, S., İsmayilova, G. & Yıldız, B. (2019). Hybridization among three Cirsium (Asteraceae) species and important evidence for three new hybrids from Turkey. Turk J Bot 43(3): 366−385. DOI: https://doi.org/10.3906/bot-1806-53.
- Dirmenci, T., Duman, H. & Arabacı, T. (2020). Türkiye’den yeni bir Köygöçüren [Cirsium Mill. (Papatyagiller / Asteraceae)] türü ve cinsin şüpheli bir türünün yeniden keşfi. Bağbahçe Bilim Dergisi 7(3): 35−44.
- Duman, H., Tugay, O., Dirmenci, T. & Ertuğrul, K. (2017). A new species of Cirsium sect. Epitrachys (Asteraceae:Cardueae) from the south of Turkey. Turk J Bot 41(4): 375‒382. DOI: https://10.3906/bot-1612-33.
- Hall, T.A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis.
Program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95–98.
- Kang, S., Choi, B. & Jang, T. S. (2021). Chromosome evolution in Korean Carduus-Cirsium taxa (Asteraceae). Cytologia 86(4): 375−384. DOI: https://doi.org/10.1508/cytologia.86.375.
- Kadereit, J.W. & Jeffrey, C. (2007). The Families and Genera of Vascular Plants. Vol. 8. Springer, Berlin, pp. 131−132.
- Kelch, D.G. & Baldwin, B.G. (2003). Phylogeny and ecological radiation of New World thistles (Cirsium, Cardueae–Compositae) based on ITS and ETS rDNA sequence data. Mol Ecol 12(1): 141−151. DOI: https://doi.org/10.1046/j.1365-294X.2003.01710.x.
- Miller, M., Pfeiffer, W.T. & Schwartz, T. (2010). Creating the CIPRES science gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop pp. 1−8. DOI: https://doi.org/10.1109/GCE.2010.5676129.
- Moreyra, L.D., Garcia-Jacas, N., Roquet, C., Ackerfield, J.R., Arabacı, T., Blanco-Gavaldà, C., Brochmann, C., Calleja, J.A., Dirmenci, T., Fujikawa, K., Galbany-Casals, M., Gao, T., Gizaw, A., López-Alvarado, J., Mehregan, I., Vilatersana, R., Yıldız, B., Leliaert, F., Seregin, A.P. & Susanna, A. (2023). African mountain thistles: three new genera in the Carduus-Cirsium group. Plants 12(17): 3083. DOI: https://doi.org/10.3390/plants12173083.
- Nouroozi, M., Sheidai, M., Attar, F. & Noormohammadi, Z. (2012). Pollen morphological studies on the genus Cirsium Mill. (Asteraceae) in Iran. Jpn J Bot 87(4): 272−283.
- Petrak, F. (1979). [Cirsium Mill.] In: Rechinger, K.H. (Ed.). Flora Iranica. Compositae III-Cynareae. Vol. 139a. Akademische Druck-u Verlagsanstalt, Graz, pp. 231−280.
- POWO (2023). Plants of the World Online. https://powo.science.kew.org/ [23.10.2023].
- Segarra-Moragues, J.G., Villar, L., Lopez, J., Perez-Collazos, E. & Catalan, P. (2007). A new Pyrenean hybrid Cirsium (Asteraceae) as revealed by morphological and molecular analyses. Bot J Linn Soc 154(3): 421−434. DOI: https://doi.org/10.1111/j.1095-8339.2007.00668.x.
- Shaw, J., Lickey, E.B., Schilling, E.E. & Small, R.L. (2007). Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III. Am J Bot 94(3): 275–288. DOI: https://doi.org/10.3732/ajb.94.3.275.
- Slotta, T.A.B., Horvath, D.P. & Foley, M.E. (2012). Phylogeny of Cirsium spp. in North America: host specificity does not follow phylogeny. Plants 1(2): 61−73. DOI: https://doi.org/10.3390/plants1020061.
- Stanford, A.M., Harden, R. & Parks, C.R. (2000). Phylogeny and biogeography of Juglans (Juglandaceae) based on matK and ITS sequence data. Am J Bot 87(6): 872−882. DOI: https://doi.org/10.2307/2656895.
- Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994). CLUSTAL W: improving the sensitivity of progressing multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22(22): 4673–4680. DOI: https://doi.org/10.1093/nar/22.22.4673.
- Werner, K. (1976). [Cirsium Mill.] In: Tutin, T.G., Heywood, V.H., Burges, N.A., Moore, D.M., Valentine, D.H., Walters, S.M., Webb, D.A. (Eds.). Flora Europaea. Vol. 4. Cambridge University Press, Cambridge, pp. 232−242.
- White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990). [Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics] In: Innis, M., Gelfand, D., Sninsky, J. & White, T. (Eds.). PCR Protocols: A guide to Methods and Applications. Academic Press, San Diego, pp. 315−322. DOI: https://doi.org/10.1016/B978-0-12-372180-8.50042-1.
- Yıldız, B. (2012). [Cirsium Mill.] In: Güner, A., Aslan, S., Ekim, T., Vural, M. & Babaç, T. (Eds.). Türkiye Bitkileri Listesi (Damarlı Bitkiler). Nezahat Gökyiğit Botanik Bahçesi ve Flora Araştırmaları Derneği Yayını, İstanbul, pp. 141−146.
- Yıldız, B., Arabacı, T., Dirmenci, T. & Köstekçi, S. (2016). A taxonomic revision of the genus Cirsium Mill. sect. Cirsium (Asteraceae: Cardueae) in Turkey. Turk J Bot 40(5): 514−530. DOI: https://doi.org/10.3906/bot-1503-35.
- Zhou, X., Ma, J., Wang, W., Gong, N., Zhang, Y. & Liu, J. (2010). Genome size of the diploid hybrid species hippophae goniocarpa and its parental species, H. rhamnoides ssp. sinensis and H. neurocarpa ssp. neurocarpa (Elaeagnaceae). Acta Biologica Cracoviensia - Series Botanica 52(2): 12−16 DOI: https://doi.org/10.2478/v10182-010-0018-4.