Research Article

Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes

Volume: 25 Number: 1 March 13, 2019
  • Ali Asghari
  • Rahmatollah Karimizadeh
  • Rahim Chinipardaz
  • Omid Sofalian
  • Abdolali Ghaffari
  • Kamal Shahbazi
  • Tahmasb Hosseinpour
  • Hassan Ghojog
  • Mohammad Armion
EN

Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes

Abstract

Genotype × environment interactions complicate selection of superior genotypes for narrow and wide adaptation. Multienvironment yield trials of twenty durum wheat genotypes were conducted at five locations of Iran (Gachsaran, Gonbad, Moghan, Ilam and Khorram abad) over four years (2009-2013). Combined ANOVA of yield data of the twenty environments (year/location combined) revealed highly significant differences among genotypes and environments as well as significant genotype-environment interaction indicated differential performance of genotypes over test environments. The GE interaction was examined using multivariate analysis technique as principal coordinate analysis (PCOA). According to grand means and total mean yield, test environments were grouped into two main groups as high mean yield (H) and low mean yield (L). There were eleven H test environments and nine L test environments which analyzed in the sequential cycles. For each cycle, both scatter point diagram and minimum spanning tree plot were drawn. The identified most stable genotypes with dynamic stability concept and based on the minimum spanning tree plots and centroid distances were G12 (3342 kg ha-1), G10 (3470.3 kg ha-1), G5 (3203.0 kg ha-1), and G1 (3263.5 kg ha-1), and therefore could be recommended for unfavorable or poor conditions. Genotypes G10 (3470.3 kg ha-1) and G9 (3404.2 kg ha-1) were located several times in the vertex positions of high cycles according to the principal coordinates analysis (PCOA) and therefore could be recommended for favorable or rich conditions. Finally, the results of principal coordinates analysis in general confirmed the breeding value of the genotypes, obtained on the basis of the yield stability evaluation. 

Keywords

References

  1. Akcura M, Kaya Y & Taner, S (2009). Evaluation of durum wheat genotypes using parametric and nonparametric stability statistics. Turkish Journal of Field Crops 14(2): 111-122
  2. Becker H C & Leon J (1988). Stability analysis in plant breeding. Plant Breeding 101: 1-23
  3. FAOSTAT (2010). Data stat year 2015. Food Agriculture Organization, (http://faostat.fao.org/) verified 2 Feb. 2015. Rome, Italy
  4. Finlay K W & Wilkinson G N (1963). The analysis of adaptation in a plant-breeding programme. Australian Journal of Agricultural Research 14: 742-754
  5. Flores F, Moreno M T, Martinez A & Cubero J I (1996). Genotype × environment interaction in faba bean: Comparison of AMMI and principal coordinate models. Field Crops Research 47: 117-127
  6. GENSTAT Committee (2009). GENSTAT 12 release 1, Reference Manual. Clarendon Press, Oxford, UK
  7. Gower J C (1966). Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika 53: 325-338
  8. Ibanmez M A, Direnzo M A, Samame S S, Bonamico N C & Poverene M M (2001). Genotype–environment interaction of lovegrass forage yield in the semi-arid region of Argentina. Journal of Agricultural Science 137: 329-336

Details

Primary Language

English

Subjects

Engineering

Journal Section

Research Article

Authors

Ali Asghari
Department of Agronomy and Plant Breeding, Faculty of Agriculture and Natural Resources, University of Mohaghegh Ardabili, Ardabil, Iran
Iran

Rahmatollah Karimizadeh This is me
Iran

Rahim Chinipardaz This is me
Iran

Abdolali Ghaffari This is me
Iran

Kamal Shahbazi This is me
Iran

Tahmasb Hosseinpour This is me
Iran

Hassan Ghojog This is me
Iran

Mohammad Armion This is me
Iran

Publication Date

March 13, 2019

Submission Date

October 23, 2017

Acceptance Date

March 1, 2018

Published in Issue

Year 2019 Volume: 25 Number: 1

APA
Asghari, A., Karimizadeh, R., Chinipardaz, R., Sofalian, O., Ghaffari, A., Shahbazi, K., Hosseinpour, T., Ghojog, H., & Armion, M. (2019). Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes. Journal of Agricultural Sciences, 25(1), 38-46. https://doi.org/10.15832/ankutbd.538993
AMA
1.Asghari A, Karimizadeh R, Chinipardaz R, et al. Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes. J Agr Sci-Tarim Bili. 2019;25(1):38-46. doi:10.15832/ankutbd.538993
Chicago
Asghari, Ali, Rahmatollah Karimizadeh, Rahim Chinipardaz, et al. 2019. “Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes”. Journal of Agricultural Sciences 25 (1): 38-46. https://doi.org/10.15832/ankutbd.538993.
EndNote
Asghari A, Karimizadeh R, Chinipardaz R, Sofalian O, Ghaffari A, Shahbazi K, Hosseinpour T, Ghojog H, Armion M (March 1, 2019) Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes. Journal of Agricultural Sciences 25 1 38–46.
IEEE
[1]A. Asghari et al., “Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes”, J Agr Sci-Tarim Bili, vol. 25, no. 1, pp. 38–46, Mar. 2019, doi: 10.15832/ankutbd.538993.
ISNAD
Asghari, Ali - Karimizadeh, Rahmatollah - Chinipardaz, Rahim - Sofalian, Omid - Ghaffari, Abdolali - Shahbazi, Kamal - Hosseinpour, Tahmasb - Ghojog, Hassan - Armion, Mohammad. “Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes”. Journal of Agricultural Sciences 25/1 (March 1, 2019): 38-46. https://doi.org/10.15832/ankutbd.538993.
JAMA
1.Asghari A, Karimizadeh R, Chinipardaz R, Sofalian O, Ghaffari A, Shahbazi K, Hosseinpour T, Ghojog H, Armion M. Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes. J Agr Sci-Tarim Bili. 2019;25:38–46.
MLA
Asghari, Ali, et al. “Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes”. Journal of Agricultural Sciences, vol. 25, no. 1, Mar. 2019, pp. 38-46, doi:10.15832/ankutbd.538993.
Vancouver
1.Ali Asghari, Rahmatollah Karimizadeh, Rahim Chinipardaz, Omid Sofalian, Abdolali Ghaffari, Kamal Shahbazi, Tahmasb Hosseinpour, Hassan Ghojog, Mohammad Armion. Use of Principal Coordinate Analysis for Measuring GE Interactions in Rain-Fed Durum Wheat Genotypes. J Agr Sci-Tarim Bili. 2019 Mar. 1;25(1):38-46. doi:10.15832/ankutbd.538993

Cited By

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