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İnsülin-benzeri Büyüme Faktörü Reseptör Tip 1 IGF1R Geninin Ekson 7 İçindeki Tek Nükleotid Polimorfizminin SNP Angus İneklerinin Büyüme Ölçütleri Üzerine Olan Etkileri

Year 2016, Volume: 22 Issue: 4, 492 - 499, 01.09.2016
https://doi.org/10.1501/Tarimbil_0000001407

Abstract

İnsülin benzeri büyüme faktörü-1 reseptör IGF1R sinyal yolu, doğum sonrası büyüme ve gelişmede önemli bir rol oynar. IGF1R tirozin kinaz reseptörü, IGF1R’nin otofosforilasyonunu tetikleyen IGF-I tarafından aktive edilen homodimerleri ve sonrasında meydana gelen aşağı sinyal transdüksiyonu oluşturmaktadır. Bu çalışmanın amacı, sığır IGF1R geni içinde bulunan ekzon 7 içindeki sessiz SNP rs41961336; CàT ile büyüme özellikleri arasındaki ilişkinin tanımlanması, karakterize edilmesi ve incelenmesidir. Dört farklı ırktan toplam 672 adet inek polimeraz zincir reaksiyonu-restriksiyon parça uzunluk polimorfizmi PCR-RFLP metodu kullanılarak genotiplenmiştir. Çalışılan tüm ırklar Polonya Holstein Friesian, Angus, Hereford, Limousine içinde, her üç genotip varlığı sadece Angus ırkında gözlenmiştir. CC genotipi araştırılan tüm ırklarda en sık gözlenen genotip olmuş 0.7987-0.9904 ve bunu CT genotipi takip etmiştir 0.00960.1946 . Sadece Angus inekleri ilişkilendirme analizleri için seçilmiştir. 210 günlük yaşa WWT210 düzeltilmiş sütten kesim ağırlığında, CC genotipli dişi buzağıların, CT genotipli bireylerden istatistiki olarak daha ağır oldukları +5.5 kg bulunmuştur P≤0.05 . Buna karşılık, CT genotipini taşıyan bireyler, ilk buzağılamada daha yüksek canlı ağırlık kazanmıştır +10.62 kg; P≤0.05 . Bu çalışma, IGF1R/TaiI polimorfizminin genotipleri ile doğum ağırlığı, günlük canlı ağırlık kazancı veya ilk buzağılama yaşı arasındaki ilişkiyi göstermede başarısız olmuştur

References

  • Blum J W, Elsasser T H, Greger D L, Wittenberg S, de Vries F & Distl O (2007). Insulin-like growth factor type-1 receptor down-regulation associated with dwarfism in Holstein calves. Domestic Animal Endocrinology 33: 245-268
  • Casas E, Shackelford S D, Keele J W, Koohmaraie M, Smith T P L & Stone R T (2003). Detection of quantitative trait loci for growth and carcass composition in cattle. Journal of Animal Science 81: 2976-2983
  • Casas E, Keele J W, Shackelford S D, Koohmaraie M T & Koohmaraie R T (2004). Stone identification of quantitative trait loci for growth and carcass composition in cattle. Animal Genetics 35: 2-6
  • Davis G P, Hetzel D J S, Corbet N J, Scacheri S, Lowden S, Renaud J, Mayne C, Stevenson R, Moore S S & Byrne K (1998). The mapping of QTL for birth weight in a tropical beef herd. Proceeding 6th World Congress on Genetics Applied to Livestock. Armidale NSW. Australia 26. pp. 441-444
  • Favelyukis S, Till J H, Hubbard S R & Miller W T (2001). Structure and autoregulation of the insulin-like growth factor 1 receptor kinase. Nature Structural Biology 8(12): 1058-1063
  • Fortes M R, Li Y, Collis E, Zhang Y & Hawken R J (2013). The IGF1 pathway genes and their association with age of puberty in cattle. Animal Genetics 44(1): 91-95
  • Humbel R E (1990). Insulin-like growth factors I and II. European Journal of Biochemistry 190: 445-462
  • Inagaki K, Tiulpakov A, Rubtsov P, Sverdlova P, Peterkova V, Yakar S, Terekhov S & LeRoith D (2007). A familial IGF-1 receptor mutant leads to short stature: Clinical and biochemical characterization. Journal of Clinical Endocrinology & Metabolism 92: 1542-1548
  • Keyhanfar M, Booker G W, Whittaker J, Wallace J C & Forbes B E (2007). Precise mapping of an IGF-I- binding site on the IGF-1R. Biochemical Journal 401: 269-277
  • Kim J J, Farnir F, Savell J & Taylor J F (2003). Detection of quantitative trait loci for growth and beef carcass fatness traits in a cross between Bos taurus (Angus) and Bos indicus (Brahman) cattle. Journal of Animal Science 81: 1933-1942
  • Le Roith D, Kavsan V M, Koval A P & Roberts C T Jr (1993). Phylogeny of the insulin-like growth factors (IGFs) and receptors: A molecular approach. Molecular Reproduction and Development 35: 332- 336
  • Liu J P, Baker J, Perkins A S, Robertson E J & Efstratiadis A (1993). Mice carrying null mutations of the genes encoding insulin-like growth factor I (Igf-1) and type 1 IGF receptor (Igf1r). Cell 75: 59-72
  • Micke G C, Sullivan T M, McMillen I C, Gentili S & Perry V E A (2011). Protein intake during gestation affects postnatal bovine skeletal muscle growth and relative expression of IGF1, IGF1R, IGF2 and IGF2R. Molecular and Cellular Endocrinology 332: 234-241
  • Moody D E, Pomp D & Barendse W (1996). Linkage mapping of the bovine insulin-like growth factor-1 receptor gene. Mammalian Genome 7: 168-169
  • Morris C A, Cullen N G, Pitchford W S, Hickey S M, Hyndman D L, Crawford A M & Bottema C D K (2003). QTL for birth weight in Bos taurus cattle. Association for the Advancement of Animal Breeding and Genetics Proceedings 15: 400-403
  • NCBI (2015). Database of single nucleotide polymorphisms (SNPs) and multiple small-scale variations that include insertions/deletions, microsatellites, and non- polymorphic variants (dbSNP). Retrieved in Juni, 29, 2015 from http://www.ncbi.nlm.nih.gov/snp/
  • Plath-Gabler A, Gabler C, Sinowatz F, Beriska B & Schams D (2001). The expression of the IGF family and GH receptor in the bovine mammary gland. Journal of Endocrinology 168: 39-48
  • Sell C, Dumenil G, Deveaud C, Miura M, Coppola D, DeAngelis T, Rubin R, Efstratiadis A & Baserga R (1994). Effect of a null mutation of the insulin- like growth factor I receptor gene on growth and transformation of mouse embryo fibroblasts. Molecular and Cellular Biology 14: 3604-3612
  • Shi J, Luo L, Eash J, Ibebunjo C & Glass D J (2011). The SCF-Fbxo40 complex induces IRS1 ubiquitination in skeletal muscle, limiting IGF1 signaling. Developmental Cell 21: 835-847
  • Ullrich A, Gray A, Tam A W, Yang-Feng T, Tsubokawa
  • Szewczuk M, Zych S, Wójcik J & Czerniawska- Piątkowska E (2013). Association of two SNPs in the coding region of the insulin-like growth factor 1 receptor (IGF1R) gene with growth-related traits in Angus cattle. Journal of Applied Genetics 54: 305- 308
  • Teglund S, McKay C, Schuetz E, Van Deursen J, Stravopodis D, Wang D, Brown M, Bodner S, Grosveld G & Ihle J N (1998). Stat5a and Stat5b proteins have essential and non-essential, or redundant, roles in cytokine responses. Cell 93: 841-850
  • Udy G B, Towers R P, Snell R G, Wilkins R J, Park S H, Ram P A, Waxman D J & Davey H W (1997). Requirement of STAT5b for sexual dimorphism of body growth rates and liver gene expression. Proceedings of the National Academy of Sciences of the United States of America 94: 7239-7244 M, Collins C, Henzel W, Le Bon T, Kathuria S, Chen E, Jacobs S, Francke U, Ramachandran J & Fujita- Yamaguchi Y (1986). Insulin-like growth factor I receptor primary structure: comparison with insulin receptor suggests structural determinants that define functional specificity. EMBO Journal 5: 2503-2512
  • Woelfle J, Chia D J & Rotwein P (2003). Mechanisms of growth hormone (GH) action. Identification of conserved Stat5 binding sites that mediate GH- induced insulin-like growth factor-I gene activation. Journal of Biological Chemistry 278: 51261-51266
  • Zhang R & Li X (2010). Association between IGF-IR, m-calpain and UCP-3 gene polymorphisms and growth traits in Nanyang cattle. Molecular Biology Reports 38(3): 2179-2184

Effects of SNP within Exon 7 of the Insulin-like Growth Factor Receptor Type 1 IGF1R Gene on Growth Traits in Angus Cows

Year 2016, Volume: 22 Issue: 4, 492 - 499, 01.09.2016
https://doi.org/10.1501/Tarimbil_0000001407

Abstract

Insulin-like growth factor 1 receptor IGF1R signaling pathway plays a key role in the postnatal growth and development. The tyrosine kinase receptor IGF1R forms homodimers that is activated by IGF-I which trigger autophosphorylation of IGF1R and subsequent downstream signal transduction. The objectives of this study were to identify, characterize and the examination of the association between silent SNP rs41961336; CàT within exon 7 of bovine IGF1R gene and growth traits. A total of 672 cows of four breeds was genotyped using the Polymerase Chain Reaction-Restriction Fragment Length Polymorphism PCR-RFLP method. A TaiI restriction endonuclease was used. Among all breeds under study Polish Holstein Friesian, Angus, Hereford, Limousine , the presence of all three genotypes was observed only for the Angus breed. The CC genotype was the most frequent in all investigated breeds 0.7987-0.9904 followed by CT 0.0096-0.1946 . Only Angus cows were selected for association analysis. At weaning weight adjusted to 210 days of age WWT210 , statistically significant differences P≤0.05 were shownfemale calves with the CC genotype were heavier +5.5 kg than the individuals with the CT genotype. However, individuals carrying the CT genotype had significantly higher body weight at first calving +10.62 kg; P≤0.05 . The present work failed to show association between genotypes of the IGF1R/TaiI polymorphism and BWT, ADG or age at first calving

References

  • Blum J W, Elsasser T H, Greger D L, Wittenberg S, de Vries F & Distl O (2007). Insulin-like growth factor type-1 receptor down-regulation associated with dwarfism in Holstein calves. Domestic Animal Endocrinology 33: 245-268
  • Casas E, Shackelford S D, Keele J W, Koohmaraie M, Smith T P L & Stone R T (2003). Detection of quantitative trait loci for growth and carcass composition in cattle. Journal of Animal Science 81: 2976-2983
  • Casas E, Keele J W, Shackelford S D, Koohmaraie M T & Koohmaraie R T (2004). Stone identification of quantitative trait loci for growth and carcass composition in cattle. Animal Genetics 35: 2-6
  • Davis G P, Hetzel D J S, Corbet N J, Scacheri S, Lowden S, Renaud J, Mayne C, Stevenson R, Moore S S & Byrne K (1998). The mapping of QTL for birth weight in a tropical beef herd. Proceeding 6th World Congress on Genetics Applied to Livestock. Armidale NSW. Australia 26. pp. 441-444
  • Favelyukis S, Till J H, Hubbard S R & Miller W T (2001). Structure and autoregulation of the insulin-like growth factor 1 receptor kinase. Nature Structural Biology 8(12): 1058-1063
  • Fortes M R, Li Y, Collis E, Zhang Y & Hawken R J (2013). The IGF1 pathway genes and their association with age of puberty in cattle. Animal Genetics 44(1): 91-95
  • Humbel R E (1990). Insulin-like growth factors I and II. European Journal of Biochemistry 190: 445-462
  • Inagaki K, Tiulpakov A, Rubtsov P, Sverdlova P, Peterkova V, Yakar S, Terekhov S & LeRoith D (2007). A familial IGF-1 receptor mutant leads to short stature: Clinical and biochemical characterization. Journal of Clinical Endocrinology & Metabolism 92: 1542-1548
  • Keyhanfar M, Booker G W, Whittaker J, Wallace J C & Forbes B E (2007). Precise mapping of an IGF-I- binding site on the IGF-1R. Biochemical Journal 401: 269-277
  • Kim J J, Farnir F, Savell J & Taylor J F (2003). Detection of quantitative trait loci for growth and beef carcass fatness traits in a cross between Bos taurus (Angus) and Bos indicus (Brahman) cattle. Journal of Animal Science 81: 1933-1942
  • Le Roith D, Kavsan V M, Koval A P & Roberts C T Jr (1993). Phylogeny of the insulin-like growth factors (IGFs) and receptors: A molecular approach. Molecular Reproduction and Development 35: 332- 336
  • Liu J P, Baker J, Perkins A S, Robertson E J & Efstratiadis A (1993). Mice carrying null mutations of the genes encoding insulin-like growth factor I (Igf-1) and type 1 IGF receptor (Igf1r). Cell 75: 59-72
  • Micke G C, Sullivan T M, McMillen I C, Gentili S & Perry V E A (2011). Protein intake during gestation affects postnatal bovine skeletal muscle growth and relative expression of IGF1, IGF1R, IGF2 and IGF2R. Molecular and Cellular Endocrinology 332: 234-241
  • Moody D E, Pomp D & Barendse W (1996). Linkage mapping of the bovine insulin-like growth factor-1 receptor gene. Mammalian Genome 7: 168-169
  • Morris C A, Cullen N G, Pitchford W S, Hickey S M, Hyndman D L, Crawford A M & Bottema C D K (2003). QTL for birth weight in Bos taurus cattle. Association for the Advancement of Animal Breeding and Genetics Proceedings 15: 400-403
  • NCBI (2015). Database of single nucleotide polymorphisms (SNPs) and multiple small-scale variations that include insertions/deletions, microsatellites, and non- polymorphic variants (dbSNP). Retrieved in Juni, 29, 2015 from http://www.ncbi.nlm.nih.gov/snp/
  • Plath-Gabler A, Gabler C, Sinowatz F, Beriska B & Schams D (2001). The expression of the IGF family and GH receptor in the bovine mammary gland. Journal of Endocrinology 168: 39-48
  • Sell C, Dumenil G, Deveaud C, Miura M, Coppola D, DeAngelis T, Rubin R, Efstratiadis A & Baserga R (1994). Effect of a null mutation of the insulin- like growth factor I receptor gene on growth and transformation of mouse embryo fibroblasts. Molecular and Cellular Biology 14: 3604-3612
  • Shi J, Luo L, Eash J, Ibebunjo C & Glass D J (2011). The SCF-Fbxo40 complex induces IRS1 ubiquitination in skeletal muscle, limiting IGF1 signaling. Developmental Cell 21: 835-847
  • Ullrich A, Gray A, Tam A W, Yang-Feng T, Tsubokawa
  • Szewczuk M, Zych S, Wójcik J & Czerniawska- Piątkowska E (2013). Association of two SNPs in the coding region of the insulin-like growth factor 1 receptor (IGF1R) gene with growth-related traits in Angus cattle. Journal of Applied Genetics 54: 305- 308
  • Teglund S, McKay C, Schuetz E, Van Deursen J, Stravopodis D, Wang D, Brown M, Bodner S, Grosveld G & Ihle J N (1998). Stat5a and Stat5b proteins have essential and non-essential, or redundant, roles in cytokine responses. Cell 93: 841-850
  • Udy G B, Towers R P, Snell R G, Wilkins R J, Park S H, Ram P A, Waxman D J & Davey H W (1997). Requirement of STAT5b for sexual dimorphism of body growth rates and liver gene expression. Proceedings of the National Academy of Sciences of the United States of America 94: 7239-7244 M, Collins C, Henzel W, Le Bon T, Kathuria S, Chen E, Jacobs S, Francke U, Ramachandran J & Fujita- Yamaguchi Y (1986). Insulin-like growth factor I receptor primary structure: comparison with insulin receptor suggests structural determinants that define functional specificity. EMBO Journal 5: 2503-2512
  • Woelfle J, Chia D J & Rotwein P (2003). Mechanisms of growth hormone (GH) action. Identification of conserved Stat5 binding sites that mediate GH- induced insulin-like growth factor-I gene activation. Journal of Biological Chemistry 278: 51261-51266
  • Zhang R & Li X (2010). Association between IGF-IR, m-calpain and UCP-3 gene polymorphisms and growth traits in Nanyang cattle. Molecular Biology Reports 38(3): 2179-2184
There are 25 citations in total.

Details

Primary Language Turkish
Journal Section Research Article
Authors

Małgorzata Szewczuk This is me

Publication Date September 1, 2016
Submission Date January 1, 2016
Published in Issue Year 2016 Volume: 22 Issue: 4

Cite

APA Szewczuk, M. (2016). İnsülin-benzeri Büyüme Faktörü Reseptör Tip 1 IGF1R Geninin Ekson 7 İçindeki Tek Nükleotid Polimorfizminin SNP Angus İneklerinin Büyüme Ölçütleri Üzerine Olan Etkileri. Journal of Agricultural Sciences, 22(4), 492-499. https://doi.org/10.1501/Tarimbil_0000001407

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