Research Article
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Year 2022, Volume: 8 Issue: 1, 54 - 62, 10.03.2022
https://doi.org/10.28979/jarnas.986661

Abstract

References

  • Al-Tarawneh, M. S. (2012). Lung cancer detection using image processing techniques. Leonardo Electronic Journal of Practices and Technologies, 11(21), 147-158. Retrieved from: http://lejpt.academicdirect.org/A20/147_158.pdf
  • Al-Hadidi, M. R., Alarabeyyat, A., & Alhanahnah, M. (2016). Breast cancer detection using k-nearest neighbor machine learning algorithm. Paper presented at the 2016 9th International Conference on Developments in eSystems Engineering (DeSE). (pp. 35-39). IEEE. doi: https://doi.org/10.1109/DeSE.2016.8
  • Badawy, S. M., Hefnawy, A. A., Zidan, H. E., & GadAllah, M. T. (2017). Breast cancer detection with mammogram segmentation: a qualitative study. International Journal of Advanced Computer Science Application, 8(10), 117-120. doi: https://doi.org/10.14569/IJACSA.2017.081016
  • Jian, T. X., Nazahah, M., Yusoff, M. M., & Shakir A. R. K. (2019). Segmentation of Irrelevant Regions Using Color Thresholding Method: Application in Breast Histopathology Images. Paper presented at the Journal of Physics: Conference Series. (pp. 1-5). doi: https://doi.org/10.1088/1742-6596/1372/1/012027
  • Joseph, R. P., Singh, C. S., & Manikandan, M. (2014). Brain tumor MRI image segmentation and detection in image processing. International Journal of Research in Engineering and Technology, 3(1), 1-5. doi: https://doi.org/10.15623/IJRET.2014.0313001
  • Kulkarni, D. A, Bhagyashree, S. M, & Udupi, G. R (2010). Texture Analysis of Mammographic images. International journal of computer applications, 5(6), 12-17. Retrieved from: https://www.ijcaonline.org/volume5/number6/pxc3871297.pdf
  • Kumar, A. S., Kumar, A., Bajaj, V., & Singh, G. K. (2018). Fractional-order darwinian swarm intelligence inspired multilevel thresholding for mammogram segmentation. Paper presented at the 2018 International Conference on Communication and Signal Processing (ICCSP). (pp. 0160-0164). IEEE. doi: https://doi.org/10.1109/ICCSP.2018.8524302
  • Liu, D., & Yu, J. (2009). Otsu method and K-means. Paper presented at the 2009 Ninth International Conference on Hybrid Intelligent Systems. (pp. 344-349). IEEE. doi: https://doi.org/10.1109/HIS.2009.74
  • Maolood, I. Y., Al-Salhi, Y. E. A., & Lu, S. (2018). Thresholding for medical image segmentation for cancer using fuzzy entropy with level set algorithm. Open Medicine, 13(1), 374-383. doi: https://doi.org/10.1515/med-2018-0056
  • Mapayi, T., Viriri, S., & Tapamo, J.-R. (2015). Adaptive thresholding technique for retinal vessel segmentation based on GLCM-energy information. Computational and mathematical methods in medicine, 2015. doi: http://dx.doi.org/10.1155/2015/597475
  • Mordvintsev, A., & Abid, K. (2017). OpenCV-Python Tutorials Documentation, Release 1. 2, 2018. Retrieved from: https://opencv24-python-tutorials.readthedocs.io/_/downloads/en/stable/pdf/
  • Polat, A., Hassan, S., Yildirim, I., Oliver, L. E., Mostafaei, M., Kumar, S., Maharjan, S., Bourguet, L., Cao, X., Ying, G., Hesar, M. E., & Zhang, Y. S. (2019). A miniaturized optical tomography platform for volumetric imaging of engineered living systems. Lab on a Chip, 19(4), 550-561. doi: https://doi.org/10.1039/C8LC01190G
  • Polat, A., Matela, N., Dinler, A., Zhang, Y. S., & Yildirim, I. (2019). Digital Breast Tomosynthesis imaging using compressed sensing based reconstruction for 10 radiation doses real data. Biomedical Signal Processing Control, 48, 26-34. doi: https://doi.org/10.1016/j.bspc.2018.08.036
  • Senthilkumaran, N., & Vaithegi, S. (2016). Image segmentation by using thresholding techniques for medical images. Computer Science Engineering: An International Journal, 6(1), 1-13. doi: https://doi.org/10.5121/cseij.2016.6101
  • Sujji, G. E., Lakshmi, Y. V. S., & Jiji, G. W. (2013). MRI brain image segmentation based on thresholding. International Journal of Advanced Computer Research, 3(1), 97-101. Retrieved from: https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.300.6479&rep=rep1&type=pdf
  • Waks, A. G., & Winer, E. P. (2019). Breast cancer treatment: A review. Jama, 321(3), 288-300. doi: https://doi.org/10.1001/jama.2018.19323
  • Yassin, N. I. R., Omran, S., El Houby, E. M. F., & Allam, H. (2018). Machine learning techniques for breast cancer computer aided diagnosis using different image modalities: A systematic review. Computer methods programs in biomedicine, 156, 25-45. doi: https://doi.org/10.1016/j.cmpb.2017.12.012

Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells

Year 2022, Volume: 8 Issue: 1, 54 - 62, 10.03.2022
https://doi.org/10.28979/jarnas.986661

Abstract

As in all cancer types, the early detection of breast cancer is vital in terms of patients holding on to life. Today, computer-aided image processing systems play an important role in the detection of diseases. Analyzing the images with accurate image processing methods is very important for professionals to interpret the images and to develop the treatment methods for diseases appropriately. The images contain-ing cancer cells (tumoroid) used in this study were obtained from the mini-Opto tomography device that creates 3D images by reconstruction of 2D images taken from different angles. It is an electronic, mechan-ical, and software-based device capable of 3D imaging of tumoroids up to 1 cm in diameter in size. Ob-serving an entire tumor spheroid that has the size of several centimeters in size in a single square image with a microscope is not possible, but with mini-Opto tomography it is possible. In our study, a few layers of 3D images of the tumoroid produced by MCF-7 breast cancer cells obtained on the different days from the mini-Opto device were used. Image thresholding offers many advantages at the segmenta-tion stage in order to distinguish the target objects. In this study, the determination of the most appropriate thresholding method for detecting the main tumor masses in the layered images was investigated. Moreo-ver, the contours of the tumoroid were determined in the original images based on applying the outcomes of thresholding. While various thresholding methods have been applied on diverse images in the literature, we have applied a few thresholding methods to small tumors up to 2 mm in size. As a result of the quali-tative assessment based on the results of the contour drawings on the thresholded images, the global thresholding and adaptive thresholding methods gave the best results.

References

  • Al-Tarawneh, M. S. (2012). Lung cancer detection using image processing techniques. Leonardo Electronic Journal of Practices and Technologies, 11(21), 147-158. Retrieved from: http://lejpt.academicdirect.org/A20/147_158.pdf
  • Al-Hadidi, M. R., Alarabeyyat, A., & Alhanahnah, M. (2016). Breast cancer detection using k-nearest neighbor machine learning algorithm. Paper presented at the 2016 9th International Conference on Developments in eSystems Engineering (DeSE). (pp. 35-39). IEEE. doi: https://doi.org/10.1109/DeSE.2016.8
  • Badawy, S. M., Hefnawy, A. A., Zidan, H. E., & GadAllah, M. T. (2017). Breast cancer detection with mammogram segmentation: a qualitative study. International Journal of Advanced Computer Science Application, 8(10), 117-120. doi: https://doi.org/10.14569/IJACSA.2017.081016
  • Jian, T. X., Nazahah, M., Yusoff, M. M., & Shakir A. R. K. (2019). Segmentation of Irrelevant Regions Using Color Thresholding Method: Application in Breast Histopathology Images. Paper presented at the Journal of Physics: Conference Series. (pp. 1-5). doi: https://doi.org/10.1088/1742-6596/1372/1/012027
  • Joseph, R. P., Singh, C. S., & Manikandan, M. (2014). Brain tumor MRI image segmentation and detection in image processing. International Journal of Research in Engineering and Technology, 3(1), 1-5. doi: https://doi.org/10.15623/IJRET.2014.0313001
  • Kulkarni, D. A, Bhagyashree, S. M, & Udupi, G. R (2010). Texture Analysis of Mammographic images. International journal of computer applications, 5(6), 12-17. Retrieved from: https://www.ijcaonline.org/volume5/number6/pxc3871297.pdf
  • Kumar, A. S., Kumar, A., Bajaj, V., & Singh, G. K. (2018). Fractional-order darwinian swarm intelligence inspired multilevel thresholding for mammogram segmentation. Paper presented at the 2018 International Conference on Communication and Signal Processing (ICCSP). (pp. 0160-0164). IEEE. doi: https://doi.org/10.1109/ICCSP.2018.8524302
  • Liu, D., & Yu, J. (2009). Otsu method and K-means. Paper presented at the 2009 Ninth International Conference on Hybrid Intelligent Systems. (pp. 344-349). IEEE. doi: https://doi.org/10.1109/HIS.2009.74
  • Maolood, I. Y., Al-Salhi, Y. E. A., & Lu, S. (2018). Thresholding for medical image segmentation for cancer using fuzzy entropy with level set algorithm. Open Medicine, 13(1), 374-383. doi: https://doi.org/10.1515/med-2018-0056
  • Mapayi, T., Viriri, S., & Tapamo, J.-R. (2015). Adaptive thresholding technique for retinal vessel segmentation based on GLCM-energy information. Computational and mathematical methods in medicine, 2015. doi: http://dx.doi.org/10.1155/2015/597475
  • Mordvintsev, A., & Abid, K. (2017). OpenCV-Python Tutorials Documentation, Release 1. 2, 2018. Retrieved from: https://opencv24-python-tutorials.readthedocs.io/_/downloads/en/stable/pdf/
  • Polat, A., Hassan, S., Yildirim, I., Oliver, L. E., Mostafaei, M., Kumar, S., Maharjan, S., Bourguet, L., Cao, X., Ying, G., Hesar, M. E., & Zhang, Y. S. (2019). A miniaturized optical tomography platform for volumetric imaging of engineered living systems. Lab on a Chip, 19(4), 550-561. doi: https://doi.org/10.1039/C8LC01190G
  • Polat, A., Matela, N., Dinler, A., Zhang, Y. S., & Yildirim, I. (2019). Digital Breast Tomosynthesis imaging using compressed sensing based reconstruction for 10 radiation doses real data. Biomedical Signal Processing Control, 48, 26-34. doi: https://doi.org/10.1016/j.bspc.2018.08.036
  • Senthilkumaran, N., & Vaithegi, S. (2016). Image segmentation by using thresholding techniques for medical images. Computer Science Engineering: An International Journal, 6(1), 1-13. doi: https://doi.org/10.5121/cseij.2016.6101
  • Sujji, G. E., Lakshmi, Y. V. S., & Jiji, G. W. (2013). MRI brain image segmentation based on thresholding. International Journal of Advanced Computer Research, 3(1), 97-101. Retrieved from: https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.300.6479&rep=rep1&type=pdf
  • Waks, A. G., & Winer, E. P. (2019). Breast cancer treatment: A review. Jama, 321(3), 288-300. doi: https://doi.org/10.1001/jama.2018.19323
  • Yassin, N. I. R., Omran, S., El Houby, E. M. F., & Allam, H. (2018). Machine learning techniques for breast cancer computer aided diagnosis using different image modalities: A systematic review. Computer methods programs in biomedicine, 156, 25-45. doi: https://doi.org/10.1016/j.cmpb.2017.12.012
There are 17 citations in total.

Details

Primary Language English
Subjects Electrical Engineering
Journal Section Research Article
Authors

Cihat Ediz Akbaba 0000-0003-1078-4382

Adem Polat 0000-0002-5662-4141

Early Pub Date March 10, 2022
Publication Date March 10, 2022
Submission Date August 24, 2021
Published in Issue Year 2022 Volume: 8 Issue: 1

Cite

APA Akbaba, C. E., & Polat, A. (2022). Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells. Journal of Advanced Research in Natural and Applied Sciences, 8(1), 54-62. https://doi.org/10.28979/jarnas.986661
AMA Akbaba CE, Polat A. Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells. JARNAS. March 2022;8(1):54-62. doi:10.28979/jarnas.986661
Chicago Akbaba, Cihat Ediz, and Adem Polat. “Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells”. Journal of Advanced Research in Natural and Applied Sciences 8, no. 1 (March 2022): 54-62. https://doi.org/10.28979/jarnas.986661.
EndNote Akbaba CE, Polat A (March 1, 2022) Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells. Journal of Advanced Research in Natural and Applied Sciences 8 1 54–62.
IEEE C. E. Akbaba and A. Polat, “Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells”, JARNAS, vol. 8, no. 1, pp. 54–62, 2022, doi: 10.28979/jarnas.986661.
ISNAD Akbaba, Cihat Ediz - Polat, Adem. “Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells”. Journal of Advanced Research in Natural and Applied Sciences 8/1 (March 2022), 54-62. https://doi.org/10.28979/jarnas.986661.
JAMA Akbaba CE, Polat A. Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells. JARNAS. 2022;8:54–62.
MLA Akbaba, Cihat Ediz and Adem Polat. “Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells”. Journal of Advanced Research in Natural and Applied Sciences, vol. 8, no. 1, 2022, pp. 54-62, doi:10.28979/jarnas.986661.
Vancouver Akbaba CE, Polat A. Determination of Appropriate Thresholding Method in Segmentation Stage in Detecting Breast Cancer Cells. JARNAS. 2022;8(1):54-62.


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