Research Article

Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption

Volume: 11 Number: 1 March 28, 2022
EN

Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption

Abstract

Disruption methods used to extract proteins from the cell often require optimization in terms of yield increase and molecular integrity according to the cell type. Most cell lysis methods primarily target the cell wall. However, even for the wall-deficient strains, efficient extraction of molecules in or attached to membranous structures is a delicate process. In this study, we optimized the protein extraction technique for a cell wall deficient strain of Chlamydomonas reinhardtii, which is also a preferred material for most of the recombinant protein production studies. Liquid nitrogen (LN) was evaluated for efficient protein extraction from wall-less strain. The results were compared with sonic treatments, which were optimized in terms of applied power and duration. The results showed that sonication at 25% power for 20 seconds of three rounds provided optimum results for the protein integrity and extraction yield (74.13±2 µg/mL and 185.32±5 mg/g). Although LN has provided similar results in terms of protein content compared to sonication, (70.15±4.43 µg/mL and 175.37±11.09 mg/g maximum), it revealed low efficiency in extracting intact proteins from sub-compartments of the cell.

Keywords

Thanks

The author thanks Elif İşel and Gülseren Özduman for their technical assistance during SDS PAGE analysis and fluorescence microscopy.

References

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Details

Primary Language

English

Subjects

Hydrobiology , Microbiology

Journal Section

Research Article

Publication Date

March 28, 2022

Submission Date

January 13, 2022

Acceptance Date

January 30, 2022

Published in Issue

Year 2022 Volume: 11 Number: 1

APA
Yıldırım, A. (2022). Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption. Marine Science and Technology Bulletin, 11(1), 32-40. https://doi.org/10.33714/masteb.1057346
AMA
1.Yıldırım A. Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption. Mar. Sci. Tech. Bull. 2022;11(1):32-40. doi:10.33714/masteb.1057346
Chicago
Yıldırım, Arzu. 2022. “Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas Reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption”. Marine Science and Technology Bulletin 11 (1): 32-40. https://doi.org/10.33714/masteb.1057346.
EndNote
Yıldırım A (March 1, 2022) Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption. Marine Science and Technology Bulletin 11 1 32–40.
IEEE
[1]A. Yıldırım, “Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption”, Mar. Sci. Tech. Bull., vol. 11, no. 1, pp. 32–40, Mar. 2022, doi: 10.33714/masteb.1057346.
ISNAD
Yıldırım, Arzu. “Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas Reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption”. Marine Science and Technology Bulletin 11/1 (March 1, 2022): 32-40. https://doi.org/10.33714/masteb.1057346.
JAMA
1.Yıldırım A. Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption. Mar. Sci. Tech. Bull. 2022;11:32–40.
MLA
Yıldırım, Arzu. “Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas Reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption”. Marine Science and Technology Bulletin, vol. 11, no. 1, Mar. 2022, pp. 32-40, doi:10.33714/masteb.1057346.
Vancouver
1.Arzu Yıldırım. Fine-Tuning of Protein Extraction From Wall-Deficient Chlamydomonas reinhardtii Using Liquid Nitrogen and Sonication-Assisted Cell Disruption. Mar. Sci. Tech. Bull. 2022 Mar. 1;11(1):32-40. doi:10.33714/masteb.1057346

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