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SDS-PAG Elektroforezinin Et ve Sakatat Analizinde Kullanılması

Year 2022, Issue: 4, 25 - 34, 30.09.2022

Abstract

Sodyum Dodesil sülfat poliakrilamid jel elektroforezi (SDS-PAGE), bir protein karışımının bileşenleri ayrı ayrı çözmek için en yaygın kullanılan analitik yöntemdir. Ayrıca bir proteinin saflığını elektroforetik bir yöntemle değerlendirmek neredeyse zorunlu hale gelmiştir. SDS-PAGE, proteinlerin moleküler boyuttaki farklılıkları ile jel matrisi boyunca %1' den daha az farklılık gösteren elektroforetik hareketliliklerini aynı anda kullanarak proteinleri birbirinden ayırır. Teknik aynı zamanda proteinlerin moleküler ağırlıklarını tahmin etme de güçlü bir araçtır.
Protein analizinde vazgeçilmez bir araç olarak SDS-PAGE'in başarısı, elektroforetik hareketliliğin bir proteinin moleküler kütlesi ile korelasyonuna izin vermektedir. Ve günümüzde başarılı bir SDS-PAGE analizi sadece ve sadece dikkatli numune hazırlama ve yüklemeden önce işlemlere bağlıdır.
Bu makalede en basit SDS-PAGE analizinin farklı et ve sakatat örneklerinin ayrımında kullanılabileceği anlatılmaktadır.

References

  • Referans1. Alamprese, C., Amigo, J. M., Casiraghi, E. ve Engelsen, S. B. (2016). Identification and quantification of turkey meat adulteration in fresh, frozen-thawed and cooked minced beef by FT-NIR spectroscopy and chemometrics. Meat Science, 121, 175-181. https://doi.org/10.1016/j.meatsci.2016.06.018
  • Referans2. Chrambach, A. ve Rodbard, D. (1971). Polyacrylamide gel electrophoresis. Science, 172(3982), 440-451. https://doi.org/10.1126/science.172.3982.440
  • Referans3. Dalsecco, L. S., Palhares, R. M., Oliveira, P. C., Teixeira, L. V., Drummond, M. G. ve De Oliveira, D. A. A. (2018). A fast and reliable real‐time PCR method for detection of ten animal species in meat products. Journal of Food Science, 83(2), 258-265. https://doi.org/10.1111/1750-3841.14001
  • Referans4. Davis, B. J. (1964). Method and application tohuman serum protein. Ann. NY Acad. Sci., 121(2), 404-427.
  • Referans5. Deniz, E., Güneş Altuntaş, E., Ayhan, B., İğci, N., Özel Demiralp, D. ve Candoğan, K. (2018). Differentiation of beef mixtures adulterated with chicken or turkey meat using FTIR spectroscopy. Journal of Food Processing and Preservation, 42(10), e13767. https://doi.org/10.1111/jfpp.13767
  • Referans6. Gecaj, R. M., Muji, S., Ajazi, F. C., Berisha, B., Kryeziu, A. ve Ismaili, M. (2021). Investigation of pork meat in chicken-and beef-based commercial products by ELISA and real-time PCR sold at retail in Kosovo. Czech Journal of Food Sciences, 39(5), 368-375. https://doi.org/10.17221/164/2020-CJFS
  • Referans7. Hassoun, A., Måge, I., Schmidt, W. F., Temiz, H. T., Li, L., Kim, H. -Y., Nilsen, H., Biancolillo, A., Kaddour, A. A., Sikorski, M., Sikorska, E., Grassi, S. ve Cozzolino, D. (2020). Fraud in animal origin food products: Advances in emerging spectroscopic detection methods over the past five years. Foods, 9(8), 1069. https://doi.org/10.3390/foods9081069
  • Referans8. Kim, M. J., Suh, S. M., Kim, S. Y., Qin, P., Kim, H. R. ve Kim, H. Y. (2020). Development of a real-time PCR assay for the detection of donkey (Equus asinus) meat in meat mixtures treated under different processing conditions. Foods, 9(2), 130. https://doi.org/10.3390/foods9020130
  • KReferans9. im, M., Yoo, I., Lee, S. -Y., Hong, Y. ve Kim, H. -Y. (2016). Quantitative detection of pork in commercial meat products by TaqMan® real-time PCR assay targeting the mitochondrial D-loop region. Food Chemistry, 210, 102-106. https://doi.org/10.1016/j.foodchem.2016.04.084
  • Referans10. Kuswandi, B., Cendekiawan, K. A., Kristiningrum, N. ve Ahmad, M. (2015). Pork adulteration in commercial meatballs determined by chemometric analysis of NIR Spectra. Journal of Food Measurement and Characterization, 9(3), 313-323. https://doi.org/10.1007/s11694-015-9238-3
  • Referans11. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227(5259), 680-685. https://doi.org/10.1038/227680a0
  • Referans12. Lowry, O. H. (1951). Rosebrough, NJ, Farr, AL, and Randall, RJ Protein measurement with the Folin phenol reagent. J. Biol. Chem, 193(1), 265-275.
  • Referans14. Luykx, D. M. A. M. ve Van Ruth, S. M. (2008). An overview of analytical methods for determining the geographical origin of food products. Food Chemistry, 107(2), 897-911. https://doi.org/10.1016/j.foodchem.2007.09.038
  • Referans15. Marshak, D. R., Kadonaga, J. T., Burgess, R. R., Knuth, M. W., Brennan, W. A. ve Lin, S. H. (1996). Strategies for protein purification and characterization: a laboratory course manual. Cold Spring Harbor Laboratory.
  • Referans16. Matsudaira, P. T. ve Burgess, D. R. (1978). SDS microslab linear gradient polyacrylamide gel electrophoresis. Analytical Biochemistry, 87(2), 386-396. https://doi.org/10.1016/0003-2697(78)90688-7
  • Referans17. Neville, D. M. ve Glossmann, H. (1974). Molecular weight determination of membrane protein and glycoprotein subunits by discontinuous gel electrophoresis in dodecyl sulfate. In Methods in Enzymology (Fleischer, S. ve Packer, L., Eds.), 32, 92-102. New York: Academic Press.
  • Referans18. Ornstein, L. (1964). Disc Electrophoresis - I Background and Theory. Annals of the New York Academy of Sciences, 121(2), 321-349. https://doi.org/10.1111/j.1749-6632.1964.tb14207.x
  • Referans19. Rady, A. ve Adedeji, A. (2018). Assessing different processed meats for adulterants using visible-near-infrared spectroscopy. Meat Science, 136, 59-67. https://doi.org/10.1016/j.meatsci.2017.10.014
  • Referans20. Reynolds, J. A. ve Tanford, C. (1970). Binding of dodecyl sulfate to proteins at high binding ratios. Possible implications for the state of proteins in biological membranes. Proceedings of the National Academy of Sciences, 66(3), 1002-1007. https://doi.org/10.1073/pnas.66.3.1002
  • Referans21. Ropodi, A. I., Panagou, E. Z. ve Nychas, G. -J. E. (2017). Multispectral imaging (MSI): A promising method for the detection of minced beef adulteration with horsemeat. Food Control, 73, 57-63. https://doi.org/10.1016/j.foodcont.2016.05.048
  • Referans22. Różycki, M., Chmurzyńska, E., Bilska-Zając, E., Karamon, J. ve Cencek, T. (2018). Isoelectric focusing of proteins in the pH gradient as a tool for identification of species origin of raw meat. Journal of Veterinary Research, 62(2), 151-159. https://doi.org/10.2478/jvetres-2018-0024
  • Referans23. Scopes, R. K. (1993). Protein purification: principles and practice. Springer Science & Business Media.
  • Referans24. Shapiro, A. L. ve Maizel, J. V. (1969). Molecular weight estimation of polypeptides by SDS polyacrylamide gel electrophoresis: further data concerning resolving power and general considerations. Analytical Biochemistry, 29(3), 505-514. https://doi.org/10.1016/0003-2697(69)90335-2
  • Referans25. Schägger, H. ve Von Jagow, G. (1987). Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Analytical Biochemistry, 166(2), 368-379. https://doi.org/10.1016/0003-2697(87)90587-2
  • Referans26. Spychaj, A. ve Mozdziak, P. E. (2009). PCR methods in meat species identification as a tool for the verification of regional and traditional meat products. Acta Scientiarum Polonorum Technologia Alimentaria, 8(2), 5-20.
  • Referans27. Weber, K., Pringle, J. R. ve Osborn, M. (1972). Measurement of molecular weights by electrophoresis on SDS-acrylamide gel. In Methods in Enzymology, 26, 3-27. Academic Press.
Year 2022, Issue: 4, 25 - 34, 30.09.2022

Abstract

References

  • Referans1. Alamprese, C., Amigo, J. M., Casiraghi, E. ve Engelsen, S. B. (2016). Identification and quantification of turkey meat adulteration in fresh, frozen-thawed and cooked minced beef by FT-NIR spectroscopy and chemometrics. Meat Science, 121, 175-181. https://doi.org/10.1016/j.meatsci.2016.06.018
  • Referans2. Chrambach, A. ve Rodbard, D. (1971). Polyacrylamide gel electrophoresis. Science, 172(3982), 440-451. https://doi.org/10.1126/science.172.3982.440
  • Referans3. Dalsecco, L. S., Palhares, R. M., Oliveira, P. C., Teixeira, L. V., Drummond, M. G. ve De Oliveira, D. A. A. (2018). A fast and reliable real‐time PCR method for detection of ten animal species in meat products. Journal of Food Science, 83(2), 258-265. https://doi.org/10.1111/1750-3841.14001
  • Referans4. Davis, B. J. (1964). Method and application tohuman serum protein. Ann. NY Acad. Sci., 121(2), 404-427.
  • Referans5. Deniz, E., Güneş Altuntaş, E., Ayhan, B., İğci, N., Özel Demiralp, D. ve Candoğan, K. (2018). Differentiation of beef mixtures adulterated with chicken or turkey meat using FTIR spectroscopy. Journal of Food Processing and Preservation, 42(10), e13767. https://doi.org/10.1111/jfpp.13767
  • Referans6. Gecaj, R. M., Muji, S., Ajazi, F. C., Berisha, B., Kryeziu, A. ve Ismaili, M. (2021). Investigation of pork meat in chicken-and beef-based commercial products by ELISA and real-time PCR sold at retail in Kosovo. Czech Journal of Food Sciences, 39(5), 368-375. https://doi.org/10.17221/164/2020-CJFS
  • Referans7. Hassoun, A., Måge, I., Schmidt, W. F., Temiz, H. T., Li, L., Kim, H. -Y., Nilsen, H., Biancolillo, A., Kaddour, A. A., Sikorski, M., Sikorska, E., Grassi, S. ve Cozzolino, D. (2020). Fraud in animal origin food products: Advances in emerging spectroscopic detection methods over the past five years. Foods, 9(8), 1069. https://doi.org/10.3390/foods9081069
  • Referans8. Kim, M. J., Suh, S. M., Kim, S. Y., Qin, P., Kim, H. R. ve Kim, H. Y. (2020). Development of a real-time PCR assay for the detection of donkey (Equus asinus) meat in meat mixtures treated under different processing conditions. Foods, 9(2), 130. https://doi.org/10.3390/foods9020130
  • KReferans9. im, M., Yoo, I., Lee, S. -Y., Hong, Y. ve Kim, H. -Y. (2016). Quantitative detection of pork in commercial meat products by TaqMan® real-time PCR assay targeting the mitochondrial D-loop region. Food Chemistry, 210, 102-106. https://doi.org/10.1016/j.foodchem.2016.04.084
  • Referans10. Kuswandi, B., Cendekiawan, K. A., Kristiningrum, N. ve Ahmad, M. (2015). Pork adulteration in commercial meatballs determined by chemometric analysis of NIR Spectra. Journal of Food Measurement and Characterization, 9(3), 313-323. https://doi.org/10.1007/s11694-015-9238-3
  • Referans11. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227(5259), 680-685. https://doi.org/10.1038/227680a0
  • Referans12. Lowry, O. H. (1951). Rosebrough, NJ, Farr, AL, and Randall, RJ Protein measurement with the Folin phenol reagent. J. Biol. Chem, 193(1), 265-275.
  • Referans14. Luykx, D. M. A. M. ve Van Ruth, S. M. (2008). An overview of analytical methods for determining the geographical origin of food products. Food Chemistry, 107(2), 897-911. https://doi.org/10.1016/j.foodchem.2007.09.038
  • Referans15. Marshak, D. R., Kadonaga, J. T., Burgess, R. R., Knuth, M. W., Brennan, W. A. ve Lin, S. H. (1996). Strategies for protein purification and characterization: a laboratory course manual. Cold Spring Harbor Laboratory.
  • Referans16. Matsudaira, P. T. ve Burgess, D. R. (1978). SDS microslab linear gradient polyacrylamide gel electrophoresis. Analytical Biochemistry, 87(2), 386-396. https://doi.org/10.1016/0003-2697(78)90688-7
  • Referans17. Neville, D. M. ve Glossmann, H. (1974). Molecular weight determination of membrane protein and glycoprotein subunits by discontinuous gel electrophoresis in dodecyl sulfate. In Methods in Enzymology (Fleischer, S. ve Packer, L., Eds.), 32, 92-102. New York: Academic Press.
  • Referans18. Ornstein, L. (1964). Disc Electrophoresis - I Background and Theory. Annals of the New York Academy of Sciences, 121(2), 321-349. https://doi.org/10.1111/j.1749-6632.1964.tb14207.x
  • Referans19. Rady, A. ve Adedeji, A. (2018). Assessing different processed meats for adulterants using visible-near-infrared spectroscopy. Meat Science, 136, 59-67. https://doi.org/10.1016/j.meatsci.2017.10.014
  • Referans20. Reynolds, J. A. ve Tanford, C. (1970). Binding of dodecyl sulfate to proteins at high binding ratios. Possible implications for the state of proteins in biological membranes. Proceedings of the National Academy of Sciences, 66(3), 1002-1007. https://doi.org/10.1073/pnas.66.3.1002
  • Referans21. Ropodi, A. I., Panagou, E. Z. ve Nychas, G. -J. E. (2017). Multispectral imaging (MSI): A promising method for the detection of minced beef adulteration with horsemeat. Food Control, 73, 57-63. https://doi.org/10.1016/j.foodcont.2016.05.048
  • Referans22. Różycki, M., Chmurzyńska, E., Bilska-Zając, E., Karamon, J. ve Cencek, T. (2018). Isoelectric focusing of proteins in the pH gradient as a tool for identification of species origin of raw meat. Journal of Veterinary Research, 62(2), 151-159. https://doi.org/10.2478/jvetres-2018-0024
  • Referans23. Scopes, R. K. (1993). Protein purification: principles and practice. Springer Science & Business Media.
  • Referans24. Shapiro, A. L. ve Maizel, J. V. (1969). Molecular weight estimation of polypeptides by SDS polyacrylamide gel electrophoresis: further data concerning resolving power and general considerations. Analytical Biochemistry, 29(3), 505-514. https://doi.org/10.1016/0003-2697(69)90335-2
  • Referans25. Schägger, H. ve Von Jagow, G. (1987). Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Analytical Biochemistry, 166(2), 368-379. https://doi.org/10.1016/0003-2697(87)90587-2
  • Referans26. Spychaj, A. ve Mozdziak, P. E. (2009). PCR methods in meat species identification as a tool for the verification of regional and traditional meat products. Acta Scientiarum Polonorum Technologia Alimentaria, 8(2), 5-20.
  • Referans27. Weber, K., Pringle, J. R. ve Osborn, M. (1972). Measurement of molecular weights by electrophoresis on SDS-acrylamide gel. In Methods in Enzymology, 26, 3-27. Academic Press.
There are 26 citations in total.

Details

Primary Language Turkish
Subjects Analytical Biochemistry, Food Engineering
Journal Section Araştırma Makaleleri
Authors

Özgür Kaynar 0000-0002-2875-423X

İsmail Erim Köseoğlu 0000-0001-7924-8209

Early Pub Date September 27, 2022
Publication Date September 30, 2022
Submission Date July 21, 2022
Published in Issue Year 2022 Issue: 4

Cite

APA Kaynar, Ö., & Köseoğlu, İ. E. (2022). SDS-PAG Elektroforezinin Et ve Sakatat Analizinde Kullanılması. Akademik Et Ve Süt Kurumu Dergisi(4), 25-34.