BibTex RIS Cite

A new lichen record for the Asia: Parmelia barrenoae Supported by Molecular Data from Turkey

Year 2018, Volume: 11 Issue: 3, 197 - 201, 15.12.2018

Abstract

Parmelia barrenoae is reported from Turkey and Asia for the first time. Comments on its habitats, substrata, distributional data and macrophoto are provided. In addition, a phylogenetic tree was constructed by comparing the sequence data of the ITS region of closely related species

References

  • Divakar, P. K., Molina, M. C., Lumbsch, H. T., Crespo, A. (2005). Parmelia barrenoae, a new lichen species related to Parmelia sulcata (Parmeliaceae) based on molecular and morphological data. The Lichenologist, 37(1), 37–46.
  • Gardes, M., Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology, 2, 113–118.
  • Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany, 33, 169–89.
  • Hodkinson, B. P., Lendemer, J. C., Esslinger T. L. (2010). Parmelia barrenoae, a macrolichen new to North America and Africa. North Amercian Fungi, 5, 1-5.
  • John, V. (1992). Flechten der Türkei I. Das die Türkei betreffende lichenologische Schrifttum. Pollichia, Bad Dürkheim, 1–14.
  • John, V. (1995). Flechten der Türkei IV. Erganzungen zum die Türkei betreffende lichenologische Schrifttum. Pollichia, Bad Dürkheim, 1–10.
  • John, V. (2007). Lichenological studies in Turkey and their relevance to environmental interpretation. Bocconea, 21, 85– 93.
  • John, V., Türk, A. (2017). Türkiye Likenleri Listesi. İstanbul: Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • Kocakaya, M., Halıcı, M. G., Aksoy, A. (2014). Lichenized and lichenicolous fungi of Gevne Valley (Konya, Antalya). Turkish Journal of Botany, 38, 358–369.
  • Kumar, S., Stecher, G., Tamura, K. (2016). MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870-1874.
  • Molina, M. C., Crespo, A., Blanco, O., Lumbsch, H. T., Hawksworth, D. L. (2004). Phylogenetic relationships and species concepts in Parmelia s. str. (Parmeliaceae) inferred from nuclear ITS rDNA and B-tubulin sequences. Lichenologist, 36, 37–54.
  • Ossowska, E., Kukwa, M. (2016). Parmelia barrenoae and P. pinnatifida, two lichen species new to Poland. Herzogia, 29, 198-203.
  • Özdemir Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation, 8, 146-156.
  • Purvis, O. W. (1992). Lichen Flora of Great Britain and Ireland. Natural History Museum Publications in association with the British Lichen Society.
  • Şenkardeşler, A. (2011). Das die Türkei betreffende lichenologische Schrittum için ek kayıtlar. Türk Liken Topluluğu Bülteni, 9, 9–10.
  • Tamura, K., Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution, 10, 512-526.
  • White, T. J., Bruns, T., Lee, S., Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: a guide to methods and applications (eds. Innis, M.A., Gelfand, D.H., Sninsky, J.J., White, T.J.). New York: Academic Press. 18(1), 315-322.

Asya için yeni bir liken kaydı: Türkiye'den moleküler veri ile desteklenen Parmelia barrenoae Divakar, M.C. Molina & A. Crespo

Year 2018, Volume: 11 Issue: 3, 197 - 201, 15.12.2018

Abstract

Parmelia barrenoae türü Türkiye ve Asya'dan ilk kez rapor edilmektedir. Türe ait habitat, substrat, dağılış ve makro fotoğraf verilmiştir. Buna ek olarak, yakın ilişkili türlerin ITS bölgelerine ait dizi analizleri ile karşılaştırılarak bir filogenetik ağaç oluşturulmuştur

References

  • Divakar, P. K., Molina, M. C., Lumbsch, H. T., Crespo, A. (2005). Parmelia barrenoae, a new lichen species related to Parmelia sulcata (Parmeliaceae) based on molecular and morphological data. The Lichenologist, 37(1), 37–46.
  • Gardes, M., Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology, 2, 113–118.
  • Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany, 33, 169–89.
  • Hodkinson, B. P., Lendemer, J. C., Esslinger T. L. (2010). Parmelia barrenoae, a macrolichen new to North America and Africa. North Amercian Fungi, 5, 1-5.
  • John, V. (1992). Flechten der Türkei I. Das die Türkei betreffende lichenologische Schrifttum. Pollichia, Bad Dürkheim, 1–14.
  • John, V. (1995). Flechten der Türkei IV. Erganzungen zum die Türkei betreffende lichenologische Schrifttum. Pollichia, Bad Dürkheim, 1–10.
  • John, V. (2007). Lichenological studies in Turkey and their relevance to environmental interpretation. Bocconea, 21, 85– 93.
  • John, V., Türk, A. (2017). Türkiye Likenleri Listesi. İstanbul: Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • Kocakaya, M., Halıcı, M. G., Aksoy, A. (2014). Lichenized and lichenicolous fungi of Gevne Valley (Konya, Antalya). Turkish Journal of Botany, 38, 358–369.
  • Kumar, S., Stecher, G., Tamura, K. (2016). MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870-1874.
  • Molina, M. C., Crespo, A., Blanco, O., Lumbsch, H. T., Hawksworth, D. L. (2004). Phylogenetic relationships and species concepts in Parmelia s. str. (Parmeliaceae) inferred from nuclear ITS rDNA and B-tubulin sequences. Lichenologist, 36, 37–54.
  • Ossowska, E., Kukwa, M. (2016). Parmelia barrenoae and P. pinnatifida, two lichen species new to Poland. Herzogia, 29, 198-203.
  • Özdemir Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation, 8, 146-156.
  • Purvis, O. W. (1992). Lichen Flora of Great Britain and Ireland. Natural History Museum Publications in association with the British Lichen Society.
  • Şenkardeşler, A. (2011). Das die Türkei betreffende lichenologische Schrittum için ek kayıtlar. Türk Liken Topluluğu Bülteni, 9, 9–10.
  • Tamura, K., Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution, 10, 512-526.
  • White, T. J., Bruns, T., Lee, S., Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: a guide to methods and applications (eds. Innis, M.A., Gelfand, D.H., Sninsky, J.J., White, T.J.). New York: Academic Press. 18(1), 315-322.
There are 17 citations in total.

Details

Primary Language Turkish
Journal Section Research Article
Authors

Mustafa Kocakaya This is me

Zekiye Kocakaya This is me

Duygu Kaya This is me

Mehmet Ünsal Barak This is me

Publication Date December 15, 2018
Published in Issue Year 2018 Volume: 11 Issue: 3

Cite

APA Kocakaya, M., Kocakaya, Z., Kaya, D., Barak, M. Ü. (2018). Asya için yeni bir liken kaydı: Türkiye’den moleküler veri ile desteklenen Parmelia barrenoae Divakar, M.C. Molina & A. Crespo. Biological Diversity and Conservation, 11(3), 197-201.

❖  Abstracted-Indexed in
Web of Science {Zoological Records Indexed] Clavariate Analytic, Medical Reads (RRS), CrossRef;10.46309/biodicon.

❖ Libraries
Aberystwyth University; All libraries; Bath University; Birmingham University; Cardiff University; City University London; CONSER (Not UK Holdings); Edinburgh University; Essex University; Exeter University; Eskişehir Technical University Library; EZB Electronic Journals Library; Feng Chia University Library; GAZİ Gazi University Library; Glasgow University; HEC-National Digital Library; Hull University; Imperial College London; Kaohsinug Medical University Library; ANKOS; Anadolu University Library; Lancaster University; Libros PDF; Liverpool University; London Metropolitan University; London School of Economics and Political Science; Manchester University; National Cheng Kung University Library; National ILAN University Library; Nottingham University; Open University; Oxford University; Queen Mary,University of London;Robert Gordon University; Royal Botanic Gardens, Kew; Sheffield Hallam University; Sheffield University; Shih Hsin University Library; Smithsonian Institution Libraries; Southampton University; Stirling University; Strathclyde University; Sussex University; The National Agricultural Library (NAL); The Ohio Library and Information NetWork; Trinity College Dublin; University of Washington Libraries; Vaughan Memorial Library; York University..

❖ The article processing is free.

❖ Web of Science-Clarivate Analytics, Zoological Record
❖ This journal is a CrossRef;10.46309/biodicon. member

❖ Please visit ” http:// www.biodicon.com“ ; "https://dergipark.org.tr/en/pub/biodicon"   for instructions about articles and all of the details about journal


❖  Correspondance Adres: Prof. Ersin YÜCEL, Sazova Mahallesi, Ziraat Caddesi, No.277 F Blok, 26005 Tepebaşı-Eskişehir/Türkiye
E-posta / E-mail: biodicon@gmail.com;
Web Address: http://www.biodicon.com;   https://dergipark.org.tr/en/pub/biodicon
❖ Biological Diversity and Conservation/ Biyolojik Çeşitlilik ve Koruma
❖ ISSN 1308-5301 Print; ISSN 1308-8084 Online
❖ Start Date Published 2008
© Copyright by Biological Diversity and Conservation/Biyolojik Çeşitlilik ve Koruma-Available online at www.biodicon.com/All rights reserved
Publisher : ERSİN YÜCEL (https://www.ersinyucel.com.tr/)
❖ This journal is published three numbers in a year. Printed in Eskişehir/Türkiye.
❖ All sorts of responsibilities of the articles published in this journal are belonging to the authors
Editör / Editor-In-Chief : Prof.Dr. Ersin YÜCEL, https://orcid.org/0000-0001-8274-7578