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Determination of grapevine stem fungal diseases in Malatya province

Year 2021, Volume: 61 Issue: 3, 42 - 50, 30.09.2021
https://doi.org/10.16955/bitkorb.891435

Abstract

Grapevine (Vitis vinifera L.) is one of the most prevalent and long-standing cultivated crops in the world due to its non-selective climate and soil demands, types of usage and having a wide range of varieties. Turkey has a rich grapevine gene pool because of its favorable climate zone. Viticulture, which has an important role in agriculture, faces many problems in the process of production to marketing. Fungal diseases take an important place by limiting the production wherever grapevine is cultivated. It is aimed to determine the stem fungal diseases that cause drying in viticulture areas of Malatya province with this research. Arapgir, Yesilyurt, Battalgazi and Darende districts of Malatya province, where grapevine is intensely cultivated, were surveyed in two different vegetation periods, and samples were taken from symptomatic plants. Identification of these isolates were performed based on morphological and molecular examinations. As a result of this study, Botryosphaeria spp., Phaeomoniella chlamydospora, Fomitiporia mediterranea, Cytospora viticola, Neoscytalidium dimidiatum, Dothiorella spp., Lasiodiplodia spp. were identified as causal agents for the diseases observed in Malatya province.

Supporting Institution

İnönü University research fund

Project Number

FYL-2018-1111

Thanks

This work is derived from the Msc Thesis named “Determination of Grapevine Stem Fungal Diseases in Malatya Province” and was supported by İnönü University research fund (Project number: FYL-2018-1111).

References

  • Akgül, D. S., Güngör Savaş, N., Özarslandan, M. 2019. First Report of Wood Canker Caused by Lasiodiplodia exigua and Neoscytalidium novaehollandiae on Grapevine in Turkey. Plant Disease, 103: 1036.
  • Anonymous, 2020. TUİK. https://biruni.tuik.gov.tr/ Date accessed: 03.03.2021
  • Bora, T. ve Karaca, İ. 1970. Kültür Bitkilerinde Hastalığın ve Zararın Ölçülmesi, Ege Üniversitesi. Zir. Fak., Yardımcı Ders Kitabı, Yayın No. 167, s. 43.
  • Cabaroğlu, T. 2015. Üzümün işlenmesi ve gıda sanayinde değerlendirilmesi. Türkiye 8. bağcılık ve teknolojileri sempozyumu, Selçuk Üniversitesi, 25-28 Eylül 2018, Konya.
  • Carbone, I. and Kohn, L. M. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553–556.
  • Crous, P. W. and Gams, W. 2000. Esspeces gen. et comb. nov., a causal organism of Petri grapevine decline and esca Phytopathol. Mediterr. 39: 112-118.
  • Crous, P.W., Gams, W., Wingfield, M.J. and van Wyk, P. S. 1996. Phaeoacremonium gen. nov. associated with wilt and decline diseases of woody hosts and human infections. Mycologia, 88, 786-796.
  • Dervis, S., Turkolmez, S., Ciftci, O., Ulubas, S. C. and Dikilitas, M. 2019. First report of Neoscytalidium dimidiatum causing canker, shoot blight, and root rot of pistachio in Turkey. Plant Disease 103:1411.
  • Dervis, S., Özer, G., Türkölmez, Ş. 2020. First report of Neoscytalidium novaehollandiae causing stem blight on tomato in Turkey. Journal of Plant Pathology. 102: 1339–1340.
  • Eskalen, A., and Gubler, W. D. 2001. Association of spores of Phaeomoniella chlamydospora, Phaeoacremonium inflatipes and Pm. aleophilum with grapevine cordons in California. Phytopathol. Mediterr. 40:S429-432.
  • Fischer, M. 2006. Biodiversity and geographic distribution of basidiomycetes causing esca-associated White rot in grapevine: a worldwide perspective. Phytopathologia mediterranea, 45:S30-S42.
  • Fischer, M., Schneider, P., Kraus, C., Molnar, M., Dubois, C., D’Agular, D. and Haag, N. 2016. Grapevine trunk disease in German viticulture: occurrence of leşse known fungi and first report of Phaeoacremonium viticola and P. fraxinopennsylvanicum. Phytopathologia Mediterranea, 55:145-156.
  • Glass, N. L. and Donaldson, C. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and environmental microbiology, 61:4, 1323-1330.
  • Göktaş, A. 2008. Üzüm yetiştiriciliği, Eğirdir Bahçe Kültürleri Araştırma Enstitüsü, Yayın No:18.
  • Gubler, W. D., Thind, T. S., Feliciano, A. J. and Eskalen, A. 2004. Pathogenicity of Phaeoacremonium aleophilum and Phaeomoniella chlamydospora on grape berries in California Phytopathologia Mediterranea, 43:1, 70-74.
  • Kiracı, M. A., Şenol, M. A. ve Kıran, T. 2015. Türkiye bağ alanı ve üzüm üretiminin gelişimi ve yapısal analizi. Türkiye 8. bağcılık ve teknolojileri sempozyumu, Selçuk Üniversitesi, 25-28 Eylül 2018, Konya.
  • Kumar, S., Stecher, G. and Tamura, K. 2016. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33:1870–1874.
  • Kurt, Ş., Uysal, A., Soylu, E., Kara, M. and Soylu, S. 2019. First record of Neoscytalidium novaehollandiae associated with pistachio dieback in the Southeastern Anatolia region of Turkey. Mycologia Iranica, 6(1), pp. 55-57.
  • Larignon, P. and Dubos, B. 1997. Fungi associated with esca disease in grapevine European Journal of Plant Pathology 103: 147−157.
  • Lawrence, D. P., Travadon, R., Pouzoulet, J., Rolshausen, P. E., Wilcox, W. F. and Baumgartner, K. 2017. Characterization of Cytospora isolates from wood cankers of declining grapevine in North America, with the descriptions of two new Cytospora species. Plant Pathology, 66:713-725.
  • Moreno-Sanz, P., Lucchetta, G., Zanzotto, A., Loureiro, M.D., Suarez, B. and Angelini, E. 2013. Fungi associated to grapevine trunk diseases in young plant in Asturias (Northern Spain) 40:3, 138-144.
  • Oksal, E., Çelik, Y. and Özer, G. 2020b. Neoscytalidium dimidiatum causes canker and dieback on grapevine in Turkey. Australasian Plant Disease Notes 14:33
  • Oksal, E. and Özer, G. 2021. First report of shoot blight and branch canker of Pyrus communis by Neoscytalidium novaehollandiae in Turkey. Journal of Plant Pathology.
  • Oksal, E., Yiğit, T. and Özer, G. 2020a. First report of Neoscytalidium dimidiatum causing shoot blight, dieback and canker of apricot in Turkey. Journal of Plant Pathology 102:579–580.
  • Ören, E., Koca, G., Gencer, R. and Bayraktar, H. 2020. First report of Neoscytalidium novaehollandiae associated with stem canker and branch dieback of almond trees. Australasian Plant Disease Notes 15:17.
  • Petit, E. and Gubler, W. D. 2005) Characterization of Cylindrocarpon species, the cause of black foot disease of grapevine in California. Plant Dis. 89:1051- 1059.
  • Rappaz, F. 1984. Les especes sanctionnecs du genre Eutypa (Diatrypaceae, Ascomycetes). Etude taxonomique et nomenclaturale. Mycotaxon, 20, 67-86.
  • Rolshausen, P. E., Akgül, D. S., Perez, R., Eskalen, A. and Gispert. C. 2013. First Report of Wood Canker Caused by Neoscytalidium dimidiatum on Grapevine in California. Plant Dis. Nov;97(11):1511.
  • Siebert, J. B. 2001. Eutypa: The economic toll on vineyards. Wines and Vines, 50- 56.
  • Tarımsal Araştırmalar ve Politikalar Genel Müdürlüğü. 2008. Zirai Mücadele Teknik Talimatları, Ankara.
  • Urbez-Torres, J. R., Hurdado, J., Bruez, E. and Gubler, W. 2010. Effect of temperature on conidial germination of Botryosphaeriaceae species infecting grapevines. Plant disease, 94:12, 1476-1484.
  • Van Coller, G.J., Denman, S., Lamprecht, S.C. and Crous, P.W. 2005. A new perspective of soilborne diseases of grapevines in nurseries. Winelands: 102- 105.
  • White, T. J., Bruns, T., Lee, S., Taylor, J. W. 1990. Amplification and direct sequencing of fungal ribosomal RNA gene for phylogenetics. PCR protocols: A guide to methods and applications. Academic Press inc, 315-322.
  • Woudenberg, J. H. C., Aveskamp, M. M., Gruyter, J., Spiers, A. G., Crous, P. W. 2009. Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype. National herbarium Nedherland & centralbureau vor schimmelcultures, 22:56-62.

Malatya ilinde asma gövde fungal hastalıklarının belirlenmesi

Year 2021, Volume: 61 Issue: 3, 42 - 50, 30.09.2021
https://doi.org/10.16955/bitkorb.891435

Abstract

İklim ve toprak istekleri yönünden çok seçici olmayışı, değerlendirme şekilleri ve çeşit açısından zengin olması nedeniyle asma (Vitis vinifera L.) dünyada en yaygın ve en eski kültür bitkilerinden biridir. Bağcılık için dünyanın en elverişli üretim alanlarından biri olan ülkemiz zengin asma gen potansiyeline sahiptir. Bitkisel üretimde önemli bir yere sahip olan bağcılık, günümüzde üretimden pazarlamaya kadar geçen süreç içerisinde bir çok sorunla karşı karşıyadır. Bu sorunlar içerisinde üretimi sınırlandıran fungal hastalıklar önemli yer tutmaktadır. Çalışmada Malatya ili bağ alanlarında kurumalara sebep olan gövde fungal etmenlerinin saptanması amaçlanmıştır. Bu amaçla Malatya ilinde bağcılığın yoğun olduğu Arapgir, Yeşilyurt, Battalgazi ve Darende ilçelerinde vejatasyon peryodu dikkate alınarak iki farklı dönemde örnekleme yapılmış ve hastalık belirtisi görülen bitkilerden numuneler alınmıştır. Hastalıklı bitki numunelerinden 290 adet fungal izolat elde edilmiştir. Fungal izolatların tanısı morfolojik özelliklerine ve moleküler yöntemlere göre yapılmıştır. Tanılama çalışmaları sonucunda Botryosphaeria spp., Phaeomoniella chlamydospora, Fomitiporia mediterranea, Cytospora viticola, Neoscytalidium dimidiatum, Dothiorella spp., Lasiodiplodia spp. hastalık etmenleri saptanmıştır.

Project Number

FYL-2018-1111

References

  • Akgül, D. S., Güngör Savaş, N., Özarslandan, M. 2019. First Report of Wood Canker Caused by Lasiodiplodia exigua and Neoscytalidium novaehollandiae on Grapevine in Turkey. Plant Disease, 103: 1036.
  • Anonymous, 2020. TUİK. https://biruni.tuik.gov.tr/ Date accessed: 03.03.2021
  • Bora, T. ve Karaca, İ. 1970. Kültür Bitkilerinde Hastalığın ve Zararın Ölçülmesi, Ege Üniversitesi. Zir. Fak., Yardımcı Ders Kitabı, Yayın No. 167, s. 43.
  • Cabaroğlu, T. 2015. Üzümün işlenmesi ve gıda sanayinde değerlendirilmesi. Türkiye 8. bağcılık ve teknolojileri sempozyumu, Selçuk Üniversitesi, 25-28 Eylül 2018, Konya.
  • Carbone, I. and Kohn, L. M. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553–556.
  • Crous, P. W. and Gams, W. 2000. Esspeces gen. et comb. nov., a causal organism of Petri grapevine decline and esca Phytopathol. Mediterr. 39: 112-118.
  • Crous, P.W., Gams, W., Wingfield, M.J. and van Wyk, P. S. 1996. Phaeoacremonium gen. nov. associated with wilt and decline diseases of woody hosts and human infections. Mycologia, 88, 786-796.
  • Dervis, S., Turkolmez, S., Ciftci, O., Ulubas, S. C. and Dikilitas, M. 2019. First report of Neoscytalidium dimidiatum causing canker, shoot blight, and root rot of pistachio in Turkey. Plant Disease 103:1411.
  • Dervis, S., Özer, G., Türkölmez, Ş. 2020. First report of Neoscytalidium novaehollandiae causing stem blight on tomato in Turkey. Journal of Plant Pathology. 102: 1339–1340.
  • Eskalen, A., and Gubler, W. D. 2001. Association of spores of Phaeomoniella chlamydospora, Phaeoacremonium inflatipes and Pm. aleophilum with grapevine cordons in California. Phytopathol. Mediterr. 40:S429-432.
  • Fischer, M. 2006. Biodiversity and geographic distribution of basidiomycetes causing esca-associated White rot in grapevine: a worldwide perspective. Phytopathologia mediterranea, 45:S30-S42.
  • Fischer, M., Schneider, P., Kraus, C., Molnar, M., Dubois, C., D’Agular, D. and Haag, N. 2016. Grapevine trunk disease in German viticulture: occurrence of leşse known fungi and first report of Phaeoacremonium viticola and P. fraxinopennsylvanicum. Phytopathologia Mediterranea, 55:145-156.
  • Glass, N. L. and Donaldson, C. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and environmental microbiology, 61:4, 1323-1330.
  • Göktaş, A. 2008. Üzüm yetiştiriciliği, Eğirdir Bahçe Kültürleri Araştırma Enstitüsü, Yayın No:18.
  • Gubler, W. D., Thind, T. S., Feliciano, A. J. and Eskalen, A. 2004. Pathogenicity of Phaeoacremonium aleophilum and Phaeomoniella chlamydospora on grape berries in California Phytopathologia Mediterranea, 43:1, 70-74.
  • Kiracı, M. A., Şenol, M. A. ve Kıran, T. 2015. Türkiye bağ alanı ve üzüm üretiminin gelişimi ve yapısal analizi. Türkiye 8. bağcılık ve teknolojileri sempozyumu, Selçuk Üniversitesi, 25-28 Eylül 2018, Konya.
  • Kumar, S., Stecher, G. and Tamura, K. 2016. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33:1870–1874.
  • Kurt, Ş., Uysal, A., Soylu, E., Kara, M. and Soylu, S. 2019. First record of Neoscytalidium novaehollandiae associated with pistachio dieback in the Southeastern Anatolia region of Turkey. Mycologia Iranica, 6(1), pp. 55-57.
  • Larignon, P. and Dubos, B. 1997. Fungi associated with esca disease in grapevine European Journal of Plant Pathology 103: 147−157.
  • Lawrence, D. P., Travadon, R., Pouzoulet, J., Rolshausen, P. E., Wilcox, W. F. and Baumgartner, K. 2017. Characterization of Cytospora isolates from wood cankers of declining grapevine in North America, with the descriptions of two new Cytospora species. Plant Pathology, 66:713-725.
  • Moreno-Sanz, P., Lucchetta, G., Zanzotto, A., Loureiro, M.D., Suarez, B. and Angelini, E. 2013. Fungi associated to grapevine trunk diseases in young plant in Asturias (Northern Spain) 40:3, 138-144.
  • Oksal, E., Çelik, Y. and Özer, G. 2020b. Neoscytalidium dimidiatum causes canker and dieback on grapevine in Turkey. Australasian Plant Disease Notes 14:33
  • Oksal, E. and Özer, G. 2021. First report of shoot blight and branch canker of Pyrus communis by Neoscytalidium novaehollandiae in Turkey. Journal of Plant Pathology.
  • Oksal, E., Yiğit, T. and Özer, G. 2020a. First report of Neoscytalidium dimidiatum causing shoot blight, dieback and canker of apricot in Turkey. Journal of Plant Pathology 102:579–580.
  • Ören, E., Koca, G., Gencer, R. and Bayraktar, H. 2020. First report of Neoscytalidium novaehollandiae associated with stem canker and branch dieback of almond trees. Australasian Plant Disease Notes 15:17.
  • Petit, E. and Gubler, W. D. 2005) Characterization of Cylindrocarpon species, the cause of black foot disease of grapevine in California. Plant Dis. 89:1051- 1059.
  • Rappaz, F. 1984. Les especes sanctionnecs du genre Eutypa (Diatrypaceae, Ascomycetes). Etude taxonomique et nomenclaturale. Mycotaxon, 20, 67-86.
  • Rolshausen, P. E., Akgül, D. S., Perez, R., Eskalen, A. and Gispert. C. 2013. First Report of Wood Canker Caused by Neoscytalidium dimidiatum on Grapevine in California. Plant Dis. Nov;97(11):1511.
  • Siebert, J. B. 2001. Eutypa: The economic toll on vineyards. Wines and Vines, 50- 56.
  • Tarımsal Araştırmalar ve Politikalar Genel Müdürlüğü. 2008. Zirai Mücadele Teknik Talimatları, Ankara.
  • Urbez-Torres, J. R., Hurdado, J., Bruez, E. and Gubler, W. 2010. Effect of temperature on conidial germination of Botryosphaeriaceae species infecting grapevines. Plant disease, 94:12, 1476-1484.
  • Van Coller, G.J., Denman, S., Lamprecht, S.C. and Crous, P.W. 2005. A new perspective of soilborne diseases of grapevines in nurseries. Winelands: 102- 105.
  • White, T. J., Bruns, T., Lee, S., Taylor, J. W. 1990. Amplification and direct sequencing of fungal ribosomal RNA gene for phylogenetics. PCR protocols: A guide to methods and applications. Academic Press inc, 315-322.
  • Woudenberg, J. H. C., Aveskamp, M. M., Gruyter, J., Spiers, A. G., Crous, P. W. 2009. Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype. National herbarium Nedherland & centralbureau vor schimmelcultures, 22:56-62.
There are 34 citations in total.

Details

Primary Language English
Journal Section Makaleler
Authors

Erçin Oksal 0000-0002-7049-4419

Yusuf Çelik This is me 0000-0001-5598-3559

Project Number FYL-2018-1111
Publication Date September 30, 2021
Submission Date March 4, 2021
Acceptance Date March 26, 2021
Published in Issue Year 2021 Volume: 61 Issue: 3

Cite

APA Oksal, E., & Çelik, Y. (2021). Determination of grapevine stem fungal diseases in Malatya province. Plant Protection Bulletin, 61(3), 42-50. https://doi.org/10.16955/bitkorb.891435
AMA Oksal E, Çelik Y. Determination of grapevine stem fungal diseases in Malatya province. Plant Protection Bulletin. September 2021;61(3):42-50. doi:10.16955/bitkorb.891435
Chicago Oksal, Erçin, and Yusuf Çelik. “Determination of Grapevine Stem Fungal Diseases in Malatya Province”. Plant Protection Bulletin 61, no. 3 (September 2021): 42-50. https://doi.org/10.16955/bitkorb.891435.
EndNote Oksal E, Çelik Y (September 1, 2021) Determination of grapevine stem fungal diseases in Malatya province. Plant Protection Bulletin 61 3 42–50.
IEEE E. Oksal and Y. Çelik, “Determination of grapevine stem fungal diseases in Malatya province”, Plant Protection Bulletin, vol. 61, no. 3, pp. 42–50, 2021, doi: 10.16955/bitkorb.891435.
ISNAD Oksal, Erçin - Çelik, Yusuf. “Determination of Grapevine Stem Fungal Diseases in Malatya Province”. Plant Protection Bulletin 61/3 (September 2021), 42-50. https://doi.org/10.16955/bitkorb.891435.
JAMA Oksal E, Çelik Y. Determination of grapevine stem fungal diseases in Malatya province. Plant Protection Bulletin. 2021;61:42–50.
MLA Oksal, Erçin and Yusuf Çelik. “Determination of Grapevine Stem Fungal Diseases in Malatya Province”. Plant Protection Bulletin, vol. 61, no. 3, 2021, pp. 42-50, doi:10.16955/bitkorb.891435.
Vancouver Oksal E, Çelik Y. Determination of grapevine stem fungal diseases in Malatya province. Plant Protection Bulletin. 2021;61(3):42-50.

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