Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi

Volume: 2 Number: 4 December 11, 2015
  • Yasemin Baskın
  • Türkan Yiğitbaşı
  • Murat Kemal Atahan
  • Hasan Küpeli
  • Seyran Yiğit
  • Ercüment Tarcan
EN TR

Abstract

Objective: Surface-enhanced laser desorption/ionization time-of flight mass spectrometry (SELDI-TOF MS) was used to screen serum proteomic profiling to identify protein markers for early breast cancer patients. Methods: We used metal ion affinity chromatography (IMAC30-Cu) for serum proteome fractionation technique and identify differentially expressed peptides (m/z; P < 0.0001) from benign disease and healthy controls as potential biomarkers of early breast cancer. The mass spectra, analyzed using ProteinChip Data Manager Software, distinguished between patients and healthy individuals based on k-nearest neighbor genetic algorithm. We collected 70 serum samples from patients with breast cancer (62 invasive breast carcinoma; 8 ductal carcinoma in situ), 31 bening disease and 37 healthy individuals. Results: Forty two peaks showed statistically significantly different intensities between cases and controls (P<0.05); 10 protein peaks were differentially expressed between the patients and benign disease. These results indicate that there are differences in serum protein expression among the three different groups of patients. Conclusion: SELDI-TOF MS could be used to screen blood samples for the early detection of breast cancer patients. Serum proteomic profiling by SELDI-TOF MS is a novel potential tool for the clinical diagnosis of patients with breast carcinoma.

Keywords

References

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Details

Primary Language

English

Subjects

-

Journal Section

-

Authors

Yasemin Baskın This is me

Türkan Yiğitbaşı This is me
Medipol Üniversitesi, Tıp Fakültesi, Biyokimya A.D

Murat Kemal Atahan This is me
Atatürk Eğitim ve Araştırma Hastanesi, 1. Cerrahi Kliniği, İzmir, Türkiye

Hasan Küpeli This is me
Atatürk Eğitim ve Araştırma Hastanesi, 1. Cerrahi Kliniği, İzmir, Türkiye

Seyran Yiğit This is me

Ercüment Tarcan This is me
Atatürk Eğitim ve Araştırma Hastanesi, 1. Cerrahi Kliniği, İzmir, Türkiye

Publication Date

December 11, 2015

Submission Date

July 11, 2016

Acceptance Date

-

Published in Issue

Year 2015 Volume: 2 Number: 4

APA
Baskın, Y., Yiğitbaşı, T., Atahan, M. K., Küpeli, H., Yiğit, S., & Tarcan, E. (2015). Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal, 2(4), 101-105. https://izlik.org/JA93HM76XW
AMA
1.Baskın Y, Yiğitbaşı T, Atahan MK, Küpeli H, Yiğit S, Tarcan E. Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal. 2015;2(4):101-105. https://izlik.org/JA93HM76XW
Chicago
Baskın, Yasemin, Türkan Yiğitbaşı, Murat Kemal Atahan, Hasan Küpeli, Seyran Yiğit, and Ercüment Tarcan. 2015. “Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) Ile Belirlenmesi”. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal 2 (4): 101-5. https://izlik.org/JA93HM76XW.
EndNote
Baskın Y, Yiğitbaşı T, Atahan MK, Küpeli H, Yiğit S, Tarcan E (December 1, 2015) Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal 2 4 101–105.
IEEE
[1]Y. Baskın, T. Yiğitbaşı, M. K. Atahan, H. Küpeli, S. Yiğit, and E. Tarcan, “Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi”, CBU-SBED: Celal Bayar University-Health Sciences Institute Journal, vol. 2, no. 4, pp. 101–105, Dec. 2015, [Online]. Available: https://izlik.org/JA93HM76XW
ISNAD
Baskın, Yasemin - Yiğitbaşı, Türkan - Atahan, Murat Kemal - Küpeli, Hasan - Yiğit, Seyran - Tarcan, Ercüment. “Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) Ile Belirlenmesi”. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal 2/4 (December 1, 2015): 101-105. https://izlik.org/JA93HM76XW.
JAMA
1.Baskın Y, Yiğitbaşı T, Atahan MK, Küpeli H, Yiğit S, Tarcan E. Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal. 2015;2:101–105.
MLA
Baskın, Yasemin, et al. “Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) Ile Belirlenmesi”. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal, vol. 2, no. 4, Dec. 2015, pp. 101-5, https://izlik.org/JA93HM76XW.
Vancouver
1.Yasemin Baskın, Türkan Yiğitbaşı, Murat Kemal Atahan, Hasan Küpeli, Seyran Yiğit, Ercüment Tarcan. Meme Kanseri Proteom Profilinin Yüzey Geliştirilmiş Lazer Desorpsiyon / İyonizasyon Uçuş Kütle Spektrometrisi (SELDI-TOF MS) ile Belirlenmesi. CBU-SBED: Celal Bayar University-Health Sciences Institute Journal [Internet]. 2015 Dec. 1;2(4):101-5. Available from: https://izlik.org/JA93HM76XW