Research Article

Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization

Volume: 14 Number: 1 June 29, 2026
TR EN

Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization

Abstract

Accurate verification of farmer-declared crop types is essential for the reliable administration of agricultural subsidy programs. In Turkey, parcel-level crop declarations submitted through the Farmer Registration System (FRS/ÇKS) are not subject to systematic field-level verification, introducing structural label noise into deep learning models that rely on these declarations as training supervision. This study presents a deep learning-based crop classification and risk assessment framework applied to 15,000 agricultural parcels in the Biga district of Çanakkale province, Turkey, using Sentinel-2 multi-temporal imagery to validate FRS/ÇKS declarations. The study advances the state of the art along two axes: (i) the first application of Symmetric Cross Entropy (SCE) loss to remote sensing-based parcel classification, and (ii) the integration of classification outputs into a parcel-level risk scoring framework for field verification prioritization. LSTM and 1D CNN-LSTM architectures were comparatively evaluated under both standard Categorical Cross Entropy (CCE) and SCE loss functions. Weekly median composites comprising 14 features — ten Sentinel-2 spectral bands together with NDVI, EVI, NDRE, and LAI vegetation indices — were used as input across 30 temporal steps. The highest performance was achieved by the 1D CNN-LSTM + SCE configuration (Macro F1: 0.741; OA: 86.5%). SCE yielded decisive improvements for minority classes: tomato precision increased from 0.16 to 0.70, and pepper precision from 0.41 to 0.76. The risk scoring mechanism flagged 1,738 of 15,000 parcels (11.6%) as high-risk, enabling an 8.6× more efficient allocation of field inspection resources. Geographic clustering analysis revealed discrepancy rates reaching 48% in certain villages. These findings demonstrate that, in agricultural classification problems with structural label noise, loss function selection can be more determinative than architectural choice.

Keywords

References

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Details

Primary Language

English

Subjects

Precision Agriculture Technologies, Agriculture, Land and Farm Management (Other)

Journal Section

Research Article

Publication Date

June 29, 2026

Submission Date

April 24, 2026

Acceptance Date

June 19, 2026

Published in Issue

Year 2026 Volume: 14 Number: 1

APA
Adanalı, A. S., & Çiçek, G. (2026). Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization. ÇOMÜ Ziraat Fakültesi Dergisi, 14(1), 128-141. https://doi.org/10.33202/comuagri.1937201
AMA
1.Adanalı AS, Çiçek G. Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization. COMU J. Agri. Fac. 2026;14(1):128-141. doi:10.33202/comuagri.1937201
Chicago
Adanalı, Ali Sinan, and Gıyasettin Çiçek. 2026. “Deep Learning-Based Crop Declaration Validation With Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization”. ÇOMÜ Ziraat Fakültesi Dergisi 14 (1): 128-41. https://doi.org/10.33202/comuagri.1937201.
EndNote
Adanalı AS, Çiçek G (June 1, 2026) Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization. ÇOMÜ Ziraat Fakültesi Dergisi 14 1 128–141.
IEEE
[1]A. S. Adanalı and G. Çiçek, “Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization”, COMU J. Agri. Fac., vol. 14, no. 1, pp. 128–141, June 2026, doi: 10.33202/comuagri.1937201.
ISNAD
Adanalı, Ali Sinan - Çiçek, Gıyasettin. “Deep Learning-Based Crop Declaration Validation With Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization”. ÇOMÜ Ziraat Fakültesi Dergisi 14/1 (June 1, 2026): 128-141. https://doi.org/10.33202/comuagri.1937201.
JAMA
1.Adanalı AS, Çiçek G. Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization. COMU J. Agri. Fac. 2026;14:128–141.
MLA
Adanalı, Ali Sinan, and Gıyasettin Çiçek. “Deep Learning-Based Crop Declaration Validation With Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization”. ÇOMÜ Ziraat Fakültesi Dergisi, vol. 14, no. 1, June 2026, pp. 128-41, doi:10.33202/comuagri.1937201.
Vancouver
1.Ali Sinan Adanalı, Gıyasettin Çiçek. Deep Learning-Based Crop Declaration Validation with Noisy Labels: A Comparative Study of Loss Functions and Architectures for Parcel-Level Risk Prioritization. COMU J. Agri. Fac. 2026 Jun. 1;14(1):128-41. doi:10.33202/comuagri.1937201