Research Article

LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions

Volume: 8 Number: 2 December 30, 2025
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LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions

Abstract

There is a significant need for environmentally friendly organic pesticides. This study was conducted to analyze the content of ethanol extracts from some naturally occurring plant parts in Elazığ, Türkiye, using LC-MS/MS and to determine their activity against certain plant pathogenic bacteria and microfungi. The study was carried out under in vitro conditions using a Randomized Complete Block Design with four replications. Antibacterial activity was assessed using the Agar Well Diffusion Method in Mueller-Hinton medium, while antifungal activity was determined using the Poisoned Food Method in Malt Extract Agar medium. The statistical analysis of the obtained data sets was performed using the Kruskal-Wallis H test. As a result, among the 33 standard compounds investigated in the extracts, none were found in Asphodelus aestivus L. and Melissa officinalis; three compounds vanillin, gentisic acid, chlorogenic acid) were identified in Tanacetum parthenium; and four compounds vanillin, trans-cinnamic acid, p-coumaric acid, hydroxybenzaldehyde) were identified in Rosa canina L. Rosa canina L. extract showed no activity against the pathogenic test microfungi, while the activity of Tanacetum parthenium extract increased with higher concentrations. It was observed that the extracts of Asphodelus aestivus L. and Melissa officinalis completely inhibited the growth of microfungi at concentrations of 15% and above(v/v).

Keywords

Antimicrobial activity, Bioactive compounds, Biopesticide, Fusarium oxysporum, Verticillium dahliae

Ethical Statement

The authors declare that they have no conflict of interest.

References

  1. Abdel-Naime, W. A., Fahim, J. R., Fouad, M. A., Kamel, M. S. (2019). Antibacterial, antifungal, and GC–MS studies of Melissa officinalis. South African Journal of Botany, 124, 228-234. https://doi.org/10.1016/j.sajb.2019.05.011
  2. Abdellatif, F., Boudjella, H., Zitouni, A., Hassani, A. (2014). Chemical composition and antimicrobial activity of the essential oil from leaves of Algerian Melissa officinalis L. EXCLI journal, 13, 772.
  3. Alizadeh Behbahani, B., Shahidi, F. (2019). Melissa officinalis essential oil: Chemical compositions, antioxidant potential, total phenolic content and antimicrobial activity. Nutrition and Food Sciences Research, 6(1), 17-25.
  4. Anand, G., Rajeshkumar, K. C. (2022). Challenges and threats posed by plant pathogenic fungi on agricultural productivity and economy. In Fungal diversity, ecology and control management (pp. 483-493). Singapore: Springer Nature Singapore.
  5. Anonymous. 2019. Mcfarland standard for in vitro use only Dalyn Biologicals, Catalogue No. TM50-TM60, http://www.dalynn.com/dyn/ck_assets/files/tech/TM53.pdf, (Access date: May 10, 2019).
  6. Arora S, Sahni D, (2016). Pesticides effect on soil microbial ecology and enzyme activity-an overview. Journal of Applied and Natural Science, 8(2), 1126-1132.
  7. Atalar, M. N., Aras, A., Türkan, F., Barlak, N., Yildiko, Ü., Karatas, O. F., Alma, M. H. (2021). The effects of Daucus carota extract against PC3, PNT1a prostate cells, acetylcholinesterase, glutathione S‐transferase, and α‐glycosidase; an in vitro–in silico study. Journal of Food Biochemistry, 45(12). e13975. https://doi.org/10.1111/jfbc.13975
  8. Balouiri, M., Sadiki, M., Ibnsouda, S. K. (2016). Methods for in vitro evaluating antimicrobial activity: A review. Journal of Pharmaceutical Analysis, 6(2), 71-79. https://doi.org/10.1016/j.jpha.2015.11.005
  9. Bandi, N., Sarvepalli, R., Venugopalaiah, P. (2025). Review on Tanacetum parthenium. International Journal of Indigenous Herbs and Drugs, 7-13. https://doi.org/10.46956/ijihd.v10i1.674
  10. Buttimer, C., McAuliffe, O., Ross, R. P., Hill, C., O’Mahony, J., Coffey, A. (2017). Bacteriophages and bacterial plant diseases. Frontiers in microbiology, 8, 34.
APA
Öğün, E., Koç, İ., Güral, Y., Aydoğmuş, E., & Özgen, İ. (2025). LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions. Doğu Fen Bilimleri Dergisi, 8(2), 99-114. https://doi.org/10.57244/dfbd.1726117
AMA
1.Öğün E, Koç İ, Güral Y, Aydoğmuş E, Özgen İ. LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions. Doğu Fen Bilimleri Dergisi. 2025;8(2):99-114. doi:10.57244/dfbd.1726117
Chicago
Öğün, Erdal, İbrahim Koç, Yunus Güral, Ercan Aydoğmuş, and İnanç Özgen. 2025. “LC-MS/MS/Content/Analysis/of/Ethanol/Extracts/from/Some/Naturally/Occurring/Plants/and/Their/Biological/Activity/Against/Certain/Plant/Pathogenic/Microorganisms/Under/In/Vitro/Conditions”. Doğu Fen Bilimleri Dergisi 8 (2): 99-114. https://doi.org/10.57244/dfbd.1726117.
EndNote
Öğün E, Koç İ, Güral Y, Aydoğmuş E, Özgen İ (December 1, 2025) LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions. Doğu Fen Bilimleri Dergisi 8 2 99–114.
IEEE
[1]E. Öğün, İ. Koç, Y. Güral, E. Aydoğmuş, and İ. Özgen, “LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions”, Doğu Fen Bilimleri Dergisi, vol. 8, no. 2, pp. 99–114, Dec. 2025, doi: 10.57244/dfbd.1726117.
ISNAD
Öğün, Erdal - Koç, İbrahim - Güral, Yunus - Aydoğmuş, Ercan - Özgen, İnanç. “LC-MS/MS/Content/Analysis/of/Ethanol/Extracts/from/Some/Naturally/Occurring/Plants/and/Their/Biological/Activity/Against/Certain/Plant/Pathogenic/Microorganisms/Under/In/Vitro/Conditions”. Doğu Fen Bilimleri Dergisi 8/2 (December 1, 2025): 99-114. https://doi.org/10.57244/dfbd.1726117.
JAMA
1.Öğün E, Koç İ, Güral Y, Aydoğmuş E, Özgen İ. LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions. Doğu Fen Bilimleri Dergisi. 2025;8:99–114.
MLA
Öğün, Erdal, et al. “LC-MS/MS/Content/Analysis/of/Ethanol/Extracts/from/Some/Naturally/Occurring/Plants/and/Their/Biological/Activity/Against/Certain/Plant/Pathogenic/Microorganisms/Under/In/Vitro/Conditions”. Doğu Fen Bilimleri Dergisi, vol. 8, no. 2, Dec. 2025, pp. 99-114, doi:10.57244/dfbd.1726117.
Vancouver
1.Erdal Öğün, İbrahim Koç, Yunus Güral, Ercan Aydoğmuş, İnanç Özgen. LC-MS/MS Content Analysis of Ethanol Extracts from Some Naturally Occurring Plants and Their Biological Activity Against Certain Plant Pathogenic Microorganisms Under In Vitro Conditions. Doğu Fen Bilimleri Dergisi. 2025 Dec. 1;8(2):99-114. doi:10.57244/dfbd.1726117