Research Article
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Year 2020, Volume 2, Issue 2, 52 - 61, 26.08.2020
https://doi.org/10.38058/ijsl.701095

Abstract

References

  • 1- DR. MOHAMMED JIBRIN NDEJIKO, DEPARTMENT OF MICROBIOLOGY, IBB-UNIVERSITY, LAPAI. NIGERI. ndejiko@gmail.com
  • 2- DR. ABDULKARIM ALI DEBA, ATBU, BAUCHI. NIGERIA. abdulkarimalideba@gmail.com

Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar

Year 2020, Volume 2, Issue 2, 52 - 61, 26.08.2020
https://doi.org/10.38058/ijsl.701095

Abstract

Rice is a modern short-day plant but equally flower during non-inductive long-day condition due to the possession of second florigen, Rice Flowering Locus T1 (RFT1). RFT1 is an ortholog of Arabidopsis FT gene which triggers flowering induction under long-day (LD) condition. The gene isolation from Malaysian upland rice cv. Wai that induces flowering were reported. Nucleic acids isolation and amplification of the RFT1 were observed, then phylogenetic relationship among other 5 indica and 1 japonica rice were inferred by comparing the gene amino acids sequence data sets using multiple sequence alignment databases. The amplicon quality result indicated that the gene was fully amplified at above 0.5kb, whereas the sequence alignment revealed that the RFT1 gene was partially amplified based on the gaps identified. Among the 6 indica cultivars sequence aligned, they were almost all conserved except on only 12 amino acids. While the cladogram tree result classified the cultivars into three major groups and include Wai under clade that contains both indica and japonica cultivars. This finding concluded that the cultivars are of high evolutionary relationship and well established their molecular relationship. The cultivars relationship provides necessary information for better understanding of molecular evolution and designing scientific breeding system for generation of new rice cultivar.

References

  • 1- DR. MOHAMMED JIBRIN NDEJIKO, DEPARTMENT OF MICROBIOLOGY, IBB-UNIVERSITY, LAPAI. NIGERI. ndejiko@gmail.com
  • 2- DR. ABDULKARIM ALI DEBA, ATBU, BAUCHI. NIGERIA. abdulkarimalideba@gmail.com

Details

Primary Language English
Subjects Engineering
Journal Section Research Articles
Authors

Sulaıman MOHAMMED> (Primary Author)
GOMBE STATE UNIVERSITY
0000-0003-3094-4769
Nigeria

Supporting Institution UNIVERSITI TEKNOLOGI MALAYSIA
Project Number NIL
Thanks SPECIAL THANK TO IJSL for hiving me the opportunity
Publication Date August 26, 2020
Published in Issue Year 2020, Volume 2, Issue 2

Cite

Bibtex @research article { ijsl701095, journal = {International Journal of Science Letters}, eissn = {2687-4733}, address = {Amasya University, Central Research Laboratory, 05100 İpekköy-AMASYA}, publisher = {Amasya University}, year = {2020}, volume = {2}, number = {2}, pages = {52 - 61}, doi = {10.38058/ijsl.701095}, title = {Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar}, key = {cite}, author = {Mohammed, Sulaıman} }
APA Mohammed, S. (2020). Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar . International Journal of Science Letters , 2 (2) , 52-61 . DOI: 10.38058/ijsl.701095
MLA Mohammed, S. "Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar" . International Journal of Science Letters 2 (2020 ): 52-61 <https://dergipark.org.tr/en/pub/ijsl/issue/56491/701095>
Chicago Mohammed, S. "Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar". International Journal of Science Letters 2 (2020 ): 52-61
RIS TY - JOUR T1 - Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar AU - SulaımanMohammed Y1 - 2020 PY - 2020 N1 - doi: 10.38058/ijsl.701095 DO - 10.38058/ijsl.701095 T2 - International Journal of Science Letters JF - Journal JO - JOR SP - 52 EP - 61 VL - 2 IS - 2 SN - -2687-4733 M3 - doi: 10.38058/ijsl.701095 UR - https://doi.org/10.38058/ijsl.701095 Y2 - 2020 ER -
EndNote %0 International Journal of Science Letters Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar %A Sulaıman Mohammed %T Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar %D 2020 %J International Journal of Science Letters %P -2687-4733 %V 2 %N 2 %R doi: 10.38058/ijsl.701095 %U 10.38058/ijsl.701095
ISNAD Mohammed, Sulaıman . "Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar". International Journal of Science Letters 2 / 2 (August 2020): 52-61 . https://doi.org/10.38058/ijsl.701095
AMA Mohammed S. Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. IJSL. 2020; 2(2): 52-61.
Vancouver Mohammed S. Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. International Journal of Science Letters. 2020; 2(2): 52-61.
IEEE S. Mohammed , "Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar", International Journal of Science Letters, vol. 2, no. 2, pp. 52-61, Aug. 2020, doi:10.38058/ijsl.701095