Research Article

Molecular Identification and Characterization of LEA Proteins in Jujube Genome

Volume: 5 Number: 2 December 27, 2019
EN

Molecular Identification and Characterization of LEA Proteins in Jujube Genome

Abstract

LEA proteins, which are involved in the normal growth and development processes of plants, also play a protective role against abiotic stresses such as salt stress and drought. Although the LEA gene family has been identified in many plants to date, no comprehensive study of the characterization of LEA-encoding genes in the jujube (Ziziphus jujuba Mill.) genome have been performed. As being the best-known member of Rhamnaceae family, jujube (Ziziphus jujuba Mill.) is grown in Turkey as well as shows distribution especially in subtropical and tropical regions of the world. Jujube, containing high amounts of vitamin C and sugar; has economical and biological importance with anticancer and anti-inflammatory effects. In this study, it was aimed to define and characterize LEA genes in jujube genome in detail by using bioinformatics tools. The results of the study will provide comprehensive data about the LEA gene family and will present preliminary information for the functional research of jujube LEA proteins.

Keywords

References

  1. Büyük İ, Soydam-Aydın S, Aras S. Bitkilerin stres koşullarına verdiği moleküler cevaplar. Türk Hij ve Deney Biyol Derg 2012.
  2. Chinnusamy V, Schumaker K, Zhu JK. Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants. J. Exp. Bot., 2004. https://doi.org/10.1093/jxb/erh005.
  3. Galau GA, Wang HY, Hughes DW. Cotton Lea5 and Lea14 encode atypical late embryogenesis-abundant proteins. Plant Physiol 1993. https://doi.org/10.1104/pp.101.2.695.
  4. Dure L, Galau G. Developmental Biochemistry of Cottonseed Embryogenesis and Germination: XIII. Regulation of Biosynthesis of Principal Storage Proteins. Plant Physiol 1981. https://doi.org/10.1104/pp.68.1.187.
  5. Dure L, Crouch M, Harada J, Ho THD, Mundy J, Quatrano R, et al. Common amino acid sequence domains among the LEA proteins of higher plants. Plant Mol Biol 1989. https://doi.org/10.1007/BF00036962.
  6. Du D, Zhang Q, Cheng T, Pan H, Yang W, Sun L. Genome-wide identification and analysis of late embryogenesis abundant (LEA) genes in Prunus mume. Mol Biol Rep 2013. https://doi.org/10.1007/s11033-012-2250-3.
  7. Wu C, Hu W, Yan Y, Tie W, Ding Z, Guo J, et al. The late embryogenesis abundant protein family in cassava (manihot esculenta crantz): Genome-wide characterization and expression during abiotic stress. Molecules 2018;23:1–15. https://doi.org/10.3390/molecules23051196.
  8. Battaglia M, Olvera-Carrillo Y, Garciarrubio A, Campos F, Covarrubias AA. The enigmatic LEA proteins and other hydrophilins. Plant Physiol 2008. https://doi.org/10.1104/pp.108.120725.

Details

Primary Language

English

Subjects

Engineering

Journal Section

Research Article

Authors

Kevser Betül Ceylan This is me
Türkiye

Yusuf Ceylan This is me
Türkiye

Buket Ustaoğlu This is me
Türkiye

Mehmet Cengiz Baloğlu This is me
Türkiye

Publication Date

December 27, 2019

Submission Date

November 3, 2019

Acceptance Date

December 13, 2019

Published in Issue

Year 2019 Volume: 5 Number: 2

APA
Ceylan, K. B., Ceylan, Y., Ustaoğlu, B., Baloğlu, M. C., & Çelik Altunoğlu, Y. (2019). Molecular Identification and Characterization of LEA Proteins in Jujube Genome. Kastamonu University Journal of Engineering and Sciences, 5(2), 101-146. https://izlik.org/JA37JE65KR
AMA
1.Ceylan KB, Ceylan Y, Ustaoğlu B, Baloğlu MC, Çelik Altunoğlu Y. Molecular Identification and Characterization of LEA Proteins in Jujube Genome. KUJES. 2019;5(2):101-146. https://izlik.org/JA37JE65KR
Chicago
Ceylan, Kevser Betül, Yusuf Ceylan, Buket Ustaoğlu, Mehmet Cengiz Baloğlu, and Yasemin Çelik Altunoğlu. 2019. “Molecular Identification and Characterization of LEA Proteins in Jujube Genome”. Kastamonu University Journal of Engineering and Sciences 5 (2): 101-46. https://izlik.org/JA37JE65KR.
EndNote
Ceylan KB, Ceylan Y, Ustaoğlu B, Baloğlu MC, Çelik Altunoğlu Y (December 1, 2019) Molecular Identification and Characterization of LEA Proteins in Jujube Genome. Kastamonu University Journal of Engineering and Sciences 5 2 101–146.
IEEE
[1]K. B. Ceylan, Y. Ceylan, B. Ustaoğlu, M. C. Baloğlu, and Y. Çelik Altunoğlu, “Molecular Identification and Characterization of LEA Proteins in Jujube Genome”, KUJES, vol. 5, no. 2, pp. 101–146, Dec. 2019, [Online]. Available: https://izlik.org/JA37JE65KR
ISNAD
Ceylan, Kevser Betül - Ceylan, Yusuf - Ustaoğlu, Buket - Baloğlu, Mehmet Cengiz - Çelik Altunoğlu, Yasemin. “Molecular Identification and Characterization of LEA Proteins in Jujube Genome”. Kastamonu University Journal of Engineering and Sciences 5/2 (December 1, 2019): 101-146. https://izlik.org/JA37JE65KR.
JAMA
1.Ceylan KB, Ceylan Y, Ustaoğlu B, Baloğlu MC, Çelik Altunoğlu Y. Molecular Identification and Characterization of LEA Proteins in Jujube Genome. KUJES. 2019;5:101–146.
MLA
Ceylan, Kevser Betül, et al. “Molecular Identification and Characterization of LEA Proteins in Jujube Genome”. Kastamonu University Journal of Engineering and Sciences, vol. 5, no. 2, Dec. 2019, pp. 101-46, https://izlik.org/JA37JE65KR.
Vancouver
1.Kevser Betül Ceylan, Yusuf Ceylan, Buket Ustaoğlu, Mehmet Cengiz Baloğlu, Yasemin Çelik Altunoğlu. Molecular Identification and Characterization of LEA Proteins in Jujube Genome. KUJES [Internet]. 2019 Dec. 1;5(2):101-46. Available from: https://izlik.org/JA37JE65KR

18397   |   18396|