Research Article

Expression profiling of BSD domain-containing genes in apricot during different developmental stages

Volume: 37 Number: 2 August 2, 2024
TR EN

Expression profiling of BSD domain-containing genes in apricot during different developmental stages

Abstract

Plant transcription factors are evolutionarily conserved proteins that play an important role in the transcriptional regulation of gene expression by binding to their specific DNA sequences. BSD (mammalian BTF2-like transcription factors, synapse-associated proteins, and DOS2-like proteins) transcription factors are conserved in various species, from protozoa to humans, and are characterized by a typical BSD domain. However, little information is available about their possible roles in plant growth and development, and to date, members of this transcription factor family have not been systematically identified and analyzed in apricot. In this study, two BSD domain-encoding genes were identified in the apricot genome. Expression profile analysis by RT-qPCR revealed that both genes participate in different developmental stages of three different organs in apricot. PaBSD1 was expressed higher than PaBSD2 only in the stamen. Moreover, PaBSD2 was higher expressed than PaBSD1 in four different fruit stages, young leaf, leaf bud, sepal and petal. This study reveals the critical roles of BSD transcription factors in apricot development, with PaBSD1 showing higher expression in stamen and PaBSD2 in various fruit stages and leaf tissues. These findings provide a foundation for future functional studies and apricot breeding programs.

Keywords

References

  1. Ba LJ, Shan W, Xiao YY, Chen JY, Lu, WJ, Kuang, JF (2014) A ripening-induced transcription factor MaBSD1 interacts with promoters of MaEXP1/2 from banana fruit. Plant Cell Reports 33: 1913-1920.
  2. Bustin SA (2000) Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. Journal of molecular endocrinology 25(2): 169-193.
  3. Doerks T, Huber S, Buchner E, Bork P (2002) BSD: A novel domain in transcription factors and synapse-associated proteins. Trends in biochemical sciences 27(4): 168-170.
  4. Fan Y, Niu X, Huang L, Gros, R, Lu H, Hawkins M, Xiao F (2020) A novel BSD domain-containing transcription factor controls vegetative growth, leaf senescence, and fruit quality in tomato. Journal of Experimental Botany 71(22): 6945-6957.
  5. Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Khurana JP (2007) F-box proteins in rice Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant physiology 143(4): 1467-1483.
  6. Jung S, Lee T, Cheng CH, Buble K, Zheng P, Yu J, Main D (2019) 15 years of GDR: New data and functionality in the Genome Database for Rosaceae. Nucleic acids research 47(1): 1137-1145.
  7. Kostina KF (1960) The use of varietal resources of apricots for breeding. Trud. nikit. bot. Sad. (Trans. Nikita bot. Gdn.) 40: 45-63.
  8. Letunic I, Khedkar S, Bork P (2021) SMART: Recent updates, new developments and status in 2020. Nucleic acids research 49(1): 458-460.

Details

Primary Language

English

Subjects

Agricultural Molecular Engineering of Nucleic Acids and Proteins

Journal Section

Research Article

Publication Date

August 2, 2024

Submission Date

June 10, 2024

Acceptance Date

July 16, 2024

Published in Issue

Year 2024 Volume: 37 Number: 2

APA
Kıyak, A. (2024). Expression profiling of BSD domain-containing genes in apricot during different developmental stages. Mediterranean Agricultural Sciences, 37(2), 81-84. https://doi.org/10.29136/mediterranean.1498904
AMA
1.Kıyak A. Expression profiling of BSD domain-containing genes in apricot during different developmental stages. Mediterranean Agricultural Sciences. 2024;37(2):81-84. doi:10.29136/mediterranean.1498904
Chicago
Kıyak, Ali. 2024. “Expression Profiling of BSD Domain-Containing Genes in Apricot During Different Developmental Stages”. Mediterranean Agricultural Sciences 37 (2): 81-84. https://doi.org/10.29136/mediterranean.1498904.
EndNote
Kıyak A (August 1, 2024) Expression profiling of BSD domain-containing genes in apricot during different developmental stages. Mediterranean Agricultural Sciences 37 2 81–84.
IEEE
[1]A. Kıyak, “Expression profiling of BSD domain-containing genes in apricot during different developmental stages”, Mediterranean Agricultural Sciences, vol. 37, no. 2, pp. 81–84, Aug. 2024, doi: 10.29136/mediterranean.1498904.
ISNAD
Kıyak, Ali. “Expression Profiling of BSD Domain-Containing Genes in Apricot During Different Developmental Stages”. Mediterranean Agricultural Sciences 37/2 (August 1, 2024): 81-84. https://doi.org/10.29136/mediterranean.1498904.
JAMA
1.Kıyak A. Expression profiling of BSD domain-containing genes in apricot during different developmental stages. Mediterranean Agricultural Sciences. 2024;37:81–84.
MLA
Kıyak, Ali. “Expression Profiling of BSD Domain-Containing Genes in Apricot During Different Developmental Stages”. Mediterranean Agricultural Sciences, vol. 37, no. 2, Aug. 2024, pp. 81-84, doi:10.29136/mediterranean.1498904.
Vancouver
1.Ali Kıyak. Expression profiling of BSD domain-containing genes in apricot during different developmental stages. Mediterranean Agricultural Sciences. 2024 Aug. 1;37(2):81-4. doi:10.29136/mediterranean.1498904

Creative Commons License

Mediterranean Agricultural Sciences is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.