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Mersin, Türkiye'de Beta Globin Gen Mutasyonlarının Değerlendirilmesi: Tek Merkezli Bir Deneyim

Year 2025, Volume: 12 Issue: 1, 27 - 33, 30.04.2025
https://doi.org/10.47572/muskutd.1621921

Abstract

Beta-talasemi, β-globin zincir sentezinin eksikliği veya yokluğundan kaynaklanan otozomal resesif kalıtım gösteren, dünya çapında en yaygın tek gen hastalığıdır. Çalışmamızın amacı Mersin ilinde beta talasemi tanısı alan hastaların mutasyon tiplerini ve sıklığını değerlendirmektir. 2017-2019 yılları arasında Mersin Üniversitesi Tıp Fakültesi hastanesinde hemoglobinopati taraması yapılan 292 hastanın klinik verileri retrospektif olarak incelendi. HBB geninde mutasyon bulunan 292 hastanın %55,5'inde (n=162) beta talasemi vardı. Beta talasemili hastalarda, 4'ü anormal Hb varyantı olmak üzere 32 farklı mutasyon ve bu hastaların 22'sinde 12 farklı bileşik heterozigot β-tal mutasyonu tespit edildi. En sık görülen alel %25.2 frekansla c.93-21G>A idi. En yaygın bileşik varyasyon HBB:c.*233G>C/HBB:c.92+6T>C/A, (%27,4) idi. Türkiye'de daha önce bildirilmemiş olan HBB:c.92+5G>A mutasyonunu tespit ettik. Beta-talasemi mutasyonlarının tipleri ve sıklıkları coğrafi bölgeler arasında farklılık göstermektedir. Bu çalışmada, beta-talasemi mutasyonlarının yaygınlığını moleküler düzeyde incelemiş ve DNA dizi analizi ile tanımlanamayan mutasyonların tespit oranını artırmıştır. Beta-talasemide yeni mutasyonların tanımlanması genetik danışmanlık, prenatal tanı, tarama programları ve literatür için yararlıdır.

References

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  • Yaprak I. Beta Talasemi Tanı ve Tedavisinde Güncel Yaklaşımlar. STED. 2004;13:58-9.
  • Origa R. β-Thalassemia. ACMG. 2017;19(6):609-619.
  • Thein SL. Molecular basis of β thalassemia and potential therapeutic targets. BCMD. 2018;70:54-65.
  • Jaing TH, Chang TY, Chen SH, et al. Molecular genetics of β-thalassemia: A narrative review. Medicine. 2021;100(45):e27522.
  • The HbVar Database. (http://globin.bx.psu.edu/cgi-bin/hbvar/ query_vars3). access date 22.09.2024.
  • Tadmouri GO, Başak AN. Beta-thalassemia in Turkey: a review of the clinical, epidemiological, molecular, and evolutionary aspects. Hemoglobin. 2001;25(2):227-39.
  • Weatherall DJ, Clegg JB. The Thalassemia Syndromes. England: Blackwell Science Ltd. 2001; 4th ed. Oxford
  • Republic of Turkey Ministry of Health, General Directorate of Public Health. Hemoglobinopati Tanı Rehberi. 2016 [cited 2024 May 13] Available from: https://hsgm.saglik.gov.tr/tr/tghsldb-rehberler/hemoglobinopati-tan%C4%B1-rehberi.html
  • Genoox. ‘Franklin by Genoox’. https://franklin.genoox.com. access date 10.06.2024.
  • ClinVar. https://www.ncbi.nlm.nih.gov/clinvar/ access date 15.06.2024.
  • Riggs ER, Andersen EF, Cherry AM, et al. Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020;22(2):245-57.
  • Thalassemia Research Network. Interactive database for hemoglobin variants (ITHANET). Ithagene database. Available from: http://ithanet.eu/db/ithagenes.) access date. 25.08.2024.
  • Basak AN. The molecular pathology of beta-thalassemia in Turkey: The Boğaziçi university experience. Hemoglobin. 2007;31(2):233-41.
  • Ince HH, Ayyildiz O, Kalkanli S, et al. Molecular basis of beta-thalassemia mutations in Diyarbakir in the southeastern region of Turkey. Hemoglobin. 2003;27(4):275-8.
  • Beksac MS, Gumruk F, Gurgey A, et al. Prenatal diagnosis of hemoglobinopathies in Hacettepe University, Turkey. PHO. 2011;28(1):51-5.
  • Sirdah MM, Sievertsen J, Al-Yazji MS, et al. The spectrum of β-thalassemia mutations in Gaza Strip, Palestine. BCMD. 2013;50(4):247–51.
  • Smith DL, Mitui M, Park JY, et al. Characterization of the HBB: c.*233G > C Variant: No Evidence of a β-Thalassemic Phenotype. Hemoglobin. 2016;40(1):25-8.
  • Aziz, N.-A.; Taib, W.-R.W.; Kharolazaman, N.-K.; Ismail, I.; Al-Jamal, H.A.N.; Jamil, N.W.-A.W.A.; Esa, E.; Ibrahim, H. Evidence of new intragenic HBB haplotypes model for the prediction of beta-thalassemia in the Malaysian population. Sci. Rep. 2021, 11, 1–6.
  • Tadmouri GO, Tüzmen S, Ozçelik H, et al. Molecular and population genetic analyses of beta-thalassemia in Turkey. AJH. 1998;57(3):215-20.
  • Hocaoglu-Emre F, Yenmis G, Saribal D, et al. IVSII-74 T>G: As harmless as we thought? TJB. 2019;44(1): 41-6.
  • Aydınok Y, Oymak Y, Atabay B, et al. A National Registry of Thalassemia in Turkey: Demographicand Disease Characteristics of Patients, Achievements, and Challenges in Prevention. Turk J Haematol. 2018;35(1):12-8.
  • Dilmec F, Koc A, Akkafa F. Investigation of - SS globingene mutations in patients with β-thalassemia in Şanlıurfa province of Turkey. Turkiye Klinikleri J Med Sci 2010;30:514-9.
  • Indrak K, Brabec V, Indrakova J, et al. Molecular characterization of beta-thalassemia in Czechoslovakia. Human genetics. 1992; 88(4):399–404.
  • Villegas A, Ropero P, González FA, et al. The thalassemia syndromes: molecular characterization in the Spanish population. Hemoglobin. 2001;25(3):273-83.
  • Karaer D, Sahinoglu B, Pekpak Sahinoglu E, et al. The Molecular Spectrum of Βeta Thalassemia Mutations in Southeastern, Turkey. GMJ. 2023;34:63-7.
  • Guvenc B, Canataroglu A, Unsal C, et al. β-Thalassemia mutations and hemoglobinopathies in Adana, Turkey: results from a single center study. Arch Med Sci. 2012;8(3):411-4.
  • Murad H, Moasses F, Dabboul A, et al. Geographical distribution of β-globin gene mutations in Syria. Hematology. 2018;23(9):697-704.
  • Jarjour RA, Murad H, Moasses F, Al-Achkar W. Molecular update of β-thalassemia mutations in the Syrian population: identification of rare β-thalassemia mutations. Hemoglobin. 2014;38(4):272-6.
  • Fucharoen S, Weatherall DJ. The hemoglobin E thalassemias. Cold Spring Harb Perspect Med. 2012;2(8):a011734.
  • Akar E, Akar N. A review of abnormal hemoglobins in Turkey. Turk. J. Hematol. 2007; 24(4): 143-5.
  • Canatan D, Delibas S Report on Ten Years' Experience of Premarital Hemoglobinopathy Screening at a Center in Antalya, Southern Turkey. Hemoglobin. 2016 Aug;40(4):273-6.
  • Atalay EÖ, Koyuncu H, Turgut B, Atalay A, Yıldız S, Bahadır A, Köseler A. High incidence of Hb D- Los Angeles [β121(GH4) Glu>Gln] in Denizli province. Hemoglobin. 2005; 29(4): 307-10.
  • Zimmerman SA, O'Branski EE, Rosse WF, Ware RE. Hemoglobin S/O(Arab): thirteen new cases and review of the literature. AJHl. 1999;60(4):279-84.
  • Elbashir I, Elsayed Yousif TY. Molecular Detection of Hemoglobin O-Arab in the Sudanese Population. Int J Gen Med. 2023;16:3323-30.
  • Dror S. Clinical and hematological features of homozygous hemoglobin O-Arab [beta 121 Glu → Lys]. Pediatr Blood Cancer. 2013;60(3):506-7.
  • Al-Allawi NA, Hassan KM, Sheikha AK, et al. Β-thalassemia mutations among transfusion-dependent thalassemia major patients in northern Iraq. Mol Biol Int. 2010;2010:479282.
  • Najmabadi H, Karimi-Nejad R, Sahebjam S, et al. The beta-thalassemia mutation spectrum in the Iranian population. Hemoglobin. 2001;25:285-96.
  • Abbasali FH, Mahmoud KS, Hengameh N, et al. Rare and New Mutations of B-Globin in Azari Population of Iran, a Considerable Diversity. BJMG. 2023;25(2):51-62.
  • Bilgen T, Canatan D, Arikan Y, Yeşilipek A, Keser İ. The effect of HBB:c.*+96T>C (3’UTR +1570 T>C) on the mild b-thalassemia intermedia phenotype. Turk J Hemato, 2011; 28(3), 219-22.

Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience

Year 2025, Volume: 12 Issue: 1, 27 - 33, 30.04.2025
https://doi.org/10.47572/muskutd.1621921

Abstract

Beta-thalassemia is the most common single gene disease worldwide with an autosomal recessive inheritance caused by the deficiency or absence of β-globin chain synthesis. The aim of our study is to evaluate the types and frequencies of mutations in patients diagnosed with beta thalassemia in the province of Mersin. Clinical data of 292 patients who underwent hemoglobinopathy screening at Mersin University Faculty of Medicine Hospital between 2017 and 2019 were retrospectively analysed. Of the 292 patients with mutations in the HBB gene, 55.5% (n=162) had beta thalassemia. In patients with beta thalassemia, 32 different mutations, including 4 abnormal Hb variants, and 12 different compound heterozygous β-tal mutations were detected in 22 of these patients. The most commonly seen allele was c.93-21G>A with a frequency of 25.2%. The most common compound variation was HBB:c.*233G>C/HBB:c.92+6T>C/A, (27.4%). We detected the mutation HBB:c.92+5G>A, which has not been previously reported in Turkey. The types and frequencies of beta-thalassemia mutations vary among geographic regions. This study examined the prevalence of beta-thalassemia mutations at the molecular level and enhanced the detection rate of unidentified mutations by DNA sequence analysis. Identification of new mutations in beta-thalassemia is useful for genetic counseling, prenatal diagnostic, screening programs, and literature.

Ethical Statement

Mersin University Local Ethics Committee/650/2022.

References

  • Cao A, Galanello R. Beta-thalassemia. ACMG. 2010;12(2):61-76.
  • Yaprak I. Beta Talasemi Tanı ve Tedavisinde Güncel Yaklaşımlar. STED. 2004;13:58-9.
  • Origa R. β-Thalassemia. ACMG. 2017;19(6):609-619.
  • Thein SL. Molecular basis of β thalassemia and potential therapeutic targets. BCMD. 2018;70:54-65.
  • Jaing TH, Chang TY, Chen SH, et al. Molecular genetics of β-thalassemia: A narrative review. Medicine. 2021;100(45):e27522.
  • The HbVar Database. (http://globin.bx.psu.edu/cgi-bin/hbvar/ query_vars3). access date 22.09.2024.
  • Tadmouri GO, Başak AN. Beta-thalassemia in Turkey: a review of the clinical, epidemiological, molecular, and evolutionary aspects. Hemoglobin. 2001;25(2):227-39.
  • Weatherall DJ, Clegg JB. The Thalassemia Syndromes. England: Blackwell Science Ltd. 2001; 4th ed. Oxford
  • Republic of Turkey Ministry of Health, General Directorate of Public Health. Hemoglobinopati Tanı Rehberi. 2016 [cited 2024 May 13] Available from: https://hsgm.saglik.gov.tr/tr/tghsldb-rehberler/hemoglobinopati-tan%C4%B1-rehberi.html
  • Genoox. ‘Franklin by Genoox’. https://franklin.genoox.com. access date 10.06.2024.
  • ClinVar. https://www.ncbi.nlm.nih.gov/clinvar/ access date 15.06.2024.
  • Riggs ER, Andersen EF, Cherry AM, et al. Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020;22(2):245-57.
  • Thalassemia Research Network. Interactive database for hemoglobin variants (ITHANET). Ithagene database. Available from: http://ithanet.eu/db/ithagenes.) access date. 25.08.2024.
  • Basak AN. The molecular pathology of beta-thalassemia in Turkey: The Boğaziçi university experience. Hemoglobin. 2007;31(2):233-41.
  • Ince HH, Ayyildiz O, Kalkanli S, et al. Molecular basis of beta-thalassemia mutations in Diyarbakir in the southeastern region of Turkey. Hemoglobin. 2003;27(4):275-8.
  • Beksac MS, Gumruk F, Gurgey A, et al. Prenatal diagnosis of hemoglobinopathies in Hacettepe University, Turkey. PHO. 2011;28(1):51-5.
  • Sirdah MM, Sievertsen J, Al-Yazji MS, et al. The spectrum of β-thalassemia mutations in Gaza Strip, Palestine. BCMD. 2013;50(4):247–51.
  • Smith DL, Mitui M, Park JY, et al. Characterization of the HBB: c.*233G > C Variant: No Evidence of a β-Thalassemic Phenotype. Hemoglobin. 2016;40(1):25-8.
  • Aziz, N.-A.; Taib, W.-R.W.; Kharolazaman, N.-K.; Ismail, I.; Al-Jamal, H.A.N.; Jamil, N.W.-A.W.A.; Esa, E.; Ibrahim, H. Evidence of new intragenic HBB haplotypes model for the prediction of beta-thalassemia in the Malaysian population. Sci. Rep. 2021, 11, 1–6.
  • Tadmouri GO, Tüzmen S, Ozçelik H, et al. Molecular and population genetic analyses of beta-thalassemia in Turkey. AJH. 1998;57(3):215-20.
  • Hocaoglu-Emre F, Yenmis G, Saribal D, et al. IVSII-74 T>G: As harmless as we thought? TJB. 2019;44(1): 41-6.
  • Aydınok Y, Oymak Y, Atabay B, et al. A National Registry of Thalassemia in Turkey: Demographicand Disease Characteristics of Patients, Achievements, and Challenges in Prevention. Turk J Haematol. 2018;35(1):12-8.
  • Dilmec F, Koc A, Akkafa F. Investigation of - SS globingene mutations in patients with β-thalassemia in Şanlıurfa province of Turkey. Turkiye Klinikleri J Med Sci 2010;30:514-9.
  • Indrak K, Brabec V, Indrakova J, et al. Molecular characterization of beta-thalassemia in Czechoslovakia. Human genetics. 1992; 88(4):399–404.
  • Villegas A, Ropero P, González FA, et al. The thalassemia syndromes: molecular characterization in the Spanish population. Hemoglobin. 2001;25(3):273-83.
  • Karaer D, Sahinoglu B, Pekpak Sahinoglu E, et al. The Molecular Spectrum of Βeta Thalassemia Mutations in Southeastern, Turkey. GMJ. 2023;34:63-7.
  • Guvenc B, Canataroglu A, Unsal C, et al. β-Thalassemia mutations and hemoglobinopathies in Adana, Turkey: results from a single center study. Arch Med Sci. 2012;8(3):411-4.
  • Murad H, Moasses F, Dabboul A, et al. Geographical distribution of β-globin gene mutations in Syria. Hematology. 2018;23(9):697-704.
  • Jarjour RA, Murad H, Moasses F, Al-Achkar W. Molecular update of β-thalassemia mutations in the Syrian population: identification of rare β-thalassemia mutations. Hemoglobin. 2014;38(4):272-6.
  • Fucharoen S, Weatherall DJ. The hemoglobin E thalassemias. Cold Spring Harb Perspect Med. 2012;2(8):a011734.
  • Akar E, Akar N. A review of abnormal hemoglobins in Turkey. Turk. J. Hematol. 2007; 24(4): 143-5.
  • Canatan D, Delibas S Report on Ten Years' Experience of Premarital Hemoglobinopathy Screening at a Center in Antalya, Southern Turkey. Hemoglobin. 2016 Aug;40(4):273-6.
  • Atalay EÖ, Koyuncu H, Turgut B, Atalay A, Yıldız S, Bahadır A, Köseler A. High incidence of Hb D- Los Angeles [β121(GH4) Glu>Gln] in Denizli province. Hemoglobin. 2005; 29(4): 307-10.
  • Zimmerman SA, O'Branski EE, Rosse WF, Ware RE. Hemoglobin S/O(Arab): thirteen new cases and review of the literature. AJHl. 1999;60(4):279-84.
  • Elbashir I, Elsayed Yousif TY. Molecular Detection of Hemoglobin O-Arab in the Sudanese Population. Int J Gen Med. 2023;16:3323-30.
  • Dror S. Clinical and hematological features of homozygous hemoglobin O-Arab [beta 121 Glu → Lys]. Pediatr Blood Cancer. 2013;60(3):506-7.
  • Al-Allawi NA, Hassan KM, Sheikha AK, et al. Β-thalassemia mutations among transfusion-dependent thalassemia major patients in northern Iraq. Mol Biol Int. 2010;2010:479282.
  • Najmabadi H, Karimi-Nejad R, Sahebjam S, et al. The beta-thalassemia mutation spectrum in the Iranian population. Hemoglobin. 2001;25:285-96.
  • Abbasali FH, Mahmoud KS, Hengameh N, et al. Rare and New Mutations of B-Globin in Azari Population of Iran, a Considerable Diversity. BJMG. 2023;25(2):51-62.
  • Bilgen T, Canatan D, Arikan Y, Yeşilipek A, Keser İ. The effect of HBB:c.*+96T>C (3’UTR +1570 T>C) on the mild b-thalassemia intermedia phenotype. Turk J Hemato, 2011; 28(3), 219-22.
There are 40 citations in total.

Details

Primary Language English
Subjects ​Internal Diseases
Journal Section Original Article
Authors

Zuhal Mert Altıntaş 0000-0001-9805-6624

Nazan Eras 0000-0001-5475-1684

Publication Date April 30, 2025
Submission Date January 17, 2025
Acceptance Date March 27, 2025
Published in Issue Year 2025 Volume: 12 Issue: 1

Cite

APA Mert Altıntaş, Z., & Eras, N. (2025). Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience. Muğla Sıtkı Koçman Üniversitesi Tıp Dergisi, 12(1), 27-33. https://doi.org/10.47572/muskutd.1621921
AMA Mert Altıntaş Z, Eras N. Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience. MMJ. April 2025;12(1):27-33. doi:10.47572/muskutd.1621921
Chicago Mert Altıntaş, Zuhal, and Nazan Eras. “Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience”. Muğla Sıtkı Koçman Üniversitesi Tıp Dergisi 12, no. 1 (April 2025): 27-33. https://doi.org/10.47572/muskutd.1621921.
EndNote Mert Altıntaş Z, Eras N (April 1, 2025) Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience. Muğla Sıtkı Koçman Üniversitesi Tıp Dergisi 12 1 27–33.
IEEE Z. Mert Altıntaş and N. Eras, “Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience”, MMJ, vol. 12, no. 1, pp. 27–33, 2025, doi: 10.47572/muskutd.1621921.
ISNAD Mert Altıntaş, Zuhal - Eras, Nazan. “Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience”. Muğla Sıtkı Koçman Üniversitesi Tıp Dergisi 12/1 (April 2025), 27-33. https://doi.org/10.47572/muskutd.1621921.
JAMA Mert Altıntaş Z, Eras N. Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience. MMJ. 2025;12:27–33.
MLA Mert Altıntaş, Zuhal and Nazan Eras. “Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience”. Muğla Sıtkı Koçman Üniversitesi Tıp Dergisi, vol. 12, no. 1, 2025, pp. 27-33, doi:10.47572/muskutd.1621921.
Vancouver Mert Altıntaş Z, Eras N. Evaluation of Beta Globin Gene Mutations in Mersin, Turkey: A Single Center Experience. MMJ. 2025;12(1):27-33.