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Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds

Year 2025, Volume: 7 Issue: 1, 92 - 102

Abstract

Boron dipyrromethene dyes are one of the most important types of compounds in various fields such as chemical indicators, biological labelling, photodynamic therapy, and solar cells. One of the important derivatives of these dyes are the thiophene-fused BODIPY structures. These structures impart special features such as near IR absorption, heavy atom free photosensitization and compact structure. Although having important aspects, these derivatives of dyes suffer from low synthetic yields. In a few decades various derivatives of fused BODIPY structures were published. However, still more studies are needed to increase the number of these dyes in order to exploit more features and increase the synthetic yields. In the current work, two near-infrared absorbing thiophene fused Bodipy compounds, named CTFBOD1-2, were designed, synthesized and characterized using various techniques. Both compounds were substituted with meso-4-carboxyphenyl units since we have investigated their potential for dye-sensitized solar cell structures. And as electron donor structures, 4-methoxyphenyl and hexylthiophene units were attached to form a donor-acceptor structure. Photophysical and cyclic voltammetry characterizations were also accomplished. In the hexyl-thiophene attached structure (CTFBOD2) we have observed more bathochromic shift in both absorption and emission probably due to the stronger electron pull ability of the thiophene unit. With this structure up to 775 nm absorption is observed, and it is highly important to reach this window with compact structures for solar harvesting. We have observed that the compounds could have been investigated as building blocks in various fields such as dye-sensitized solar cell concept as a photosensitizer.

Supporting Institution

The author thanks TUBITAK (Project No: 216Z015) for financial support

Project Number

216Z015

References

  • P. De Bonfils, L. Péault, P. Nun, V. Coeffard, State of the art of bodipy-based photocatalysts in organic synthesis, European Journal of Organic Chemistry. 12 (2021), 1809-1824.
  • N. Boens, B. Verbelen, W. Dehaen, Postfunctionalization of the BODIPY core: synthesis and spectroscopy. European Journal of Organic Chemistry. 30 (2015), 6577-6595.
  • Y. Cakmak, Synthesis and investigation of a hexyl substituted thieno-fused BODIPY derivative as a versatile near-IR fluorophore, Turkish Journal of Chemistry. 46 (2022), 1120-1127.
  • M. Tok, B. Say, G. Dölek, B. Tatar, D. Özgur, Ç. Kurukavak, M. Kus, Y. Dede, Y. Çakmak, Substitution effects in distyryl BODIPYs for near infrared organic photovoltaics, Journal of Photochemistry and Photobiology A-Chemistry. 429 (2022), 113933.
  • B. Can, Y. Çakmak, Exploration of Two Different Strategies in Near IR Absorbing Boron Dipyrromethene Derivatives for Photodynamic and Bioimaging Purposes, ChemistrySelect. 6 (2021), 8855-8860.
  • O. Buyukcakir, O. Bozdemir, S. Kolemen, S. Erbas, E. Akkaya, Tetrastyryl-Bodipy dyes: Convenient synthesis and characterization of elusive Near IR fluorophores, Organic Letters. 11 (2009), 4644-4647.
  • B. Kukrer, E. U. Akkaya, Red to near IR fluorescent signalling of carbohydrates, Tetrahedron Letters. 40 (1999), 9125-9128.
  • T. Bura, N. Leclerc, S. Fall, P. Lévêque, T. Heiser, P. Retailleau, S. Rihn, A. Mirloup, R. Ziessel, High-performance solution-processed solar cells and ambipolar behavior in organic field-effect transistors with Thienyl-BODIPY Scaffoldings, Journal of the American Chemical Society. 134 (2012), 17404-17407.
  • S. Kolemen, O. A. Bozdemir, Y. Cakmak, G. Barin, S. Erten-Ela, M. Marszalek, J. H. Yum, S. M. Zakeeruddin, M. K. Nazeeruddin, M. Gratzel and E. U. Akkaya, Optimization of distyryl-Bodipy chromophores for efficient panchromatic sensitization in dye sensitized solar cells, Chemical Science. 2 (2011), 949-954.
  • S. Erten-Ela, M. Yilmaz, B. Icli, Y. Dede, S. Icli, E. U. Akkaya, A panchromatic boradiazaindacene (BODIPY) sensitizer for dye-sensitized solar cells, Organic Letters. 10 (2008), 3299-3302.
  • B. Say, B. Tatar, B. Uzulmez, M. Bakirci, G. Gulseren, Y. Cakmak, Caging of Bodipy Photosensitizers through Hydrazone Bond Formation and their Activation Dynamics, ChemMedChem. 18(13) (2023), e202300199.
  • Z. Li, Z. Zhou, Y. Wang, J. Wang, L. Zhou, H. Cheng, J. Yoon, Activatable nano-photosensitizers for precise photodynamic cancer therapy, Coordination Chemistry Reviews. 2023, 493.
  • A. Prieto-Castaneda, F. Garcia-Garrido, C. Diaz-Norambuena, B. Escriche-Navarro, A. Garcia-Fernandez, J. Banuclos, E. Rebollar, I. Garcia-Moreno, R. Martinez-Manez, S. de la Moya, A. Agarrabeitia, M. Ortiz, Development of geometry-controlled all-orthogonal BODIPY trimers for photodynamic therapy and phototheragnosis, Organic Letters. 24 (2022), 3636-3641.
  • L. Zhao, H. Zhou, Q. Zhou, C. Peng, T. Cheng, G. Liu, Biomimetic fluorescent probe for chiral glutamic acid in water and its application in living cell imaging, Sensors and Actuators B-Chemical. 320 (2020), 128383.
  • O. Tsay, K. Lee, D. Churchill, Selective and competitive cysteine chemosensing: resettable fluorescent "turn on" aqueous detection Cu2+ displacement and salicylaldimine hydrolysis, New Journal of Chemistry. 36 (2012), 1949-1952.
  • A. O. Özkan, H. B. Demir, Fotovoltaik Panellerde Sıcaklık ve Zenit Açısının Panel Güç Üretimine Etkisi. Necmettin Erbakan University Journal of Science and Engineering. 1(1) (2019), 1-9.
  • M. İ. Özgün, A. B. Batıbay, B. Ünal, Y. R. Eker, A. Terlemez, Investigation of the use of TiO2 obtained from endodontic NiTi Files in dye-sensitized solar cells. Necmettin Erbakan University Journal of Science and Engineering. 5(1) (2023), 1-8.
  • F. N. Arslan, İ. Varlı, Synchronous fluorescence spectroscopy method based on chemometrics: Authentication of extra virgin olive oils harvested in Mut (Mersin) region and refined edible oils. Necmettin Erbakan University Journal of Science and Engineering. 5 (2023), 278-287.
  • Y. Kubota, K. Kimura, J. Jin, K. Manseki, K. Funabiki, M. Matsui, Synthesis of near-infrared absorbing and fluorescing thiophene-fused BODIPY dyes with strong electron-donating groups and their application in dye-sensitised solar cells, New Journal of Chemistry. 43 (2019), 1156-1165.
  • K. Umezawa, A. Matsui, Y. Nakamura, D. Citterio, K. Suzuki, Bright, color-tunable fluorescent dyes in the Vis/NIR region: Establishment of new "Tailor-Made" multicolor fluorophores based on Borondipyrromethene, Chemistry-A European Journal. 15 (2009), 1096-1106.
  • L. Leonat, G. Sbârcea, I. Brânzoi, Cyclic voltammetry for energy levels estimation of organic materials, University Politehnica of Bucharest Scientific Bulletin Series B-Chemistry and Materials Science. 75 (2013), 111-118.
  • K. Umezawa, Y. Nakamura, H. Makino, D. Citterio, K. Suzuki, Bright, color-tunable fluorescent dyes in the visible-near-infrared region, Journal of the American Chemical Society. 130 (2008), 1550-1551.

Yakın-Kızılötesinde Absorplayan, Karboksilik Asit ile Fonksiyonlandırılmış Tiyofen Kaynaşık BODIPY Bileşiklerinin Sentezi ve Özellikleri

Year 2025, Volume: 7 Issue: 1, 92 - 102

Abstract

Bor dipirrometen boyaları, kimyasal indikatörler, biyolojik etiketleme, fotodinamik terapi ve güneş pilleri gibi çeşitli alanlarda en önemli bileşik türlerinden biridir. Bu boyaların önemli türevlerinden biri de tiyofen ile kaynaşmış BODIPY yapılarıdır. Bu yapılar, yakın IR absorpsiyonu, ağır atomsuz ışığa duyarlılık ve kompakt yapı gibi özel özellikler kazandırır. Oldukça önemli özellikler barındırmalarına rağmen, bu boyar madde türevleri düşük sentetik verimlere sahip olabilmektedirler. Birkaç on yıl içinde, kaynaşmış BODIPY yapılarının çeşitli türevleri yayınlandı. Bununla birlikte, daha fazla özellikten yararlanmak ve sentetik verimi artırmak için bu boyaların sayısını artırmak için daha fazla çalışmaya ihtiyaç vardır. Bu çalışmada, CTFBOD1-2 olarak adlandırılan iki adet yakın kızılötesi bölgeden absorplama yapabilen tiyofen ile kaynaşmış Bodipy bileşikleri tasarlanmış, sentezlenmiş ve çeşitli teknikler kullanılarak karakterize edilmiştir. Her iki bileşik de mezo-4-karboksifenil birimleri ile türevlendirilmiştir, çünkü boya duyarlı güneş pili yapıları için potansiyel bileşik olma durumları vardır. Ve elektron verici yapıları olarak, bir donör-alıcı yapı oluşturmak için 4-metoksifenil ve hegziltiyofen birimleri de ayrıca sübstitüe edilmiştir. Fotofiziksel ve döngüsel voltametri karakterizasyonları da gerçekleştirilmiştir. Hegzil-tiyofen bağlı yapıda (CTFBOD2), muhtemelen tiyofen biriminin daha güçlü elektron itme kabiliyetine bağlı olarak hem absorpsiyon hem de emisyonda daha fazla batokromik kayma gözlemlenmiştir. Bu yapı ile 775 nm'ye kadar absorplama gözlenebilmekte ve güneş hasadı için kompakt yapılarla bu pencereye ulaşmak son derece önemlidir. Bileşiklerin, ışığa duyarlılaştırıcı olarak boya duyarlı güneş pili konsepti gibi çeşitli alanlarda yapı taşları olarak kullanılabileceği gözlemlenmiştir.

Supporting Institution

TÜBİTAK

Project Number

216Z015

References

  • P. De Bonfils, L. Péault, P. Nun, V. Coeffard, State of the art of bodipy-based photocatalysts in organic synthesis, European Journal of Organic Chemistry. 12 (2021), 1809-1824.
  • N. Boens, B. Verbelen, W. Dehaen, Postfunctionalization of the BODIPY core: synthesis and spectroscopy. European Journal of Organic Chemistry. 30 (2015), 6577-6595.
  • Y. Cakmak, Synthesis and investigation of a hexyl substituted thieno-fused BODIPY derivative as a versatile near-IR fluorophore, Turkish Journal of Chemistry. 46 (2022), 1120-1127.
  • M. Tok, B. Say, G. Dölek, B. Tatar, D. Özgur, Ç. Kurukavak, M. Kus, Y. Dede, Y. Çakmak, Substitution effects in distyryl BODIPYs for near infrared organic photovoltaics, Journal of Photochemistry and Photobiology A-Chemistry. 429 (2022), 113933.
  • B. Can, Y. Çakmak, Exploration of Two Different Strategies in Near IR Absorbing Boron Dipyrromethene Derivatives for Photodynamic and Bioimaging Purposes, ChemistrySelect. 6 (2021), 8855-8860.
  • O. Buyukcakir, O. Bozdemir, S. Kolemen, S. Erbas, E. Akkaya, Tetrastyryl-Bodipy dyes: Convenient synthesis and characterization of elusive Near IR fluorophores, Organic Letters. 11 (2009), 4644-4647.
  • B. Kukrer, E. U. Akkaya, Red to near IR fluorescent signalling of carbohydrates, Tetrahedron Letters. 40 (1999), 9125-9128.
  • T. Bura, N. Leclerc, S. Fall, P. Lévêque, T. Heiser, P. Retailleau, S. Rihn, A. Mirloup, R. Ziessel, High-performance solution-processed solar cells and ambipolar behavior in organic field-effect transistors with Thienyl-BODIPY Scaffoldings, Journal of the American Chemical Society. 134 (2012), 17404-17407.
  • S. Kolemen, O. A. Bozdemir, Y. Cakmak, G. Barin, S. Erten-Ela, M. Marszalek, J. H. Yum, S. M. Zakeeruddin, M. K. Nazeeruddin, M. Gratzel and E. U. Akkaya, Optimization of distyryl-Bodipy chromophores for efficient panchromatic sensitization in dye sensitized solar cells, Chemical Science. 2 (2011), 949-954.
  • S. Erten-Ela, M. Yilmaz, B. Icli, Y. Dede, S. Icli, E. U. Akkaya, A panchromatic boradiazaindacene (BODIPY) sensitizer for dye-sensitized solar cells, Organic Letters. 10 (2008), 3299-3302.
  • B. Say, B. Tatar, B. Uzulmez, M. Bakirci, G. Gulseren, Y. Cakmak, Caging of Bodipy Photosensitizers through Hydrazone Bond Formation and their Activation Dynamics, ChemMedChem. 18(13) (2023), e202300199.
  • Z. Li, Z. Zhou, Y. Wang, J. Wang, L. Zhou, H. Cheng, J. Yoon, Activatable nano-photosensitizers for precise photodynamic cancer therapy, Coordination Chemistry Reviews. 2023, 493.
  • A. Prieto-Castaneda, F. Garcia-Garrido, C. Diaz-Norambuena, B. Escriche-Navarro, A. Garcia-Fernandez, J. Banuclos, E. Rebollar, I. Garcia-Moreno, R. Martinez-Manez, S. de la Moya, A. Agarrabeitia, M. Ortiz, Development of geometry-controlled all-orthogonal BODIPY trimers for photodynamic therapy and phototheragnosis, Organic Letters. 24 (2022), 3636-3641.
  • L. Zhao, H. Zhou, Q. Zhou, C. Peng, T. Cheng, G. Liu, Biomimetic fluorescent probe for chiral glutamic acid in water and its application in living cell imaging, Sensors and Actuators B-Chemical. 320 (2020), 128383.
  • O. Tsay, K. Lee, D. Churchill, Selective and competitive cysteine chemosensing: resettable fluorescent "turn on" aqueous detection Cu2+ displacement and salicylaldimine hydrolysis, New Journal of Chemistry. 36 (2012), 1949-1952.
  • A. O. Özkan, H. B. Demir, Fotovoltaik Panellerde Sıcaklık ve Zenit Açısının Panel Güç Üretimine Etkisi. Necmettin Erbakan University Journal of Science and Engineering. 1(1) (2019), 1-9.
  • M. İ. Özgün, A. B. Batıbay, B. Ünal, Y. R. Eker, A. Terlemez, Investigation of the use of TiO2 obtained from endodontic NiTi Files in dye-sensitized solar cells. Necmettin Erbakan University Journal of Science and Engineering. 5(1) (2023), 1-8.
  • F. N. Arslan, İ. Varlı, Synchronous fluorescence spectroscopy method based on chemometrics: Authentication of extra virgin olive oils harvested in Mut (Mersin) region and refined edible oils. Necmettin Erbakan University Journal of Science and Engineering. 5 (2023), 278-287.
  • Y. Kubota, K. Kimura, J. Jin, K. Manseki, K. Funabiki, M. Matsui, Synthesis of near-infrared absorbing and fluorescing thiophene-fused BODIPY dyes with strong electron-donating groups and their application in dye-sensitised solar cells, New Journal of Chemistry. 43 (2019), 1156-1165.
  • K. Umezawa, A. Matsui, Y. Nakamura, D. Citterio, K. Suzuki, Bright, color-tunable fluorescent dyes in the Vis/NIR region: Establishment of new "Tailor-Made" multicolor fluorophores based on Borondipyrromethene, Chemistry-A European Journal. 15 (2009), 1096-1106.
  • L. Leonat, G. Sbârcea, I. Brânzoi, Cyclic voltammetry for energy levels estimation of organic materials, University Politehnica of Bucharest Scientific Bulletin Series B-Chemistry and Materials Science. 75 (2013), 111-118.
  • K. Umezawa, Y. Nakamura, H. Makino, D. Citterio, K. Suzuki, Bright, color-tunable fluorescent dyes in the visible-near-infrared region, Journal of the American Chemical Society. 130 (2008), 1550-1551.
There are 22 citations in total.

Details

Primary Language English
Subjects Organic Chemistry (Other)
Journal Section Articles
Authors

Yusuf Çakmak 0000-0002-2445-0538

Project Number 216Z015
Early Pub Date January 12, 2025
Publication Date
Submission Date March 2, 2024
Acceptance Date August 31, 2024
Published in Issue Year 2025 Volume: 7 Issue: 1

Cite

APA Çakmak, Y. (2025). Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds. Necmettin Erbakan Üniversitesi Fen Ve Mühendislik Bilimleri Dergisi, 7(1), 92-102.
AMA Çakmak Y. Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds. NEJSE. January 2025;7(1):92-102.
Chicago Çakmak, Yusuf. “Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds”. Necmettin Erbakan Üniversitesi Fen Ve Mühendislik Bilimleri Dergisi 7, no. 1 (January 2025): 92-102.
EndNote Çakmak Y (January 1, 2025) Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds. Necmettin Erbakan Üniversitesi Fen ve Mühendislik Bilimleri Dergisi 7 1 92–102.
IEEE Y. Çakmak, “Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds”, NEJSE, vol. 7, no. 1, pp. 92–102, 2025.
ISNAD Çakmak, Yusuf. “Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds”. Necmettin Erbakan Üniversitesi Fen ve Mühendislik Bilimleri Dergisi 7/1 (January 2025), 92-102.
JAMA Çakmak Y. Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds. NEJSE. 2025;7:92–102.
MLA Çakmak, Yusuf. “Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds”. Necmettin Erbakan Üniversitesi Fen Ve Mühendislik Bilimleri Dergisi, vol. 7, no. 1, 2025, pp. 92-102.
Vancouver Çakmak Y. Synthesis and Properties of Carboxylic Acid Functionalized Near IR Absorbing Thiophene Fused BODIPY Compounds. NEJSE. 2025;7(1):92-102.


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