Research Article

A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients

Volume: 16 Number: 2 May 24, 2026
TR EN

A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients

Abstract

Aim: Vancomycin-resistant enterococci (VRE) and carbapenem-resistant Gram-negative Bacilli (CRGNB) cause serious hospital-acquired infections. In our study, we aimed to investigate the prevalence and duration of colonization of these agents in patients with and without COVID-19.

Material and Methods: Rectal swabs of all patients hospitalized in the Intensive Care Unit (ICU) between June 2019 and December 2022 were retrospectively examined for the presence of VRE and CRGNB.

Results: Of 186 non-COVID-19 patients, VRE was detected in 37 (19.9%), and CR Klebsiella pneumoniae in one (0.5%), while no agent was found in 148 patients (79.6%). However, of 250 COVID-19 patients, VRE and CRGNB were detected together in 47 (18.8%), while VRE was positive in 32 (12.8%) and CRGNB was positive in 87 (34.8%) (p<0.05). In patients without COVID-19, VRE and CRGNB colonization times were determined as 10.5±2.11 std and 7 ± 0 std days, respectively. In COVID-19 patients, VRE colonization time was 17.05±3.50 std days and CRGNB colonization time was 13.72±3.01 days, and the time to negativity after colonization was determined as 12.26±1.52 days and 14.45±2.57 days, respectively. While the colonization time detected in COVID-19 patients was found to be significantly increased for VRE compared to those without COVID-19 patients (p=0.0002).

Conclusion: The higher rate and longer duration time of VRE and CRGNB colonization generally in patients with COVID-19 compared to those without COVID-19 suggests that this patient group should be closely monitored for possible resistant infections.

Keywords

Ethical Statement

This study was approved by the Istanbul University Faculty of Medicine Clinical Research Ethics Committee (File No: 1566574, Date: 12.01.2023).

References

  1. Suay-Garcia B, Perez-Gracia MT. Present and future of Carbapenem-resistant Enterobacteriaceae (CRE) infections. Antibiotics (Basel). 2019;8(3):122. doi:10.3390/antibiotics8030122.
  2. Orsi GB, Ciorba V. Vancomycin resistant enterococci healthcare associated infections. Ann Ig. 2013;25(6):485-92. doi:10.7416/ai.2013.1948.
  3. Raza T, Rahmat Ullah S, Mehmood K, Andleeb S. Vancomycin resistant Enterococci: a brief review. J Pak Med Assoc. 2018;68(5):768-72.
  4. Ciotti M, Angeletti S, Minieri M, Giovannetti M, Benvenuto D, Pascarella S, et al. COVID-19 outbreak: an overview. Chemotherapy. 2019;64(5-6):215-23. doi:10.1159/000507423.
  5. Zuo T, Zhang F, Lui GCY, Yeoh YK, Li AYL, Zhan H, et al. Alterations in gut microbiota of patients with COVID-19 during time of hospitalization. Gastroenterology. 2020;159(3):944-55. doi:10.1053/j.gastro.2020.05.048.
  6. Procop GW, Church DL, Hall GS, Janda WM, Koneman EW, Schreckenberger PC, Woods GL. Koneman’s color atlas and textbook of diagnostic microbiology. 7th ed. Philadelphia: Wolters Kluwer; 2017.
  7. Kumar S, Vyas A, Mehra SK. Utilization of macconkey-meropenem screening agar for the detection of carbapenem resistnant Enterobacteriaceae in a tertiary care hospital. SSRG Int J Med Sci. 2015;2(4):1-5. doi:10.14445/23939117/IJMS-V2I4P101.
  8. Clinical Laboratory Standards Institue (CLSI). Performance standards for antimicrobial susceptibility testing. 30th ed. CLSI supplement M100. Wayne, PA: Clinical and Laboratory Standards Institute; 2020.

Details

Primary Language

English

Subjects

Medical Microbiology (Other)

Journal Section

Research Article

Publication Date

May 24, 2026

Submission Date

December 20, 2024

Acceptance Date

February 2, 2026

Published in Issue

Year 2026 Volume: 16 Number: 2

APA
Gezdirici, K., & Nakipoğlu, Y. (2026). A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients. Value in Health Sciences, 16(2), 348-354. https://doi.org/10.33631/sabd.1604580
AMA
1.Gezdirici K, Nakipoğlu Y. A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients. VHS. 2026;16(2):348-354. doi:10.33631/sabd.1604580
Chicago
Gezdirici, Korhan, and Yaşar Nakipoğlu. 2026. “A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients”. Value in Health Sciences 16 (2): 348-54. https://doi.org/10.33631/sabd.1604580.
EndNote
Gezdirici K, Nakipoğlu Y (May 1, 2026) A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients. Value in Health Sciences 16 2 348–354.
IEEE
[1]K. Gezdirici and Y. Nakipoğlu, “A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients”, VHS, vol. 16, no. 2, pp. 348–354, May 2026, doi: 10.33631/sabd.1604580.
ISNAD
Gezdirici, Korhan - Nakipoğlu, Yaşar. “A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients”. Value in Health Sciences 16/2 (May 1, 2026): 348-354. https://doi.org/10.33631/sabd.1604580.
JAMA
1.Gezdirici K, Nakipoğlu Y. A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients. VHS. 2026;16:348–354.
MLA
Gezdirici, Korhan, and Yaşar Nakipoğlu. “A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients”. Value in Health Sciences, vol. 16, no. 2, May 2026, pp. 348-54, doi:10.33631/sabd.1604580.
Vancouver
1.Korhan Gezdirici, Yaşar Nakipoğlu. A Retrospective Study of Critical Resistant Bacteria in Rectal Swab Samples of COVID-19 and Non-COVID-19 Patients. VHS. 2026 May 1;16(2):348-54. doi:10.33631/sabd.1604580