Research Article
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Identification and Characterization of Yeast Diversity on Berry Surface of Kalabaki Grape Grown in Gökçeada, Çanakkale

Year 2018, Volume: 5 Issue: 4, 569 - 577, 18.10.2018
https://doi.org/10.30910/turkjans.471350

Abstract

Yeast species have important
roles in grape ripening and sweetening, formation of sugar content and the
production of many fermented products. According to the geographical position
of the vineyard and grape varieties the yeast diversity on grape berry surfaces
is variable. PCR-RFLP analysis and DNA sequencing of rDNA gene regions
(ITS1-5.8S-ITS2) were used for identification of yeast species isolated from
Kalabaki grape variety grown in Gökçeada district of Çanakkale province. Among
the identified yeast species, H. uvarum
yeast strains covered half of grape surface microbiata. The percent
distribution of other yeast species on the grape berry surface were determined
as fallows:
17.7% A. pullulans,
11.76%
C.
carpophila
, 5.88% M.
pulcherrima
, 5.88% S. bacillaris, 5.88% S.
salmonicolor
, 2.94% C. apicola ve 2.94% Z. obscura.
C. carpophila
yeast species was
identified and reported for the second time by our work on the surface of
grapes. In addition,
Z. obscura yeast species was first described
on the grape berry surface in our research. The diversity of yeast species on
Kalabaki grape berries was not various, but the rare yeast species was recorded
in yeast biota.



 

References

  • Altındişli, Ö., Özsemerci, F. 2012. Gökçeada’da Organik Üzüm Yetiştiriciliğinin Geliştirilmesi Alt Proje: Gökçeada Koşullarında Organik Üzüm Yetiştiriciliğinde Bağ Zararlılarının Yönetimi, TUBİTAK-TAGEM.
  • Amerine, M.A., Berg, H.W.,, Cruess, W.V. 1967. The Technology of Winemaking (2nd ed). The AVI Publishing Company, Inc., Connecticut.
  • Boulton, R.B., Singleton, V.L., Bisson, L.F., Kunkee, R.E. 1996. Principles and Practices of Winemaking. Chapman & Hall, New York. Carvalho, C.M., Meirinho, S., Estevinho, M.L.F., Choupina A. 2010. Yeast species associated with honey: Different identification methods. Archivos de Zootecnia, 59(225): 103-113.
  • Diba, K., Namaki, A., Ayatolahi, H., Hanifian, H. 2012. Rapid identification of drug resistant Candida species causing recurrent vulvovaginal candidiasis. Medical Mycology Journal, 53: 193–198.
  • Drumonde-Neves, J., Franco-Duarte, R., Lima, T., Schuller, D., Pais, C. 2017. Association between grape yeast communities and the vineyard ecosystems. PLoS One. 12(1): e0169883.
  • FAO-OIV Focus, 2016. Table and Dried grapes. http://www.fao.org/3/a-i7042e.pdf (Erişim tarihi: 05.07.2018).
  • Fleet, G.H. 1993. The Microorganisms of Winemaking – Isolation, Enumeration and Identification. “Alınmıştır: Wine Microbiology and Biotechnology (ed) Fleet, G.H. Harwood Academic Publishers, Switzerland, 1-25.
  • Fleet, G.H., Heard, G.M. 1993. Yeasts Growth During Fermentation. “Alınmıştır: Wine Microbiology and Biotechnology (ed) Fleet, G.H., Harwood Academic Publishers, Switzerland, 27-54.
  • Fleet, G.H. 2007. Wine. “Alınmıştır: Food microbiology: Fundamentals and Frontiers (3rd ed.) (ed) Doyle, M.P. ve Beuchat, L.R., Washington, DC: ASM Press, 863-890.
  • Fleet, G.H. 2008. Wine yeasts for the future. FEMS Yeast Research, 8: 979-995.
  • Fugelsang, K.C., Edwards, C.G. 2007. Wine Microbiology: Practical Applications and Procedures. New York, NY: Springer, 394 s.
  • Humphries, Z., Seifert, K.A., Hirooka, Y., Visagie, C.M. 2017. A new family and genus in Dothideales for Aureobasidium-like species isolated from house dust. Ima Fungus, 8(2): 299-315.
  • Jolly, N.P., Augustyn, O.P.H., Pretorius I.S. 2003. The effect of non-Saccharomyces yeasts on fermentation and wine quality. South African Journal of Enology and Viticulture, 24: 55-62.
  • Jolly, N.P., Augustyn O.P.H., Pretorius I.S. 2006. The role and use of non-Saccharomyces yeasts in wine production. South African Journal for Enology and Viticulture 27: 15-39.
  • Kristjuhan, A., Lõoke, M., Kristjuhan K. 2011. Extraction of genomic DNA from yeasts for PCR-based applications. Biotechniques, 50(5): 325-328.
  • Lachance, M.A., Starmer W.T. 1998. Ecology and Yeasts. “Alınmıştır: The Yeasts, a Taxonomic Study, (4th ed.) (ed.) Kurtzman, C. P., J.W., Elsevier, Amsterdam, Netherlands, 21-30.
  • Longo, E., Cansado, J., Agrelo, D., Villa, T.G. 1991. Effect of climatic conditions on yeast diversity in grape musts from Northwest Spain. American Journal of Enology and Viticulture, 42: 141-144.
  • Mac Neil, K. 2015. The Wine Bible. New York: Workman Publishing, 1008 s.
  • Martini, A., Ciani, M., Scorzetti, G. 1996. Direct enumeration and isolation of wine yeasts from grape surfaces. American Journal of Enology and Viticulture, 47: 435-440.
  • Mortimer, P., Polsinelli, M. 1999. On the origins of wine yeast. Research in Microbiology, 68: 4884–4893.
  • Nurgel, C., Erten, H., Canbaş, A., Cabaroğlu, T., Selli, S. 2005. Yeast flora during the fermentation of wines made from Vitis vinifera L. cv. Emir and Kalecik Karası grown in Anatolia. World Journal of Microbiology and Biotechnology, 21:1187-1194.
  • OIV, 2017. 2017 World Vitiviniculture Situation; OIV Statistical Report on World Vitiviniculture. file:///C:/Users/TTG/Desktop/cagla%20paper/oiv-en-bilan-2017.pdf (Erişim tarihi: 05.07.2018).
  • Özçelik, F., Dönmez, S. 1993. Killer yeasts and the determination of killer characters of some yeasts. Doğa- Turkish Journal of Biology, 17:1-4.
  • Özçelik, F., Türkmen, U., Ateş, S. 1996. Farklı bölgelerden izole edilen şarap mayalarının killer özelliklerinin belirlenmesi. Turkish Journal of Biology, 20(3): 241-249.
  • Prakitchaiwattana, C.J., Fleet, G.H., Heard G.H. 2004. Application and evaluation of denaturing gradient gel electrophoresis to analyse the yeast ecology of wine grapes. FEMS Yeast Research, 4: 865-877.
  • Pretorius, I.S. 2000. Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking. Yeast, 16: 675-729.
  • Querol, A., Jiménez, M., Huerta, T. 1990. Microbiological and enological parameters during fermentation of musts from poor and normal grape harvests in the region of Alicante (Spain). Journal of Food Sciences, 55: 1603-1606.
  • Ribéreau-Gayon, P., Dubourdieu, D., Donèche, B., Lonvaud, A. (Eds.) 2000. Cytology, Taxonomy and Ecology of Grape and Wine Yeast. “Alınmıştır: Handbook of Enology, John Wiley and Sons, West Sussex, England, 1-49.
  • Schütz, M., Gafner, J. 1993. Analysis of yeast diversity during spontaneous and induced alcoholic fermentations. Journal of Applied Bacteriology, 75:551-558.
  • Turgut Genç, T. ve Çıldır, İ. 2012. bozcaada üzüm çeşitleri üzerinde non-Saccharomyces mayaların dağılımı. Biyoloji Bilimleri Araştırma Dergisi, 5 (1): 115-120.
  • TÜİK, 2017. Haber Bülteni. Bitkisel Üretim İstatistikleri. Sayı 24581, http://www.tuik.gov.tr/PreHaberBultenleri.do?id=24581 (Erişim tarihi: 05.07.2018).
  • White, T.J., Bruns, T., Lee, S., Taylor J. 1990. Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics. “Alınmıştır: PCR Protocols: A Guide to Methods and Applications (ed) Innis, M.A., Gelfand, D.H., Sninsky, J.J. ve White, T.J., Academic Press, San Diego, California, USA, 315-322.

Çanakkale Gökçeada'da Yetiştirilen Kalabaki Üzümünün Tane Yüzeyindeki Maya Çeşitliliğinin Tanımlanması ve Karakterizasyonu

Year 2018, Volume: 5 Issue: 4, 569 - 577, 18.10.2018
https://doi.org/10.30910/turkjans.471350

Abstract

Üzümlerin olgunlaşmasında,
tatlanmasında, şeker içeriğinin oluşmasında ve birçok fermente ürünün elde
edilmesinde maya türlerinin önemli görevleri bulunmaktadır. Bağ alanının
coğrafik konumuna ve üzüm çeşidine göre üzüm yüzeyinin maya çeşitliliği
değişkendir. Çanakkale ilinin Gökçeada ilçesinde yetiştirilen Kalabaki üzümünün
barındırdığı maya çeşitliliği rDNA
gen bölgelerinin (ITS1-5.8S-ITS2) PCR-RFLP ve DNA dizi analizleri
yapılarak belirlendi. Tanımlanan maya türlerinden H. uvarum maya türünün maya
mikrobiyotasının yarısına hâkim olduğu, diğer maya türlerinin üzüm yüzeyinde
dağılımlarının ise
%17,7 A. pullulans, %11,76 C. carpophila, %5,88 M. pulcherrima,
%5,88 S. bacillaris, %5,88 S. salmonicolor, %2,94
C. apicola ve %2,94 Z. obscura

olduğu tespit edildi. Çalışmamız ile
Z.
obscura
maya türü ilk
defa, C. carpophila maya türü ise ikinci kez üzüm yüzeyinde tanımlandı.
Kalabaki üzümünün tane yüzeyinde maya çeşitliliği fazla olmamakla beraber
değişken türleri barındırdığı belirlendi.

References

  • Altındişli, Ö., Özsemerci, F. 2012. Gökçeada’da Organik Üzüm Yetiştiriciliğinin Geliştirilmesi Alt Proje: Gökçeada Koşullarında Organik Üzüm Yetiştiriciliğinde Bağ Zararlılarının Yönetimi, TUBİTAK-TAGEM.
  • Amerine, M.A., Berg, H.W.,, Cruess, W.V. 1967. The Technology of Winemaking (2nd ed). The AVI Publishing Company, Inc., Connecticut.
  • Boulton, R.B., Singleton, V.L., Bisson, L.F., Kunkee, R.E. 1996. Principles and Practices of Winemaking. Chapman & Hall, New York. Carvalho, C.M., Meirinho, S., Estevinho, M.L.F., Choupina A. 2010. Yeast species associated with honey: Different identification methods. Archivos de Zootecnia, 59(225): 103-113.
  • Diba, K., Namaki, A., Ayatolahi, H., Hanifian, H. 2012. Rapid identification of drug resistant Candida species causing recurrent vulvovaginal candidiasis. Medical Mycology Journal, 53: 193–198.
  • Drumonde-Neves, J., Franco-Duarte, R., Lima, T., Schuller, D., Pais, C. 2017. Association between grape yeast communities and the vineyard ecosystems. PLoS One. 12(1): e0169883.
  • FAO-OIV Focus, 2016. Table and Dried grapes. http://www.fao.org/3/a-i7042e.pdf (Erişim tarihi: 05.07.2018).
  • Fleet, G.H. 1993. The Microorganisms of Winemaking – Isolation, Enumeration and Identification. “Alınmıştır: Wine Microbiology and Biotechnology (ed) Fleet, G.H. Harwood Academic Publishers, Switzerland, 1-25.
  • Fleet, G.H., Heard, G.M. 1993. Yeasts Growth During Fermentation. “Alınmıştır: Wine Microbiology and Biotechnology (ed) Fleet, G.H., Harwood Academic Publishers, Switzerland, 27-54.
  • Fleet, G.H. 2007. Wine. “Alınmıştır: Food microbiology: Fundamentals and Frontiers (3rd ed.) (ed) Doyle, M.P. ve Beuchat, L.R., Washington, DC: ASM Press, 863-890.
  • Fleet, G.H. 2008. Wine yeasts for the future. FEMS Yeast Research, 8: 979-995.
  • Fugelsang, K.C., Edwards, C.G. 2007. Wine Microbiology: Practical Applications and Procedures. New York, NY: Springer, 394 s.
  • Humphries, Z., Seifert, K.A., Hirooka, Y., Visagie, C.M. 2017. A new family and genus in Dothideales for Aureobasidium-like species isolated from house dust. Ima Fungus, 8(2): 299-315.
  • Jolly, N.P., Augustyn, O.P.H., Pretorius I.S. 2003. The effect of non-Saccharomyces yeasts on fermentation and wine quality. South African Journal of Enology and Viticulture, 24: 55-62.
  • Jolly, N.P., Augustyn O.P.H., Pretorius I.S. 2006. The role and use of non-Saccharomyces yeasts in wine production. South African Journal for Enology and Viticulture 27: 15-39.
  • Kristjuhan, A., Lõoke, M., Kristjuhan K. 2011. Extraction of genomic DNA from yeasts for PCR-based applications. Biotechniques, 50(5): 325-328.
  • Lachance, M.A., Starmer W.T. 1998. Ecology and Yeasts. “Alınmıştır: The Yeasts, a Taxonomic Study, (4th ed.) (ed.) Kurtzman, C. P., J.W., Elsevier, Amsterdam, Netherlands, 21-30.
  • Longo, E., Cansado, J., Agrelo, D., Villa, T.G. 1991. Effect of climatic conditions on yeast diversity in grape musts from Northwest Spain. American Journal of Enology and Viticulture, 42: 141-144.
  • Mac Neil, K. 2015. The Wine Bible. New York: Workman Publishing, 1008 s.
  • Martini, A., Ciani, M., Scorzetti, G. 1996. Direct enumeration and isolation of wine yeasts from grape surfaces. American Journal of Enology and Viticulture, 47: 435-440.
  • Mortimer, P., Polsinelli, M. 1999. On the origins of wine yeast. Research in Microbiology, 68: 4884–4893.
  • Nurgel, C., Erten, H., Canbaş, A., Cabaroğlu, T., Selli, S. 2005. Yeast flora during the fermentation of wines made from Vitis vinifera L. cv. Emir and Kalecik Karası grown in Anatolia. World Journal of Microbiology and Biotechnology, 21:1187-1194.
  • OIV, 2017. 2017 World Vitiviniculture Situation; OIV Statistical Report on World Vitiviniculture. file:///C:/Users/TTG/Desktop/cagla%20paper/oiv-en-bilan-2017.pdf (Erişim tarihi: 05.07.2018).
  • Özçelik, F., Dönmez, S. 1993. Killer yeasts and the determination of killer characters of some yeasts. Doğa- Turkish Journal of Biology, 17:1-4.
  • Özçelik, F., Türkmen, U., Ateş, S. 1996. Farklı bölgelerden izole edilen şarap mayalarının killer özelliklerinin belirlenmesi. Turkish Journal of Biology, 20(3): 241-249.
  • Prakitchaiwattana, C.J., Fleet, G.H., Heard G.H. 2004. Application and evaluation of denaturing gradient gel electrophoresis to analyse the yeast ecology of wine grapes. FEMS Yeast Research, 4: 865-877.
  • Pretorius, I.S. 2000. Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking. Yeast, 16: 675-729.
  • Querol, A., Jiménez, M., Huerta, T. 1990. Microbiological and enological parameters during fermentation of musts from poor and normal grape harvests in the region of Alicante (Spain). Journal of Food Sciences, 55: 1603-1606.
  • Ribéreau-Gayon, P., Dubourdieu, D., Donèche, B., Lonvaud, A. (Eds.) 2000. Cytology, Taxonomy and Ecology of Grape and Wine Yeast. “Alınmıştır: Handbook of Enology, John Wiley and Sons, West Sussex, England, 1-49.
  • Schütz, M., Gafner, J. 1993. Analysis of yeast diversity during spontaneous and induced alcoholic fermentations. Journal of Applied Bacteriology, 75:551-558.
  • Turgut Genç, T. ve Çıldır, İ. 2012. bozcaada üzüm çeşitleri üzerinde non-Saccharomyces mayaların dağılımı. Biyoloji Bilimleri Araştırma Dergisi, 5 (1): 115-120.
  • TÜİK, 2017. Haber Bülteni. Bitkisel Üretim İstatistikleri. Sayı 24581, http://www.tuik.gov.tr/PreHaberBultenleri.do?id=24581 (Erişim tarihi: 05.07.2018).
  • White, T.J., Bruns, T., Lee, S., Taylor J. 1990. Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics. “Alınmıştır: PCR Protocols: A Guide to Methods and Applications (ed) Innis, M.A., Gelfand, D.H., Sninsky, J.J. ve White, T.J., Academic Press, San Diego, California, USA, 315-322.
There are 32 citations in total.

Details

Primary Language Turkish
Journal Section Research Articles
Authors

Tülay Turgut Genç

Çağla Çakaloğlu This is me

Publication Date October 18, 2018
Submission Date July 25, 2018
Published in Issue Year 2018 Volume: 5 Issue: 4

Cite

APA Turgut Genç, T., & Çakaloğlu, Ç. (2018). Çanakkale Gökçeada’da Yetiştirilen Kalabaki Üzümünün Tane Yüzeyindeki Maya Çeşitliliğinin Tanımlanması ve Karakterizasyonu. Türk Tarım Ve Doğa Bilimleri Dergisi, 5(4), 569-577. https://doi.org/10.30910/turkjans.471350