Research Article
BibTex RIS Cite

Year 2025, Volume: 35 Issue: 2, 369 - 380, 30.06.2025
https://doi.org/10.29133/yyutbd.1646487

Abstract

References

  • Adams, M., Christian, P., Ghabrial, S., & Knowles, N. (2012). The viruses. In A. M. Q. King, M. J. Adams, E. B. Carstens & E. J. Lefkowitz (Eds.), Virus taxonomy: classification and nomenclature of viruses: ninth report of the international committee on taxonomy of viruses (pp. 21-36). Elsevier, Academic Press, London.
  • Akhter, A., Qazi, J., Saeed, M., & Mansoor, S. (2009). A severe leaf curl disease on chilies in Pakistan is associated with multiple begomovirus components. Plant Disease, 93(9), 962–962. https://doi.org/10.1094/PDIS-93-9-0962B
  • Ali, A. (2023). Single-stranded RNA viruses infecting cucurbits. In R. K. Gaur, B. L. Patil & R. Selvarajan (Eds.), Plant RNA Viruses (pp. 39–56). Academic Press. https://doi.org/10.1016/B978-0-323-95339-9.00027-2
  • Berger, P. H., Adams, M. J., Barnett, O. W., Brunt, A. A., Hammond, J., Hill, J. H., Jordan, R. L., Kashiwazaki, S., Rybicki, E., mSpence, N., Stenger, D. C., Ohki, S. T., Uyeda, I., van Jaayen, A., Valkonen, J., & Vetten, H. J. (2005). Potyviridae. In C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball (Eds.), Virus taxonomy: VIIIth report of the international committee on taxonomy of viruses. Elsevier, Academic Press, London.
  • Cai, L., Mei, Y., Ye, R., Deng, Y., Zhang, X., Hu, Z., Zhou, X., Zhang, M., & Yang, J. (2023). Tomato leaf curl New Delhi virus: an emerging plant begomovirus threatening cucurbit production. aBIOTECH, 4(3), 257-266. https://doi.org/10.1007/s42994-023-00118-4
  • De Moya-Ruiz, C., Gómez, P., & Juárez, M. (2023). Occurrence, distribution, and management of aphid-transmitted viruses in cucurbits in Spain. Pathogens, 12, 422. https://doi.org/10.3390/pathogens12030422
  • De Moya-Ruiz, C., Rabadán, P., Juárez, M., Gómez, P. (2021). Assessment of the current status of potyviruses in watermelon and pumpkin crops in Spain: epidemiological impact of cultivated plants and mixed infections. Plants, 10, 138. https://doi.org/10.3390/plants10010138
  • Desbiez, C. (2020). The never-ending story of cucurbits and viruses. Acta Horticulturae, 1294, 173-192. https://doi.org/10.17660/ActaHortic.2020.1294.23
  • Devendran, R., Kumar, M., Ghosh, D., Yogindran, S., Karim, M. J., & Chakraborty, S. (2022). Capsicum-infecting begomoviruses as global pathogens: host–virus interplay, pathogenesis, and management. Trends in Microbiology, 30(2), 170-184, https://doi.org/10.1016/j.tim.2021.05.007
  • Di Serio, F., Li, S. F., Pallás, V., Owens, R. A., Randles, J. W., Sano, T., Verhoeven, J. T., Vidalakis, G., & Flores, R. (2017). Viroid taxonomy. In A. Hadidi, R. Flores, P. Palukaitis & J. Randles (Eds.), Viroids and Satellites (pp. 135–146). Academic Press: Cambridge, MA, USA. https://doi.org/10.1016/B978-0-12-801498-1.00013-9
  • Díaz-Pendón, J. A., Fernández-Muñoz, R., Gómez-Guillamón, M. L., & Moriones, E. (2005). Inheritance of resistance to watermelon mosaic virus in Cucumis melo that impairs virus accumulation, symptom expression, and aphid transmission. Phytopathology, 95(7), 840–846. https://doi.org/10.1094/PHYTO-95-0840
  • FAO (2022). FAOSTAT Statistical Database. https://www.fao.org/faostat/en/#data/QCL
  • Fauquet, C. M., Mayo, M. A., Maniloff, J., Desselberger, U., & Ball, L. A. (2005). International committee on taxonomy of viruses and the 3,142 unassigned species. Virology Journals, 16(2). https://doi.org/10.1186/1743-422X-2-64
  • Ferriol, M., & Picó, B. (2008). Pumpkin and winter squash. In J. Prohens & F. Nuez (Eds.), Vegetables I (pp. 317–349). Springer. https://doi.org/10.1007/978-0-387-30443-4_10
  • Fidan, H., Yildiz, K., Sarikaya, P., & Calis, O. (2023). First report of Tomato leaf curl New Delhi virus in Türkiye. New Disease Reports, 47, e12180. https://doi.org/10.1002/ndr2.12180
  • Güller, A., Usta, M., Korkmaz, G., & Demirel, S. (2024). First report of natural infection of watermelon mosaic virus (WMV) infecting bottle gourd and snake melon. Journal of Tekirdag Agricultural Faculty, 21(1), 206-218. https://doi.org/10.33462/jotaf.1260007
  • Hussain, M., Mansoor, S., Iram, S., Zafar, Y., & Briddon, R.W. (2004). First report of Tomato leaf curl New Delhi virus affecting chilli pepper in Pakistan. Plant Pathology, 9(20). https://doi.org/10.1111/j.1365-3059.2004.01073.x
  • Juárez, M., Tovar, R., Fiallo-Olivé, E., Aranda, M. A., Gosálvez, B., Castillo, P., Moriones, E., & Navas-Castill, J. (2014). First detection of tomato leaf curl New Delhi virus infecting zucchini in Spain. Plant Disease, 98(6), 857. https://doi.org/10.1094/PDIS-10-13-1050-PDN
  • Keyata, T., Sinhabandhu, S., & Reanwarakorn, K. (2024). Symptoms and disease virulence assessment in commercial pepper cultivars caused by pepper chat fruit viroid. Journal of Plant Diseases and Protection, 131, 1935–1944. https://doi.org/10.1007/s41348-024-00943-9
  • Kil, E., Vo, T. T., Fadhila, C., Ho, P. T., Lal, A., Troiano, E., Parrella, G., & Lee, S. (2020). Seed transmission of tomato leaf curl New Delhi virus from zucchini squash in Italy. Plants, 9(5), 563. https://doi.org/10.3390/plants9050563
  • Kumar, R.V. (2019). Plant antiviral immunity against geminiviruses and viral counter-defense for survival. Frontiers in Microbiology, 10, 1460. https://doi.org/10.3389/fmicb.2019.01460
  • Kumar, S., Stecher, G., & Tamura, K. (2016). MEGA7: Molecular evolu‐tionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870–1874.
  • Lecoq, H. (2003). Cucurbits. In G. Loebenstein & G. Thottapilly (Eds.), Virus and virus-like diseases of major crops in developing countries (pp. 665–688). Dordrecht, The Netherlands: Kluwer Academic Publishers. https://doi.org/10.1007/978-94-007-0791-7_26
  • Lecoq, H., & Desbiez, C. (2012). Viruses of cucurbit crops in the mediterranean region: an ever-changing picture. Advances in Virus Research, 84, 67–126. https://doi.org/10.1016/B978-0-12-394314-9.00003-8
  • Lecoq, H., & Katis, N. (2014). Control of cucurbit viruses. Advances in Virus Research, 90, 255–296. https://doi.org/10.1016/B978-0-12-801246-8.00005-6
  • Lecoq, H., Dafalla, G., & Desbiez, C. (2001). Biological and molecular characterization of Morrocan watermelon mosaic virus and a potyvirus isolate from eastern Sudan. Plant Disease, 85, 547–552. https://doi.org/10.1094/PDIS.2001.85.5.547
  • Lemmetty, A., Werkman, A.W., & Soukainen, M. (2011). First report of hop stunt viroid in greenhouse cucumber in Finland. Plant Disease, 95(5), 615. https://doi.org/ 10.1094/PDIS-12-10-0923
  • Li, R., Mock, R., Huang, Q., Abad, J., Hartung, J., & Kinard, G. (2008). A reliable and inexpensive method of nucleic acid extraction for the PCR-based detection of diverse plant pathogens. Journal of Virological Methods, 154, 48-55. https://doi.org/10.1016/j.jviromet.2008.09.008
  • Lopez, C., Ferriol, M., & Pico, M. (2015). Mechanical transmission of tomato leaf curl New Delhi virus to cucurbit germplasm: selection of tolerance sources in Cucumis melo. Euphytica, 204, 679–91. https://doi.org/10.1007/s10681-015-1371-x
  • Malathi, V. G., Renukadevi, P., Chakraborty, S., Biswas, K. K., Roy, A., Sivalingam, P. N., Venkataravanappa, V., & Mandal, B. (2017). Begomoviruses and their satellites occurring in india: distribution, diversity and pathogenesis. In B. Mandal, G. Rao, V. Baranwal & R. Jain (Eds.), A Century of Plant Virology (pp. 75–177). Springer. https://doi.org/10.1007/978-981-10-5672-7_5
  • Matsushita, Y., Yanagisawa, H., & Sano, T. (2018). Vertical and horizontal transmission of pospiviroids. Viruses, 10(12), 706. https://doi.org/10.3390/v10120706
  • McLeish, M., Sacristan, S., Fraile, A. & Garcia-Arenal, F. (2017). Scale dependencies and generalism in host use shape virus prevalence. Proceedings of the Royal Society Biological Sciences, 284. https://doi.org/10.1098/rspb.2017.2066
  • Mishra, R., Verma, R. K., Sharma, P., Choudhary, D. K., & Gaur, R. K. (2013). Interaction between viral proteins with the transmission of Potyvirus. Archives of Phytopathology and Plant Protection, 47(2), 240–253. https://doi.org/10.1080/03235408.2013.807659
  • Moreno, I. M., Malpica, J. M., Diaz-Pendon, J. A., Moriones, E., Fraile, A., & Garcia-Arenal, F. (2004). Variability and genetic structure of the population of watermelon mosaic virus infecting melon in Spain. Virology, 318, 451–460. https://doi.org/10.1016/j.virol.2003.10.002
  • Moriones, E., Praveen, S., & Chakraborty, S. (2017). Tomato leaf curl New Delhi virus: an emerging virus complex threatening vegetable and fiber crops. Viruses, 9(10), 264. https://doi.org/ 10.3390/v9100264
  • Moury, B., & Desbiez, C. (2020). Host range evolution of potyviruses: a global phylogenetic analysis. Viruses, 12(1), 111. https://doi.org/10.3390/v12010111
  • Muhire, B. M., Varsani, A., & Martin, D. P. (2014). SDT: A virus classification tool based on pairwise sequence alignment and identity calculation. PLoS ONE, 9, e108277. https://doi.org/10.1371/journal.pone.0108277
  • Nematollahi, S., Panahborhani, N., Koolivand, D. (2021). Molecular characterization and population evolution analysis of watermelon mosaic virus isolates on cucurbits of Northwest Iran. 3 Biotech, 11(2). https://doi.org/10.1007/s13205-020-02609-3
  • Panno, S., Iacono, G., Davino, M., Marchione, S., Zappardo, Z., Bella, P., Tomassoli, L., Accotto, G. P., & Davino, S. (2016). First report of tomato leaf curl New Delhi virus affecting zucchini squash in an important horticultural area of southern Italy. New Disease Reports, 33(6). https://doi.org/10.5197/j.2044-0588.2016.033.006
  • Pérez-de-Castro, A., Martínez de Alba, A.E., Sáez, C., Flores, A., Sifres, A., Gómez-Guillamón, M.L., López, C., & Picó, B. (2020). Incidence and genetic diversity of cucurbit viruses in Spain. Acta Horticulturae, 1294, 203–210. https://doi.org/10.17660/ActaHortic.2020.1294.25
  • Reanwarakorn, K., Klinkong, S., & Porsoongnurn, J. (2011). First report of natural infection of pepper chat fruit viroid in tomato plants in Thailand. New Disease Reports, 24(6). http://dx.doi.org/10.5197/j.2044-0588.2011.024.006
  • Sano, T. (2003). Hop stunt viroid. In A.Hadidi, R. Flores, J. W. Randles & J. S. Semancik (Eds.), Viroids (pp. 207-212). Collingwood, Australia: CSIRO Publishing.
  • Sastry, K. S., Mandal, B., Hammond, J., Scott, S. W., & Briddon, R. W. (2019). Encyclopedia of plant viruses and viroids. Springer, New Delhi. https://doi.org/10.1007/978-81-322-3912-3
  • Sharma, P. (2023). Epidemiology of potyviruses infecting crops of cucurbitaceae. In R. K. Gaur, B. L. Patil & R. Selvarajan (Eds.), Plant RNA Viruses (213-227). Academic Press. https://doi.org/10.1016/B978-0-323-95339-9.00016-8
  • Sharma, P., Sahu, A. K., Verma, R. K., Mishra, R., Choudhary, D. K., & Gaur, R. K. (2013). Current status of Potyvirus in India. Archives of Phytopathology and Plant Protection, 47(8), 906–918. https://doi.org/10.1080/03235408.2013.825963
  • Siskos, L., Cui, L., Wang, C., Visser, R. G. F., Bai, Y. L., & Schouten, H. J. (2022). A new challenge in melon resistance breeding: the ToLCNDV case. Euphytica, 218(9). https://doi: 10.1007/s10681-022-03081-1
  • Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994). CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight. Nucleic Acids Research, 22(22), 4673-4680. https://doi: 10.1093/nar/22.22.4673
  • Thompson, W. M. O. (2011). Introduction: whiteflies, geminiviruses and recent events. In W. Thompson (Ed.), The whitefly, Bemisia tabaci (Homoptera: Aleyrodidae) interaction with Geminivirus-infected host plants. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-1524-0_1
  • Troiano, E., & Parrella, G. (2023). First report of tomato leaf curl New Delhi virus in Lagenaria siceraria var. longissima in Italy. Phytopathologia Mediterranea, 62(1), 25-28. https://doi: 10.36253/phyto-14147
  • Venkataravanappa, V., Ashwathappa, K. V., Reddy, C. N. L., Shankarappa, K. S., & Reddy, M. K. (2020). Characterization of tomato leaf curl New Delhi virus associated with leaf curl and yellowing disease of watermelon and development of LAMP assay for its detection. 3 Biotech, 10, 282. https://doi.org/10.1007/s13205-020-02245-x
  • Verhoeven, J. T. J., Jansen, C. C. C. , Roenhorst, J. W., Flores, R., & De La Peña, M. (2009). Pepper chat fruit viroid: biological and molecular properties of a proposed new species of the genus pospiviroid. Virus Research, 144, 209–214. https://doi.org/10.1016/j.virusres.2009.05.002
  • Verhoeven, J. T. J., Jansen, C. C. C., Willemen, T. M., Kox, L. F. F., Owens, R. A., & Roenhorst, J. W. (2004). Natural infections of tomato by citrus exocortis viroid, columnea latent viroid, potato spindle tuber viroid and tomato chlorotic dwarf viroid. European Journal of Plant Pathology, 110(8), 823-31. https://doi.org/10.1007/s10658-004-2493-5
  • Walker, P. J., Siddell, S. G., Lefkowitz, E. J., Mushegian, A. R., Adriaenssens, E. M., Alfenas-Zerbini P., Davison, A. J., Dempsey, D. M., Dutilh, B. E., García, M. L., Harrach, B., Harrison, R. L., Hendrickson, R. C., Junglen, S., Knowles, N. J., Krupovic, M., Kuhn, J. H., Lambert, A. J., Łobocka, M., Nibert, M. L., Oksanen, H. M., Orton, R. J., Robertson, D. L., Rubino, L., Sabanadzovic, S., Simmonds, P., Smith, D. B., Suzuki, N., Van Dooerslaer, K., Vandamme, A. M., Varsani, A., & Zerbini, F. M. (2021). Changes to virus taxonomy and to the international code of virus classification and nomenclature ratified by the international committee on taxonomy of viruses (2021). Archieves of Virology, 166(9), 2633–2648. https://doi.org/10.1007/s00705-021-05156-1
  • Yanagisawa, H., & Matsushita, Y. (2017). Host ranges and seed transmission of tomato planta macho viroid and pepper chat fruit viroid. European Journal of Plant Pathology, 149 (1), 211–217. https://doi.org/10.1007/s10658-017-1160-6
  • Yazdani-Khameneh, S., Aboutorabi, S., Shoori, M., Aghazadeh, A., Jahanshahi, P., Golnaraghi, A., & Maleki, M. (2016). Natural Occurrence of tomato leaf curl new delhi virus in iranian cucurbit crops. The Plant Pathology Journal, 32(3), 201. https://doi: 10.5423/PPJ.OA.10.2015.0210
  • Yeşil, S. (2019). Some virus diseases of edible seed squash (Cucurbita pepo L.) in Aksaray Province, Turkey. Yuzuncu Yıl University Journal of Agricultural Sciences, 29, 63-71. https://doi.org/10.29133/yyutbd.476052
  • Zerbini, F. M., Briddon, R. W., Idris, A., Martin, D. P., Moriones, E., Navas-Castillo, J., Rivera-Bustamante, R., Roumagnac, P., & Varsani, A. (2017). Consortium, I.R. ICTV virus taxonomy profile: Geminiviridae. Journal of General Virology, 98(2), 131–133. https://doi.org/10.1099/jgv.0.000738
  • Zhao, X., Tan, Z., Feng, H., Yang, R., Li, M., Jiang, J., Shen,G., & Yu, R. (2011). Microsatellites in different Potyvirus genomes: survey and analysis. Gene, 488, 52-56. https://doi.org/10.1016/j.gene.2011.08.016
  • Zheng, L., Rodonibc, B. C., Gibbs, M. J., & Gibbs, A. J. (2010). A novel pair of universal primers for the detection of potyviruses. Plant Pathology, 59(2), 211-220. https://doi.org/10.1111/j.1365-3059.2009.02201.x

Investigation of Virus and Viroid Diseases in Cucurbits

Year 2025, Volume: 35 Issue: 2, 369 - 380, 30.06.2025
https://doi.org/10.29133/yyutbd.1646487

Abstract

Cucurbita species are economically important vegetables, with Türkiye ranking second in the world for gherkin and cucumber production and sixth for pumpkin and squash production. However, diseases caused by viruses are a threat to global cucurbit production. Due to global warming, changes in agricultural practices, and advancements in virus detection, the number of viruses infecting cucurbits has significantly increased in recent years. In this study, to identify causal viruses (potyviruses and begomoviruses) and viroids (pospiviroids) that induced symptoms on cucurbits, leaves exhibiting virus-like symptoms were surveyed and collected from cultivation areas in Türkiye from July to September 2024, and subjected to detection of causal agents. A total of 150 plant samples were collected from three locations, with plants randomly selected and viral infection symptoms observed. RT-PCR assays for potyviruses identified watermelon mosaic virus (WMV) in 30 samples (20%), which included 11 snake melon, 3 pumpkin, and 16 zucchini samples. Additionally, PCR assays for pospiviroids successfully detected pepper chat fruit viroid (PCFVd) in six samples, including zucchini and snake melon. Amplified products of the expected size were sequenced and showed identities of over 95% with PCFVd isolates in NCBI. This study reports for the first time the identification of zucchini and snake melon as natural hosts of PCFVd.

Supporting Institution

This study was partially supported by the Research Fund of Kahramanmaraş Sütçü Imam University (2023/6-20 M), and the Scientific and Technological Research Council of Turkey (124O343).

References

  • Adams, M., Christian, P., Ghabrial, S., & Knowles, N. (2012). The viruses. In A. M. Q. King, M. J. Adams, E. B. Carstens & E. J. Lefkowitz (Eds.), Virus taxonomy: classification and nomenclature of viruses: ninth report of the international committee on taxonomy of viruses (pp. 21-36). Elsevier, Academic Press, London.
  • Akhter, A., Qazi, J., Saeed, M., & Mansoor, S. (2009). A severe leaf curl disease on chilies in Pakistan is associated with multiple begomovirus components. Plant Disease, 93(9), 962–962. https://doi.org/10.1094/PDIS-93-9-0962B
  • Ali, A. (2023). Single-stranded RNA viruses infecting cucurbits. In R. K. Gaur, B. L. Patil & R. Selvarajan (Eds.), Plant RNA Viruses (pp. 39–56). Academic Press. https://doi.org/10.1016/B978-0-323-95339-9.00027-2
  • Berger, P. H., Adams, M. J., Barnett, O. W., Brunt, A. A., Hammond, J., Hill, J. H., Jordan, R. L., Kashiwazaki, S., Rybicki, E., mSpence, N., Stenger, D. C., Ohki, S. T., Uyeda, I., van Jaayen, A., Valkonen, J., & Vetten, H. J. (2005). Potyviridae. In C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball (Eds.), Virus taxonomy: VIIIth report of the international committee on taxonomy of viruses. Elsevier, Academic Press, London.
  • Cai, L., Mei, Y., Ye, R., Deng, Y., Zhang, X., Hu, Z., Zhou, X., Zhang, M., & Yang, J. (2023). Tomato leaf curl New Delhi virus: an emerging plant begomovirus threatening cucurbit production. aBIOTECH, 4(3), 257-266. https://doi.org/10.1007/s42994-023-00118-4
  • De Moya-Ruiz, C., Gómez, P., & Juárez, M. (2023). Occurrence, distribution, and management of aphid-transmitted viruses in cucurbits in Spain. Pathogens, 12, 422. https://doi.org/10.3390/pathogens12030422
  • De Moya-Ruiz, C., Rabadán, P., Juárez, M., Gómez, P. (2021). Assessment of the current status of potyviruses in watermelon and pumpkin crops in Spain: epidemiological impact of cultivated plants and mixed infections. Plants, 10, 138. https://doi.org/10.3390/plants10010138
  • Desbiez, C. (2020). The never-ending story of cucurbits and viruses. Acta Horticulturae, 1294, 173-192. https://doi.org/10.17660/ActaHortic.2020.1294.23
  • Devendran, R., Kumar, M., Ghosh, D., Yogindran, S., Karim, M. J., & Chakraborty, S. (2022). Capsicum-infecting begomoviruses as global pathogens: host–virus interplay, pathogenesis, and management. Trends in Microbiology, 30(2), 170-184, https://doi.org/10.1016/j.tim.2021.05.007
  • Di Serio, F., Li, S. F., Pallás, V., Owens, R. A., Randles, J. W., Sano, T., Verhoeven, J. T., Vidalakis, G., & Flores, R. (2017). Viroid taxonomy. In A. Hadidi, R. Flores, P. Palukaitis & J. Randles (Eds.), Viroids and Satellites (pp. 135–146). Academic Press: Cambridge, MA, USA. https://doi.org/10.1016/B978-0-12-801498-1.00013-9
  • Díaz-Pendón, J. A., Fernández-Muñoz, R., Gómez-Guillamón, M. L., & Moriones, E. (2005). Inheritance of resistance to watermelon mosaic virus in Cucumis melo that impairs virus accumulation, symptom expression, and aphid transmission. Phytopathology, 95(7), 840–846. https://doi.org/10.1094/PHYTO-95-0840
  • FAO (2022). FAOSTAT Statistical Database. https://www.fao.org/faostat/en/#data/QCL
  • Fauquet, C. M., Mayo, M. A., Maniloff, J., Desselberger, U., & Ball, L. A. (2005). International committee on taxonomy of viruses and the 3,142 unassigned species. Virology Journals, 16(2). https://doi.org/10.1186/1743-422X-2-64
  • Ferriol, M., & Picó, B. (2008). Pumpkin and winter squash. In J. Prohens & F. Nuez (Eds.), Vegetables I (pp. 317–349). Springer. https://doi.org/10.1007/978-0-387-30443-4_10
  • Fidan, H., Yildiz, K., Sarikaya, P., & Calis, O. (2023). First report of Tomato leaf curl New Delhi virus in Türkiye. New Disease Reports, 47, e12180. https://doi.org/10.1002/ndr2.12180
  • Güller, A., Usta, M., Korkmaz, G., & Demirel, S. (2024). First report of natural infection of watermelon mosaic virus (WMV) infecting bottle gourd and snake melon. Journal of Tekirdag Agricultural Faculty, 21(1), 206-218. https://doi.org/10.33462/jotaf.1260007
  • Hussain, M., Mansoor, S., Iram, S., Zafar, Y., & Briddon, R.W. (2004). First report of Tomato leaf curl New Delhi virus affecting chilli pepper in Pakistan. Plant Pathology, 9(20). https://doi.org/10.1111/j.1365-3059.2004.01073.x
  • Juárez, M., Tovar, R., Fiallo-Olivé, E., Aranda, M. A., Gosálvez, B., Castillo, P., Moriones, E., & Navas-Castill, J. (2014). First detection of tomato leaf curl New Delhi virus infecting zucchini in Spain. Plant Disease, 98(6), 857. https://doi.org/10.1094/PDIS-10-13-1050-PDN
  • Keyata, T., Sinhabandhu, S., & Reanwarakorn, K. (2024). Symptoms and disease virulence assessment in commercial pepper cultivars caused by pepper chat fruit viroid. Journal of Plant Diseases and Protection, 131, 1935–1944. https://doi.org/10.1007/s41348-024-00943-9
  • Kil, E., Vo, T. T., Fadhila, C., Ho, P. T., Lal, A., Troiano, E., Parrella, G., & Lee, S. (2020). Seed transmission of tomato leaf curl New Delhi virus from zucchini squash in Italy. Plants, 9(5), 563. https://doi.org/10.3390/plants9050563
  • Kumar, R.V. (2019). Plant antiviral immunity against geminiviruses and viral counter-defense for survival. Frontiers in Microbiology, 10, 1460. https://doi.org/10.3389/fmicb.2019.01460
  • Kumar, S., Stecher, G., & Tamura, K. (2016). MEGA7: Molecular evolu‐tionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870–1874.
  • Lecoq, H. (2003). Cucurbits. In G. Loebenstein & G. Thottapilly (Eds.), Virus and virus-like diseases of major crops in developing countries (pp. 665–688). Dordrecht, The Netherlands: Kluwer Academic Publishers. https://doi.org/10.1007/978-94-007-0791-7_26
  • Lecoq, H., & Desbiez, C. (2012). Viruses of cucurbit crops in the mediterranean region: an ever-changing picture. Advances in Virus Research, 84, 67–126. https://doi.org/10.1016/B978-0-12-394314-9.00003-8
  • Lecoq, H., & Katis, N. (2014). Control of cucurbit viruses. Advances in Virus Research, 90, 255–296. https://doi.org/10.1016/B978-0-12-801246-8.00005-6
  • Lecoq, H., Dafalla, G., & Desbiez, C. (2001). Biological and molecular characterization of Morrocan watermelon mosaic virus and a potyvirus isolate from eastern Sudan. Plant Disease, 85, 547–552. https://doi.org/10.1094/PDIS.2001.85.5.547
  • Lemmetty, A., Werkman, A.W., & Soukainen, M. (2011). First report of hop stunt viroid in greenhouse cucumber in Finland. Plant Disease, 95(5), 615. https://doi.org/ 10.1094/PDIS-12-10-0923
  • Li, R., Mock, R., Huang, Q., Abad, J., Hartung, J., & Kinard, G. (2008). A reliable and inexpensive method of nucleic acid extraction for the PCR-based detection of diverse plant pathogens. Journal of Virological Methods, 154, 48-55. https://doi.org/10.1016/j.jviromet.2008.09.008
  • Lopez, C., Ferriol, M., & Pico, M. (2015). Mechanical transmission of tomato leaf curl New Delhi virus to cucurbit germplasm: selection of tolerance sources in Cucumis melo. Euphytica, 204, 679–91. https://doi.org/10.1007/s10681-015-1371-x
  • Malathi, V. G., Renukadevi, P., Chakraborty, S., Biswas, K. K., Roy, A., Sivalingam, P. N., Venkataravanappa, V., & Mandal, B. (2017). Begomoviruses and their satellites occurring in india: distribution, diversity and pathogenesis. In B. Mandal, G. Rao, V. Baranwal & R. Jain (Eds.), A Century of Plant Virology (pp. 75–177). Springer. https://doi.org/10.1007/978-981-10-5672-7_5
  • Matsushita, Y., Yanagisawa, H., & Sano, T. (2018). Vertical and horizontal transmission of pospiviroids. Viruses, 10(12), 706. https://doi.org/10.3390/v10120706
  • McLeish, M., Sacristan, S., Fraile, A. & Garcia-Arenal, F. (2017). Scale dependencies and generalism in host use shape virus prevalence. Proceedings of the Royal Society Biological Sciences, 284. https://doi.org/10.1098/rspb.2017.2066
  • Mishra, R., Verma, R. K., Sharma, P., Choudhary, D. K., & Gaur, R. K. (2013). Interaction between viral proteins with the transmission of Potyvirus. Archives of Phytopathology and Plant Protection, 47(2), 240–253. https://doi.org/10.1080/03235408.2013.807659
  • Moreno, I. M., Malpica, J. M., Diaz-Pendon, J. A., Moriones, E., Fraile, A., & Garcia-Arenal, F. (2004). Variability and genetic structure of the population of watermelon mosaic virus infecting melon in Spain. Virology, 318, 451–460. https://doi.org/10.1016/j.virol.2003.10.002
  • Moriones, E., Praveen, S., & Chakraborty, S. (2017). Tomato leaf curl New Delhi virus: an emerging virus complex threatening vegetable and fiber crops. Viruses, 9(10), 264. https://doi.org/ 10.3390/v9100264
  • Moury, B., & Desbiez, C. (2020). Host range evolution of potyviruses: a global phylogenetic analysis. Viruses, 12(1), 111. https://doi.org/10.3390/v12010111
  • Muhire, B. M., Varsani, A., & Martin, D. P. (2014). SDT: A virus classification tool based on pairwise sequence alignment and identity calculation. PLoS ONE, 9, e108277. https://doi.org/10.1371/journal.pone.0108277
  • Nematollahi, S., Panahborhani, N., Koolivand, D. (2021). Molecular characterization and population evolution analysis of watermelon mosaic virus isolates on cucurbits of Northwest Iran. 3 Biotech, 11(2). https://doi.org/10.1007/s13205-020-02609-3
  • Panno, S., Iacono, G., Davino, M., Marchione, S., Zappardo, Z., Bella, P., Tomassoli, L., Accotto, G. P., & Davino, S. (2016). First report of tomato leaf curl New Delhi virus affecting zucchini squash in an important horticultural area of southern Italy. New Disease Reports, 33(6). https://doi.org/10.5197/j.2044-0588.2016.033.006
  • Pérez-de-Castro, A., Martínez de Alba, A.E., Sáez, C., Flores, A., Sifres, A., Gómez-Guillamón, M.L., López, C., & Picó, B. (2020). Incidence and genetic diversity of cucurbit viruses in Spain. Acta Horticulturae, 1294, 203–210. https://doi.org/10.17660/ActaHortic.2020.1294.25
  • Reanwarakorn, K., Klinkong, S., & Porsoongnurn, J. (2011). First report of natural infection of pepper chat fruit viroid in tomato plants in Thailand. New Disease Reports, 24(6). http://dx.doi.org/10.5197/j.2044-0588.2011.024.006
  • Sano, T. (2003). Hop stunt viroid. In A.Hadidi, R. Flores, J. W. Randles & J. S. Semancik (Eds.), Viroids (pp. 207-212). Collingwood, Australia: CSIRO Publishing.
  • Sastry, K. S., Mandal, B., Hammond, J., Scott, S. W., & Briddon, R. W. (2019). Encyclopedia of plant viruses and viroids. Springer, New Delhi. https://doi.org/10.1007/978-81-322-3912-3
  • Sharma, P. (2023). Epidemiology of potyviruses infecting crops of cucurbitaceae. In R. K. Gaur, B. L. Patil & R. Selvarajan (Eds.), Plant RNA Viruses (213-227). Academic Press. https://doi.org/10.1016/B978-0-323-95339-9.00016-8
  • Sharma, P., Sahu, A. K., Verma, R. K., Mishra, R., Choudhary, D. K., & Gaur, R. K. (2013). Current status of Potyvirus in India. Archives of Phytopathology and Plant Protection, 47(8), 906–918. https://doi.org/10.1080/03235408.2013.825963
  • Siskos, L., Cui, L., Wang, C., Visser, R. G. F., Bai, Y. L., & Schouten, H. J. (2022). A new challenge in melon resistance breeding: the ToLCNDV case. Euphytica, 218(9). https://doi: 10.1007/s10681-022-03081-1
  • Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994). CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight. Nucleic Acids Research, 22(22), 4673-4680. https://doi: 10.1093/nar/22.22.4673
  • Thompson, W. M. O. (2011). Introduction: whiteflies, geminiviruses and recent events. In W. Thompson (Ed.), The whitefly, Bemisia tabaci (Homoptera: Aleyrodidae) interaction with Geminivirus-infected host plants. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-1524-0_1
  • Troiano, E., & Parrella, G. (2023). First report of tomato leaf curl New Delhi virus in Lagenaria siceraria var. longissima in Italy. Phytopathologia Mediterranea, 62(1), 25-28. https://doi: 10.36253/phyto-14147
  • Venkataravanappa, V., Ashwathappa, K. V., Reddy, C. N. L., Shankarappa, K. S., & Reddy, M. K. (2020). Characterization of tomato leaf curl New Delhi virus associated with leaf curl and yellowing disease of watermelon and development of LAMP assay for its detection. 3 Biotech, 10, 282. https://doi.org/10.1007/s13205-020-02245-x
  • Verhoeven, J. T. J., Jansen, C. C. C. , Roenhorst, J. W., Flores, R., & De La Peña, M. (2009). Pepper chat fruit viroid: biological and molecular properties of a proposed new species of the genus pospiviroid. Virus Research, 144, 209–214. https://doi.org/10.1016/j.virusres.2009.05.002
  • Verhoeven, J. T. J., Jansen, C. C. C., Willemen, T. M., Kox, L. F. F., Owens, R. A., & Roenhorst, J. W. (2004). Natural infections of tomato by citrus exocortis viroid, columnea latent viroid, potato spindle tuber viroid and tomato chlorotic dwarf viroid. European Journal of Plant Pathology, 110(8), 823-31. https://doi.org/10.1007/s10658-004-2493-5
  • Walker, P. J., Siddell, S. G., Lefkowitz, E. J., Mushegian, A. R., Adriaenssens, E. M., Alfenas-Zerbini P., Davison, A. J., Dempsey, D. M., Dutilh, B. E., García, M. L., Harrach, B., Harrison, R. L., Hendrickson, R. C., Junglen, S., Knowles, N. J., Krupovic, M., Kuhn, J. H., Lambert, A. J., Łobocka, M., Nibert, M. L., Oksanen, H. M., Orton, R. J., Robertson, D. L., Rubino, L., Sabanadzovic, S., Simmonds, P., Smith, D. B., Suzuki, N., Van Dooerslaer, K., Vandamme, A. M., Varsani, A., & Zerbini, F. M. (2021). Changes to virus taxonomy and to the international code of virus classification and nomenclature ratified by the international committee on taxonomy of viruses (2021). Archieves of Virology, 166(9), 2633–2648. https://doi.org/10.1007/s00705-021-05156-1
  • Yanagisawa, H., & Matsushita, Y. (2017). Host ranges and seed transmission of tomato planta macho viroid and pepper chat fruit viroid. European Journal of Plant Pathology, 149 (1), 211–217. https://doi.org/10.1007/s10658-017-1160-6
  • Yazdani-Khameneh, S., Aboutorabi, S., Shoori, M., Aghazadeh, A., Jahanshahi, P., Golnaraghi, A., & Maleki, M. (2016). Natural Occurrence of tomato leaf curl new delhi virus in iranian cucurbit crops. The Plant Pathology Journal, 32(3), 201. https://doi: 10.5423/PPJ.OA.10.2015.0210
  • Yeşil, S. (2019). Some virus diseases of edible seed squash (Cucurbita pepo L.) in Aksaray Province, Turkey. Yuzuncu Yıl University Journal of Agricultural Sciences, 29, 63-71. https://doi.org/10.29133/yyutbd.476052
  • Zerbini, F. M., Briddon, R. W., Idris, A., Martin, D. P., Moriones, E., Navas-Castillo, J., Rivera-Bustamante, R., Roumagnac, P., & Varsani, A. (2017). Consortium, I.R. ICTV virus taxonomy profile: Geminiviridae. Journal of General Virology, 98(2), 131–133. https://doi.org/10.1099/jgv.0.000738
  • Zhao, X., Tan, Z., Feng, H., Yang, R., Li, M., Jiang, J., Shen,G., & Yu, R. (2011). Microsatellites in different Potyvirus genomes: survey and analysis. Gene, 488, 52-56. https://doi.org/10.1016/j.gene.2011.08.016
  • Zheng, L., Rodonibc, B. C., Gibbs, M. J., & Gibbs, A. J. (2010). A novel pair of universal primers for the detection of potyviruses. Plant Pathology, 59(2), 211-220. https://doi.org/10.1111/j.1365-3059.2009.02201.x
There are 59 citations in total.

Details

Primary Language English
Subjects Phytopathology
Journal Section Articles
Authors

Selin Ceren Balsak 0000-0002-2326-7520

Early Pub Date June 20, 2025
Publication Date June 30, 2025
Submission Date February 25, 2025
Acceptance Date May 29, 2025
Published in Issue Year 2025 Volume: 35 Issue: 2

Cite

APA Balsak, S. C. (2025). Investigation of Virus and Viroid Diseases in Cucurbits. Yuzuncu Yıl University Journal of Agricultural Sciences, 35(2), 369-380. https://doi.org/10.29133/yyutbd.1646487
Creative Commons License
Yuzuncu Yil University Journal of Agricultural Sciences by Van Yuzuncu Yil University Faculty of Agriculture is licensed under a Creative Commons Attribution 4.0 International License.