Araştırma Makalesi
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Gastroenteritisli Köpeklerde Viral Etkenlerin PCR İle Araştırılması

Yıl 2025, Cilt: 4 Sayı: 2, 18 - 24, 31.12.2025

Öz

Gastroenteritis, köpeklerde sık karşılaşılan, morbidite ve mortaliteye yol açabilen önemli bir klinik tablodur. Hastalık; viral, bakteriyel, paraziter veya toksik birçok etkene bağlı olarak gelişebilmekte olup, özellikle genç hayvanlarda hızlı seyirli olabilmekte ve hatta ölümcül seyredebilmektedir. Bu çalışmada, gastroenteritisli köpeklerde viral etkenlerin varlığının araştırılması, enterik viral patojenlerin prevalansının belirlenmesi, koenfeksiyon durumlarının ortaya konulması ve tespit edilen virusların genetik karakterizasyonlarının yapılması amaçlanmıştır. Araştırma kapsamında, Ankara’daki veteriner kliniklerine gastroenteritis semptomlarıyla (akut diyare, kusma, iştahsızlık, ateş) getirilen sahipli 61 köpekten dışkı/rektal sürüntü örnekleri toplanmıştır. Örnekler; canine parvovirus (CPV), canine circovirus (CaCV), canine rotavirus (CRV), canine coronavirus (CCoV), Caliciviridae ailesine ait viruslar (norovirus, sapovirus, vesivirus), canine astrovirus (CaAstV) ve canine distemper virus (CDV) açısından konvansiyonel PCR yöntemine tabi tutulmuşlardır. Toplam 61 örneğin 17’si CPV (%27,9), 3’ü CaCV (%4,9), 2’si CRV (%3,3), 35’i CCoV (%57,4), 1’i Caliciviridae (%1,6), 5’i CaAstV (%8,2) ve 7’si CDV (%11,5) yönünden pozitif bulunmuştur. Bazı köpeklerde iki veya daha fazla etkenin birlikte bulunduğu koenfeksiyonlar saptanmıştır. Pozitif örnekler, virusların genetik çeşitliliği ve olası filogenetik ilişkileri değerlendirmek amacıyla dizileme ve filogenetik analizlere tabi tutulma aşamasındadır. Nihai olarak çalışmanın çıktıları ile köpeklerde gastroenteritise sebep olan viral ajanların etkisi ve viral etiyolojideki rolü üzerine değerlendirmeler ile gastroenteritis etkeni olarak tespit edilen virusların muhtemel orijini ve genetik çeşitliliğinin ortaya konulabilmesi sağlanacaktır.

Etik Beyan

Bu çalışma, Ankara Üniversitesi Hayvan Deneyleri Yerel Etik Kurulu’nun 12.07.2023 tarih ve 2023-13-116 numaralı Etik kurul onayı ile yapılmıştır.

Destekleyen Kurum

Ankara Üniversitesi BAP Koordinatörlüğü

Proje Numarası

Ankara Üniversitesi BAP: TDK-2024-3342

Teşekkür

Bu çalışma Ankara Üniversitesi Veteriner Fakültesi Viroloji Ana Bilim Dalı’nda Solmaz Özkan tarafından yürütülmekte olan doktora tez çalışmasından üretilmiş olup, “7. Uluslararası Harran Bilimsel Araştırmalarda Yenilikçi Yaklaşımlar Kongresi”nde (19–21 Ekim 2025, Şanlıurfa) sözlü bildiri olarak sunulmuştur. Bu çalışmada kullanılan klinik örneklerin temininde destek sağlayan Ankara’daki özel veteriner kliniklerine ve tez çalışmasının yürütülmesindeki destekleri için Ankara Üniversitesi Veteriner Fakültesi Viroloji Ana Bilim Dalı Başkanlığına teşekkür ederiz.

Kaynakça

  • Alves, C. D., Granados, O. F., Budaszewski, R. D. F., Streck, A. F., Weber, M. N., Cibulski, S. P., & Canal, C. W. (2018). Identification of enteric viruses circulating in a dog population with low vaccine coverage. Brazilian Journal of Microbiology, 49(4), 790–794. https://doi.org/10.1016/j.bjm.2018.02.006
  • Avci, O., Bulut, O., Yapici, O., Hasircioglu, S., & Simsek, A. (2016). Canine coronavirus infection in dogs in Turkey: Virological and serological evidence. Indian Journal of Animal Research, 50(4). https://doi.org/10.18805/ijar.11173
  • Capozza, P., Buonavoglia, A., Pratelli, A., Martella, V., & Decaro, N. (2023). Old and novel enteric parvoviruses of dogs. Pathogens, 12(5), 722. https://doi.org/10.3390/pathogens12050722
  • Day, M. J., Horzinek, M. C., Schultz, R. D., & Squires, R. A. (2016). WSAVA Guidelines for the vaccination of dogs and cats. Journal of Small Animal Practice, 57(1), E1–E45. https://doi.org/10.1111/jsap.12431
  • Decaro, N., & Buonavoglia, C. (2011). Canine coronavirus: Not only an enteric pathogen. Veterinary Clinics of North America: Small Animal Practice, 41(6), 1121–1132. https://doi.org/10.1016/j.cvsm.2011.07.005
  • Decaro, N., & Buonavoglia, C. (2012). Canine parvovirus—A review of epidemiological and diagnostic aspects, with emphasis on type 2c. Veterinary Microbiology, 155(1–2), 1–12. https://doi.org/10.1016/j.vetmic.2011.09.007
  • Decaro, N., Elia, G., Campolo, M., Desario, C., Lucente, M. S., Bellacicco, A. L., & Buonavoglia, C. (2005). New approaches for the molecular characterization of canine parvovirus type 2 strains. Journal of Veterinary Medicine, Series B, 52(7–8), 316–319. https://doi.org/10.1111/j.1439-0450.2005.00869.x
  • Dinçer, E. (2017). Molecular characterization and phylogenetic analysis of canine parvovirus 2 in dogs, Mersin Province, Turkey. Etlik Veteriner Mikrobiyoloji Dergisi, 28(2), 96-100. https://doi.org/10.35864/evmd.523432
  • Greene, C. E., & Carmichael, L. E. (2015). Infectious diseases of the dog and cat (4th ed.). Elsevier.
  • Jiang, X., Huang, P. W., Zhong, W. M., Farkas, T., Cubitt, D. W., & Matson, D. O. (1999). Design and evaluation of a primer pair that detects both Norwalk-and Sapporo-like caliciviruses by RT-PCR. Journal of virological methods, 83(1-2), 145-154. https://doi.org/10.1016/S0166-0934(99)00114-7
  • Karapınar, Z., & Timurkan, M. O. (2024). Detection and molecular characterization of canine coronavirus based on partial membrane gene sequences. Van Veterinary Journal, 35(1), 27-31. https://doi.org/10.36483/vanvetj.1302205
  • Loor-Giler, A., Castillo-Reyes, S., Santander-Parra, S., Campos, M., Mena-Pérez, R., Prado-Chiriboga, S., & Nuñez, L. (2024). First report on the molecular detection of canine astrovirus (CaAstV) in dogs with gastrointestinal disease in Ecuador using a fast and sensitive RT-qPCR assay based on SYBR Green®. Veterinary Sciences, 11(7), 303. https://doi.org/10.3390/vetsci11070303
  • Martella, V., Elia, G., & Buonavoglia, C. (2008a). Canine distemper virus. Veterinary Clinics of North America: Small Animal Practice, 38(4), 787–797. https://doi.org/10.1016/j.cvsm.2008.02.007
  • Martella, V., Lorusso, E., Decaro, N., Elia, G., Radogna, A., D’Abramo, M., Desario, C., Campolo, M., Cavalli, A., Corrente, M., Greco, G., & Buonavoglia, C. (2008b). Detection and molecular characterization of a canine norovirus. Emerging Infectious Diseases, 14(8), 1306–1308. https://doi.org/10.3201/eid1408.080062
  • Martella, V., Moschidou, P., Lorusso, E., Mari, V., Camero, M., Bellacicco, A., Losurdo, M., Pinto, P., Desario, C., Bányai, K., Elia, G., Decaro, N., & Buonavoglia, C. (2011). Detection and characterization of canine astroviruses. Journal of General Virology, 92(8), 1880–1887. https://doi.org/10.1099/vir.0.029025-0
  • Ortega, A. F., Martínez-Castañeda, J. S., Bautista-Gómez, L. G., Muñoz, R. F., & Hernández, I. Q. (2017). Identification of co-infection by rotavirus and parvovirus in dogs with gastroenteritis in Mexico. Brazilian journal of microbiology, 48, 769-773.https://doi.org/10.1016/j.bjm.2017.03.008
  • Park, S. J., Jeong, C., Yoon, S. S., Choy, H. E., Saif, L. J., Kim, H., & Park, S. Y. (2012). Prevalence of canine rotavirus and coronavirus infections in dogs with diarrhea in Korea. Journal of Veterinary Clinics, 29(1), 1–5.
  • Parrish, C. R., Aquadro, C. F., Strassheim, M. L., Evermann, J. F., Sgro, J. Y., & Mohammed, H. (1991). Rapid antigenic-type replacement and DNA sequence evolution of canine parvovirus. Journal of Virology, 65(12), 6544–6552.
  • Pratelli, A. (2006). Genetic evolution of canine coronavirus and recent advances in prophylaxis. Veterinary Research, 37(2), 191–200.https://doi.org/10.1051/vetres:2005053
  • Pratelli, A., Tempesta, M., Greco, G., Martella, V., & Buonavoglia, C. (1999). Development of a nested PCR assay for the detection of canine coronavirus. Journal of Virological Methods, 80(1), 11–15. https://doi.org/10.1016/S0166-0934(99)00017-8
  • Saltık, H. S., & Koç, B. T. (2024). First identification of canine parvovirus‐2a/2b variant in unvaccinated domestic dogs with gastrointestinal signs in Türkiye. Veterinary Medicine and Science, 10(4), e1523. https://doi.org/10.1002/vms3.1523
  • Silva, D. F., Ciola, M., Lopes, V. de O., Medeiros Matias, D. R., & Oliveira, T. S. (2025). Canine circovirus: emergence, adaptation, and challenges. Frontiers in Veterinary Science. https://doi.org/10.3389/fvets.2025.1535650
  • Sykes, J. E. (2013). Canine parvovirus infections and other viral enteritides. In J. E. Sykes (Ed.), Canine and feline infectious diseases (pp. 141–151). Elsevier. https://doi.org/10.1016/B978-1-4377-0795-3.00014-4
  • Takano, T., Takashina, M., Doki, T., & Hohdatsu, T. (2015). Detection of canine astrovirus in dogs with diarrhea in Japan. Archives of Virology, 160(6), 1549–1553. https://doi.org/10.1007/s00705-015-2405-3
  • Temizkan, M. C., & Sevinc Temizkan, S. (2023). Canine parvovirus in Turkey: first whole-genome sequences, strain distribution, and prevalence. Viruses, 15(4), 957. https://doi.org/10.3390/v15040957
  • Timurkan, M. Ö., & Oğuzoğlu, T. Ç. (2015). Molecular characterization of canine parvovirus (CPV) infection in dogs in Turkey. Veterinaria Italiana, 51(1), 39–44. https://doi.org/10.12834/Vetlt.263.908.3
  • Turan, T. U. R. H. A. N., & Işıdan, H. (2020). Molecular characterization of canine astrovirus, vesivirus and circovirus, isolated from diarrheic dogs in Turkey. Iranian Journal of Veterinary Research, 21(3), 172. https://doi.org/ 10.22099/ijvr.2020.35522.5212
  • Yeşilbağ, K., Yilmaz, Z. E. K. İ., Torun, S., & Pratelli, A. (2004). Canine coronavirus infection in Turkish dog population. Journal of Veterinary Medicine, Series B, 51(7), 353–355. https://doi.org/10.1111/j.1439-0450.2004.00773.x
  • Zaccaria, G., Malatesta, D., Scaglione, F. E., Peletto, S., & Biolatti, C. (2016). Circoviruses in domestic and wild carnivores: An important opportunistic agent? Virology, 489, 1–7. https://doi.org/10.1016/j.virol.2016.01.007
  • Zobba, R., Visco, S., Sotgiu, F., Pinna Parpaglia, M. L., Pittau, M., & Alberti, A. (2021). Molecular survey of parvovirus, astrovirus, coronavirus, and calicivirus in symptomatic dogs. Veterinary Research Communications, 45(1), 31–40. https://doi.org/10.1007/s11259-020-09785-w

Investigation of Viral Agents in Dogs with Gastroenteritis by PCR

Yıl 2025, Cilt: 4 Sayı: 2, 18 - 24, 31.12.2025

Öz

Gastroenteritis is a frequently encountered clinical syndrome in dogs and represents a significant cause of morbidity and mortality. The disease can arise from multiple etiological factors including viral, bacterial, parasitic, and toxic agents. Particularly in young animals, the clinical course may progress rapidly, leading to severe outcomes or even death. The aim of the present study was to investigate the presence of viral pathogens in dogs presenting with gastroenteritis, to determine the prevalence of major enteric viral agents, to identify coinfection patterns, and to conduct genetic characterization of the detected viruses.A total of 61 fecal and rectal swab samples were collected from owned dogs presented to veterinary clinics in Ankara with clinical symptoms such as acute diarrhea, vomiting, anorexia, and fever. Samples were screened using conventional PCR for canine parvovirus (CPV), canine circovirus (CaCV), canine rotavirus (CRV), canine coronavirus (CCoV), Caliciviridae family members (norovirus, sapovirus, vesivirus), canine astrovirus (CaAstV), and canine distemper virus (CDV). Of the 61 samples analyzed, 17 were positive for CPV (27.9%), 3 for CaCV (4.9%), 2 for CRV (3.3%), 35 for CCoV (57.4%), 1 for Caliciviridae (1.6%), 5 for CaAstV (8.2%), and 7 for CDV (11.5%). Moreover, coinfections involving two or more viral agents were detected in several dogs. Currently, positive samples are being subjected to sequencing and phylogenetic analyses to evaluate their genetic diversity and potential evolutionary relationships. Ultimately, the results of this study will allow for an assessment of the effects of viral agents causing gastroenteritis in dogs and their role in viral etiology, as well as elucidate the possible origins and genetic diversity of the viruses identified as causative agents.

Proje Numarası

Ankara Üniversitesi BAP: TDK-2024-3342

Kaynakça

  • Alves, C. D., Granados, O. F., Budaszewski, R. D. F., Streck, A. F., Weber, M. N., Cibulski, S. P., & Canal, C. W. (2018). Identification of enteric viruses circulating in a dog population with low vaccine coverage. Brazilian Journal of Microbiology, 49(4), 790–794. https://doi.org/10.1016/j.bjm.2018.02.006
  • Avci, O., Bulut, O., Yapici, O., Hasircioglu, S., & Simsek, A. (2016). Canine coronavirus infection in dogs in Turkey: Virological and serological evidence. Indian Journal of Animal Research, 50(4). https://doi.org/10.18805/ijar.11173
  • Capozza, P., Buonavoglia, A., Pratelli, A., Martella, V., & Decaro, N. (2023). Old and novel enteric parvoviruses of dogs. Pathogens, 12(5), 722. https://doi.org/10.3390/pathogens12050722
  • Day, M. J., Horzinek, M. C., Schultz, R. D., & Squires, R. A. (2016). WSAVA Guidelines for the vaccination of dogs and cats. Journal of Small Animal Practice, 57(1), E1–E45. https://doi.org/10.1111/jsap.12431
  • Decaro, N., & Buonavoglia, C. (2011). Canine coronavirus: Not only an enteric pathogen. Veterinary Clinics of North America: Small Animal Practice, 41(6), 1121–1132. https://doi.org/10.1016/j.cvsm.2011.07.005
  • Decaro, N., & Buonavoglia, C. (2012). Canine parvovirus—A review of epidemiological and diagnostic aspects, with emphasis on type 2c. Veterinary Microbiology, 155(1–2), 1–12. https://doi.org/10.1016/j.vetmic.2011.09.007
  • Decaro, N., Elia, G., Campolo, M., Desario, C., Lucente, M. S., Bellacicco, A. L., & Buonavoglia, C. (2005). New approaches for the molecular characterization of canine parvovirus type 2 strains. Journal of Veterinary Medicine, Series B, 52(7–8), 316–319. https://doi.org/10.1111/j.1439-0450.2005.00869.x
  • Dinçer, E. (2017). Molecular characterization and phylogenetic analysis of canine parvovirus 2 in dogs, Mersin Province, Turkey. Etlik Veteriner Mikrobiyoloji Dergisi, 28(2), 96-100. https://doi.org/10.35864/evmd.523432
  • Greene, C. E., & Carmichael, L. E. (2015). Infectious diseases of the dog and cat (4th ed.). Elsevier.
  • Jiang, X., Huang, P. W., Zhong, W. M., Farkas, T., Cubitt, D. W., & Matson, D. O. (1999). Design and evaluation of a primer pair that detects both Norwalk-and Sapporo-like caliciviruses by RT-PCR. Journal of virological methods, 83(1-2), 145-154. https://doi.org/10.1016/S0166-0934(99)00114-7
  • Karapınar, Z., & Timurkan, M. O. (2024). Detection and molecular characterization of canine coronavirus based on partial membrane gene sequences. Van Veterinary Journal, 35(1), 27-31. https://doi.org/10.36483/vanvetj.1302205
  • Loor-Giler, A., Castillo-Reyes, S., Santander-Parra, S., Campos, M., Mena-Pérez, R., Prado-Chiriboga, S., & Nuñez, L. (2024). First report on the molecular detection of canine astrovirus (CaAstV) in dogs with gastrointestinal disease in Ecuador using a fast and sensitive RT-qPCR assay based on SYBR Green®. Veterinary Sciences, 11(7), 303. https://doi.org/10.3390/vetsci11070303
  • Martella, V., Elia, G., & Buonavoglia, C. (2008a). Canine distemper virus. Veterinary Clinics of North America: Small Animal Practice, 38(4), 787–797. https://doi.org/10.1016/j.cvsm.2008.02.007
  • Martella, V., Lorusso, E., Decaro, N., Elia, G., Radogna, A., D’Abramo, M., Desario, C., Campolo, M., Cavalli, A., Corrente, M., Greco, G., & Buonavoglia, C. (2008b). Detection and molecular characterization of a canine norovirus. Emerging Infectious Diseases, 14(8), 1306–1308. https://doi.org/10.3201/eid1408.080062
  • Martella, V., Moschidou, P., Lorusso, E., Mari, V., Camero, M., Bellacicco, A., Losurdo, M., Pinto, P., Desario, C., Bányai, K., Elia, G., Decaro, N., & Buonavoglia, C. (2011). Detection and characterization of canine astroviruses. Journal of General Virology, 92(8), 1880–1887. https://doi.org/10.1099/vir.0.029025-0
  • Ortega, A. F., Martínez-Castañeda, J. S., Bautista-Gómez, L. G., Muñoz, R. F., & Hernández, I. Q. (2017). Identification of co-infection by rotavirus and parvovirus in dogs with gastroenteritis in Mexico. Brazilian journal of microbiology, 48, 769-773.https://doi.org/10.1016/j.bjm.2017.03.008
  • Park, S. J., Jeong, C., Yoon, S. S., Choy, H. E., Saif, L. J., Kim, H., & Park, S. Y. (2012). Prevalence of canine rotavirus and coronavirus infections in dogs with diarrhea in Korea. Journal of Veterinary Clinics, 29(1), 1–5.
  • Parrish, C. R., Aquadro, C. F., Strassheim, M. L., Evermann, J. F., Sgro, J. Y., & Mohammed, H. (1991). Rapid antigenic-type replacement and DNA sequence evolution of canine parvovirus. Journal of Virology, 65(12), 6544–6552.
  • Pratelli, A. (2006). Genetic evolution of canine coronavirus and recent advances in prophylaxis. Veterinary Research, 37(2), 191–200.https://doi.org/10.1051/vetres:2005053
  • Pratelli, A., Tempesta, M., Greco, G., Martella, V., & Buonavoglia, C. (1999). Development of a nested PCR assay for the detection of canine coronavirus. Journal of Virological Methods, 80(1), 11–15. https://doi.org/10.1016/S0166-0934(99)00017-8
  • Saltık, H. S., & Koç, B. T. (2024). First identification of canine parvovirus‐2a/2b variant in unvaccinated domestic dogs with gastrointestinal signs in Türkiye. Veterinary Medicine and Science, 10(4), e1523. https://doi.org/10.1002/vms3.1523
  • Silva, D. F., Ciola, M., Lopes, V. de O., Medeiros Matias, D. R., & Oliveira, T. S. (2025). Canine circovirus: emergence, adaptation, and challenges. Frontiers in Veterinary Science. https://doi.org/10.3389/fvets.2025.1535650
  • Sykes, J. E. (2013). Canine parvovirus infections and other viral enteritides. In J. E. Sykes (Ed.), Canine and feline infectious diseases (pp. 141–151). Elsevier. https://doi.org/10.1016/B978-1-4377-0795-3.00014-4
  • Takano, T., Takashina, M., Doki, T., & Hohdatsu, T. (2015). Detection of canine astrovirus in dogs with diarrhea in Japan. Archives of Virology, 160(6), 1549–1553. https://doi.org/10.1007/s00705-015-2405-3
  • Temizkan, M. C., & Sevinc Temizkan, S. (2023). Canine parvovirus in Turkey: first whole-genome sequences, strain distribution, and prevalence. Viruses, 15(4), 957. https://doi.org/10.3390/v15040957
  • Timurkan, M. Ö., & Oğuzoğlu, T. Ç. (2015). Molecular characterization of canine parvovirus (CPV) infection in dogs in Turkey. Veterinaria Italiana, 51(1), 39–44. https://doi.org/10.12834/Vetlt.263.908.3
  • Turan, T. U. R. H. A. N., & Işıdan, H. (2020). Molecular characterization of canine astrovirus, vesivirus and circovirus, isolated from diarrheic dogs in Turkey. Iranian Journal of Veterinary Research, 21(3), 172. https://doi.org/ 10.22099/ijvr.2020.35522.5212
  • Yeşilbağ, K., Yilmaz, Z. E. K. İ., Torun, S., & Pratelli, A. (2004). Canine coronavirus infection in Turkish dog population. Journal of Veterinary Medicine, Series B, 51(7), 353–355. https://doi.org/10.1111/j.1439-0450.2004.00773.x
  • Zaccaria, G., Malatesta, D., Scaglione, F. E., Peletto, S., & Biolatti, C. (2016). Circoviruses in domestic and wild carnivores: An important opportunistic agent? Virology, 489, 1–7. https://doi.org/10.1016/j.virol.2016.01.007
  • Zobba, R., Visco, S., Sotgiu, F., Pinna Parpaglia, M. L., Pittau, M., & Alberti, A. (2021). Molecular survey of parvovirus, astrovirus, coronavirus, and calicivirus in symptomatic dogs. Veterinary Research Communications, 45(1), 31–40. https://doi.org/10.1007/s11259-020-09785-w
Toplam 30 adet kaynakça vardır.

Ayrıntılar

Birincil Dil Türkçe
Konular Veteriner Viroloji
Bölüm Araştırma Makalesi
Yazarlar

Solmaz Özkan 0000-0002-8224-525X

Taner Karaoğlu 0000-0002-9968-0813

Proje Numarası Ankara Üniversitesi BAP: TDK-2024-3342
Gönderilme Tarihi 30 Kasım 2025
Kabul Tarihi 24 Aralık 2025
Yayımlanma Tarihi 31 Aralık 2025
Yayımlandığı Sayı Yıl 2025 Cilt: 4 Sayı: 2

Kaynak Göster

APA Özkan, S., & Karaoğlu, T. (2025). Gastroenteritisli Köpeklerde Viral Etkenlerin PCR İle Araştırılması. Antakya Veteriner Bilimleri Dergisi, 4(2), 18-24.