Araştırma Makalesi

Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images

Cilt: 11 Sayı: 2 4 Haziran 2023
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Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images

Öz

In this translational study, the classification of precancerous colorectal lesions is performed by the ConvNeXt method on MHIST histopathological imaging dataset. The ConvNeXt method is the modernized ResNet-50 architecture having some training tricks inspired by Swin Transformers and ResNeXT. The performance of the ConvNeXt models are benchmarked on different scenarios such as ‘full data’, ‘gradually increasing difficulty based data’ and ‘k-shot data’. The ConvNeXt models outperformed almost all the other studies which are applied on MHIST by using ResNet models, vision transformers, weight distillation, self-supervised learning and curriculum learning strategy in terms of different scenarios and metrics. The ConvNeXt model trained with ‘full data’ yields the best result with the score of 0.8890 for accuracy, 0.9391 for AUC, 0.9121 for F1 and 0.7633 for cohen’s cappa.

Anahtar Kelimeler

Destekleyen Kurum

Dicle Üniversitesi

Proje Numarası

DÜBAP Project No: MÜHENDİSLİK.22.001

Teşekkür

Dicle Üniversitesi Bilimsel Araştırma Projeleri Koordinatörlüğü'ne desteklerinden dolayı teşekkür ederiz.

Kaynakça

  1. [1] S. Famitha and M. Moorthi, “Intelligent and novel multi-type cancer prediction model using optimized ensemble learning,” Comput. Methods Biomech. Biomed. Engin., 2022, doi: 10.1080/10255842.2022.2081504.
  2. [2] D. M. Metter, T. J. Colgan, S. T. Leung, C. F. Timmons, and J. Y. Park, “Trends in the us and canadian pathologistworkforces from 2007 to 2017,” JAMA Netw. Open, vol. 2, no. 5, pp. 1–11, 2019, doi: 10.1001/jamanetworkopen.2019.4337.
  3. [3] I. Mármol, C. Sánchez-de-Diego, A. P. Dieste, E. Cerrada, and M. J. R. Yoldi, “Colorectal carcinoma: A general overview and future perspectives in colorectal cancer,” Int. J. Mol. Sci., vol. 18, no. 1, 2017, doi: 10.3390/ijms18010197.
  4. [4] J. Wei et al., “A Petri Dish for Histopathology Image Analysis,” Jan. 2021, [Online]. Available: http://arxiv.org/abs/2101.12355
  5. [5] J. Wei et al., “Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification,” Sep. 2020, [Online]. Available: http://arxiv.org/abs/2009.13698
  6. [6] Y. Wang, Q. Yao, J. T. Kwok, and L. M. Ni, “Generalizing from a Few Examples,” ACM Comput. Surv., vol. 53, no. 3, pp. 1–34, 2021, doi: 10.1145/3386252.
  7. [7] V. Dumoulin et al., “Comparing Transfer and Meta Learning Approaches on a Unified Few-Shot Classification Benchmark,” Apr. 2021, [Online]. Available: http://arxiv.org/abs/2104.02638
  8. [8] X. X. Yin, S. Hadjiloucas, Y. Zhang, and Z. Tian, “MRI radiogenomics for intelligent diagnosis of breast tumors and accurate prediction of neoadjuvant chemotherapy responses-a review,” Comput. Methods Programs Biomed., vol. 214, p. 106510, 2022, doi: 10.1016/j.cmpb.2021.106510.

Ayrıntılar

Birincil Dil

İngilizce

Konular

Yapay Zeka

Bölüm

Araştırma Makalesi

Erken Görünüm Tarihi

26 Mayıs 2023

Yayımlanma Tarihi

4 Haziran 2023

Gönderilme Tarihi

21 Ocak 2023

Kabul Tarihi

23 Şubat 2023

Yayımlandığı Sayı

Yıl 2023 Cilt: 11 Sayı: 2

Kaynak Göster

APA
Nergiz, M. (2023). Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images. Balkan Journal of Electrical and Computer Engineering, 11(2), 129-137. https://doi.org/10.17694/bajece.1240284
AMA
1.Nergiz M. Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images. Balkan Journal of Electrical and Computer Engineering. 2023;11(2):129-137. doi:10.17694/bajece.1240284
Chicago
Nergiz, Mehmet. 2023. “Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images”. Balkan Journal of Electrical and Computer Engineering 11 (2): 129-37. https://doi.org/10.17694/bajece.1240284.
EndNote
Nergiz M (01 Haziran 2023) Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images. Balkan Journal of Electrical and Computer Engineering 11 2 129–137.
IEEE
[1]M. Nergiz, “Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images”, Balkan Journal of Electrical and Computer Engineering, c. 11, sy 2, ss. 129–137, Haz. 2023, doi: 10.17694/bajece.1240284.
ISNAD
Nergiz, Mehmet. “Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images”. Balkan Journal of Electrical and Computer Engineering 11/2 (01 Haziran 2023): 129-137. https://doi.org/10.17694/bajece.1240284.
JAMA
1.Nergiz M. Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images. Balkan Journal of Electrical and Computer Engineering. 2023;11:129–137.
MLA
Nergiz, Mehmet. “Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images”. Balkan Journal of Electrical and Computer Engineering, c. 11, sy 2, Haziran 2023, ss. 129-37, doi:10.17694/bajece.1240284.
Vancouver
1.Mehmet Nergiz. Classification of Precancerous Colorectal Lesions via ConvNeXt on Histopathological Images. Balkan Journal of Electrical and Computer Engineering. 01 Haziran 2023;11(2):129-37. doi:10.17694/bajece.1240284

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