Araştırma Makalesi

Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus

Cilt: 7 Sayı: 2 15 Mart 2024
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Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus

Öz

Fossil fuels are a crucial resource for the global economy, but they also contribute to greenhouse gas emissions and environmental pollution. Lignocellulosic biomass, which includes cellulose, hemicellulose, and lignin obtained from plants, is a promising alternative to fossil fuels. It can help address these problems while reducing environmental impact. Enzymatic pre-treatment is used to degrade lignocellulosic biomass into subunits. The degradation of the hemicellulose structure involves accessory enzymes of industrial importance, such as α-glucuronidase. α-glucuronidases (EC 3.2.1.139) catalyze the hydrolysis of the α-1,2-glycosidic bond between α-D-glucuronic acid (GlcA) or its 4-o-methyl ether form (MeGlcA) and d-xylose units in the structure of xylooligosaccharides. The aim of this study was cloning, heterologous expression and biochemical characterization of the α-glucuronidase enzyme from the thermophilic bacterium Geobacillus kaustophilus. With this aim, the codon optimized α-glucuronidase gene was cloned into pQE-30 vector, overexpressed in E. coli BL21 (DE3), and purified with nickel affinity chromatography. The biochemical characterization of the purified α-glucuronidase revealed that the enzyme has activity at elevated temperatures between 65-90 °C. Additionally, Geobacillus kaustophilus α-glucuronidase enzyme showed higher activity at acidic pH values from pH 4.0 to 6.5. This is the first study to report the gene cloning, recombinant expression and biochemical characterization of α-glucuronidase which could be used as accessory enzyme from a thermophilic bacterium Geobacillus kaustophilus.

Anahtar Kelimeler

Kaynakça

  1. Aalbers F, Turkenburg JP, Davies GJ, Dijkhuizen L, Lammerts van Bueren A. 2015. Structural and functional characterization of a novel family GH115 4-O-methyl-α-glucuronidase with specificity for decorated arabinogalactans. J Mol Biol, 427(24): 3935-3946.
  2. Adıgüzel AO. 2013. Biyoetanolün genel özellikleri ve üretimi için gerekli hammadde kaynakları. Bitlis Eren Üniv Fen Bil Derg, 2(2): 204-220.
  3. Akkaya A, Ensari Y, Ozseker EE, Batur OO, Buyuran G, Evran S. 2023. Recombinant production and biochemical characterization of thermostable arabinofuranosidase from acidothermophilic alicyclobacillus acidocaldarius. Protein J, 42(4): 437-450.
  4. Arevalo-Gallegos A, Ahmad Z, Asgher M, Parra-Saldivar R, Iqbal HMN. 2017. Lignocellulose: A sustainable material to produce value-added products with a zero waste approach-A review. Int J Biol Macromol, 99: 308-318.
  5. Chimphango AFA, Görgens JF, van Zyl WH. 2016. In situ enzyme aided adsorption of soluble xylan biopolymers onto cellulosic material. Carbohydr Polym, 143: 172-178.
  6. Chong SL, Derba-Maceluch M, Koutaniemi S, Gómez LD, McQueen-Mason SJ, Tenkanen M, Mellerowicz EJ. 2015. Active fungal GH115 α-glucuronidase produced in Arabidopsis thaliana affects only the UX1-reactive glucuronate decorations on native glucuronoxylans. BMC Biotechnol, 15(1): 56.
  7. Dalia S, Gali G, Gil S, Yuval S. 2004. Effect of dimer dissociation on activity and thermostability of the α-glucuronidase from geobacillus stearothermophilus: Dissecting the different oligomeric forms of family 67 glycoside hydrolases. J Bacteriol, 186(20): 6928-6937.
  8. Demirjian DC, Morís-Varas F, Cassidy CS. 2001. Enzymes from extremophiles. Curr Opin Chem Biol, 5(2): 144-151.

Ayrıntılar

Birincil Dil

İngilizce

Konular

Biyokataliz ve Enzim Teknolojisi

Bölüm

Araştırma Makalesi

Erken Görünüm Tarihi

17 Şubat 2024

Yayımlanma Tarihi

15 Mart 2024

Gönderilme Tarihi

19 Aralık 2023

Kabul Tarihi

15 Ocak 2024

Yayımlandığı Sayı

Yıl 2024 Cilt: 7 Sayı: 2

Kaynak Göster

APA
Taşdemir, H., & Ensari, Y. (2024). Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus. Black Sea Journal of Engineering and Science, 7(2), 175-183. https://doi.org/10.34248/bsengineering.1407030
AMA
1.Taşdemir H, Ensari Y. Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus. BSJ Eng. Sci. 2024;7(2):175-183. doi:10.34248/bsengineering.1407030
Chicago
Taşdemir, Hilal, ve Yunus Ensari. 2024. “Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus”. Black Sea Journal of Engineering and Science 7 (2): 175-83. https://doi.org/10.34248/bsengineering.1407030.
EndNote
Taşdemir H, Ensari Y (01 Mart 2024) Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus. Black Sea Journal of Engineering and Science 7 2 175–183.
IEEE
[1]H. Taşdemir ve Y. Ensari, “Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus”, BSJ Eng. Sci., c. 7, sy 2, ss. 175–183, Mar. 2024, doi: 10.34248/bsengineering.1407030.
ISNAD
Taşdemir, Hilal - Ensari, Yunus. “Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus”. Black Sea Journal of Engineering and Science 7/2 (01 Mart 2024): 175-183. https://doi.org/10.34248/bsengineering.1407030.
JAMA
1.Taşdemir H, Ensari Y. Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus. BSJ Eng. Sci. 2024;7:175–183.
MLA
Taşdemir, Hilal, ve Yunus Ensari. “Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus”. Black Sea Journal of Engineering and Science, c. 7, sy 2, Mart 2024, ss. 175-83, doi:10.34248/bsengineering.1407030.
Vancouver
1.Hilal Taşdemir, Yunus Ensari. Expression and Characterization of a Thermostable α-Glucuronidase from Geobacillus kaustophilus. BSJ Eng. Sci. 01 Mart 2024;7(2):175-83. doi:10.34248/bsengineering.1407030

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