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Biodiversity of Actinobacteria from Kula Geopark in Türkiye
Öz
Investigating the microbial diversity of Actinobacteria inhabiting the soils of the Kula-Salihli Geopark and identifying species at the genus level using 16S rRNA gene sequences are the primary goals of this work. In the literature review of this geopark located within the borders of Manisa province, no study on actinobacterial biodiversity was found. In this study, 10 different selective isolation media were used to investigate the biodiversity of Actinobacteria in the Geopark. A total of 469 Actinobacteria strains were isolated using the dilution-plate method. From these 469 strains, 34 strains were selected based on their colony morphology and pigmentation characteristics. The isolates performed phylogenetic analysis based on sequencing of the 16S ribosomal RNA gene region. The isolates were found to belong to nine different genera, including Actinomadura, Amycolatopsis, Kribbella, Micromonospora, Nocardia, Nonomuraea, Pseudonocardia, Saccharothrix and Streptomyces, according to the results of phylogenetic analysis. Five isolates have been identified as novel species as a consequence of our current study.
Anahtar Kelimeler
Destekleyen Kurum
Scientific Research Projects Coordination Unit (BAPKOB)
Proje Numarası
PYO.FEN.1904.23.008
Etik Beyan
Ethics committee approval was not required for this study because of there was no study on animals or humans. The authors confirm that the ethical policies of the journal, as noted on the journal's author guidelines page, have been adhered to.
Teşekkür
This study was supported by Ondokuz Mayıs University Scientific Research Projects Coordination Unit (BAPKOB) under the project number PYO.FEN.1904.23.008.
Kaynakça
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- Buchholz-Cleven BEE, Rattunde B, Straub KL. 1997. Screening for genetic diversity of isolates of anaerobic Fe(II)-oxidizing bacteria using DGGE and whole-cell hybridization. Syst Appl Microbiol, 20(2): 301-309.
- Chun J, Goodfellow MA. 1995. Phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences. Int J Syst Bacteriol, 45(2): 240-245.
- Faddetta T, Polito G, Abbate L, Alibrandi P, Zerbo M, Caldiero C, Reina C, Puccio G, Vaccaro E, Abenavoli MR, Cavalieri V, Mercati F, Piccionello AP, Gallo G. 2023. Bioactive metabolite survey of Actinobacteria showing plant growth promoting traits to develop novel biofertilizers. Metabolites, 13(3): 374.
- Felsenstein J. 1985. Phylogenies and the comparative method. Am Nat, 125(1): 1-15.
- Hayakawa M, Nonomura H. 1987. Humic acid-vitamin agar, a new medium for the selective isolation of soil actinomycetes. J Ferment Technol, 65(5): 501-509.
- Hickey RJ, Tresner HD. 1952. A cobalt-containing medium for sporulation of Streptomyces species. J Bacteriol, 64(6): 891.
- Hui MLY, Tan LTH, Letchumanan V, He YW, Fang CM, Chan KG, Law JWF, Lee LH. 2021. The extremophilic actinobacteria: From microbes to medicine. Antibiotics, 10(6): 682.
Ayrıntılar
Birincil Dil
İngilizce
Konular
Bakteriyoloji
Bölüm
Araştırma Makalesi
Yayımlanma Tarihi
15 Mayıs 2024
Gönderilme Tarihi
27 Mart 2024
Kabul Tarihi
29 Nisan 2024
Yayımlandığı Sayı
Yıl 2024 Cilt: 7 Sayı: 3
APA
Bayraktar, B., & Işık, K. (2024). Biodiversity of Actinobacteria from Kula Geopark in Türkiye. Black Sea Journal of Engineering and Science, 7(3), 495-508. https://doi.org/10.34248/bsengineering.1459935
AMA
1.Bayraktar B, Işık K. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 2024;7(3):495-508. doi:10.34248/bsengineering.1459935
Chicago
Bayraktar, Betül, ve Kamil Işık. 2024. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science 7 (3): 495-508. https://doi.org/10.34248/bsengineering.1459935.
EndNote
Bayraktar B, Işık K (01 Mayıs 2024) Biodiversity of Actinobacteria from Kula Geopark in Türkiye. Black Sea Journal of Engineering and Science 7 3 495–508.
IEEE
[1]B. Bayraktar ve K. Işık, “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”, BSJ Eng. Sci., c. 7, sy 3, ss. 495–508, May. 2024, doi: 10.34248/bsengineering.1459935.
ISNAD
Bayraktar, Betül - Işık, Kamil. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science 7/3 (01 Mayıs 2024): 495-508. https://doi.org/10.34248/bsengineering.1459935.
JAMA
1.Bayraktar B, Işık K. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 2024;7:495–508.
MLA
Bayraktar, Betül, ve Kamil Işık. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science, c. 7, sy 3, Mayıs 2024, ss. 495-08, doi:10.34248/bsengineering.1459935.
Vancouver
1.Betül Bayraktar, Kamil Işık. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 01 Mayıs 2024;7(3):495-508. doi:10.34248/bsengineering.1459935
Cited By
Taxonomic characterization and secondary metabolite production of newly isolated Streptomyces sp. MC12
International Journal of Secondary Metabolite
https://doi.org/10.21448/ijsm.1481362Determination of Plant Growth Promotion and Antimicrobial Activity Potential of Identified Actinobacteria from Kula Geopark
Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi
https://doi.org/10.18016/ksutarimdoga.vi.1700158