Araştırma Makalesi

Biodiversity of Actinobacteria from Kula Geopark in Türkiye

Cilt: 7 Sayı: 3 15 Mayıs 2024
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Biodiversity of Actinobacteria from Kula Geopark in Türkiye

Öz

Investigating the microbial diversity of Actinobacteria inhabiting the soils of the Kula-Salihli Geopark and identifying species at the genus level using 16S rRNA gene sequences are the primary goals of this work. In the literature review of this geopark located within the borders of Manisa province, no study on actinobacterial biodiversity was found. In this study, 10 different selective isolation media were used to investigate the biodiversity of Actinobacteria in the Geopark. A total of 469 Actinobacteria strains were isolated using the dilution-plate method. From these 469 strains, 34 strains were selected based on their colony morphology and pigmentation characteristics. The isolates performed phylogenetic analysis based on sequencing of the 16S ribosomal RNA gene region. The isolates were found to belong to nine different genera, including Actinomadura, Amycolatopsis, Kribbella, Micromonospora, Nocardia, Nonomuraea, Pseudonocardia, Saccharothrix and Streptomyces, according to the results of phylogenetic analysis. Five isolates have been identified as novel species as a consequence of our current study.

Anahtar Kelimeler

Destekleyen Kurum

Scientific Research Projects Coordination Unit (BAPKOB)

Proje Numarası

PYO.FEN.1904.23.008

Etik Beyan

Ethics committee approval was not required for this study because of there was no study on animals or humans. The authors confirm that the ethical policies of the journal, as noted on the journal's author guidelines page, have been adhered to.

Teşekkür

This study was supported by Ondokuz Mayıs University Scientific Research Projects Coordination Unit (BAPKOB) under the project number PYO.FEN.1904.23.008.

Kaynakça

  1. Barka EA, Vatsa P, Sanchez L, Gaveau-Vaillant N, Jacquard C, Klenk HP, Meier-Kolthoff JP, Clément C, Ouhdouch Y, van Wezel GP. 2016. Taxonomy, physiology, and natural products of Actinobacteria. Microbiol Mol Biol Rev, 80(1): 1-43.
  2. Buchholz-Cleven BEE, Rattunde B, Straub KL. 1997. Screening for genetic diversity of isolates of anaerobic Fe(II)-oxidizing bacteria using DGGE and whole-cell hybridization. Syst Appl Microbiol, 20(2): 301-309.
  3. Chun J, Goodfellow MA. 1995. Phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences. Int J Syst Bacteriol, 45(2): 240-245.
  4. Faddetta T, Polito G, Abbate L, Alibrandi P, Zerbo M, Caldiero C, Reina C, Puccio G, Vaccaro E, Abenavoli MR, Cavalieri V, Mercati F, Piccionello AP, Gallo G. 2023. Bioactive metabolite survey of Actinobacteria showing plant growth promoting traits to develop novel biofertilizers. Metabolites, 13(3): 374.
  5. Felsenstein J. 1985. Phylogenies and the comparative method. Am Nat, 125(1): 1-15.
  6. Hayakawa M, Nonomura H. 1987. Humic acid-vitamin agar, a new medium for the selective isolation of soil actinomycetes. J Ferment Technol, 65(5): 501-509.
  7. Hickey RJ, Tresner HD. 1952. A cobalt-containing medium for sporulation of Streptomyces species. J Bacteriol, 64(6): 891.
  8. Hui MLY, Tan LTH, Letchumanan V, He YW, Fang CM, Chan KG, Law JWF, Lee LH. 2021. The extremophilic actinobacteria: From microbes to medicine. Antibiotics, 10(6): 682.

Ayrıntılar

Birincil Dil

İngilizce

Konular

Bakteriyoloji

Bölüm

Araştırma Makalesi

Yayımlanma Tarihi

15 Mayıs 2024

Gönderilme Tarihi

27 Mart 2024

Kabul Tarihi

29 Nisan 2024

Yayımlandığı Sayı

Yıl 2024 Cilt: 7 Sayı: 3

Kaynak Göster

APA
Bayraktar, B., & Işık, K. (2024). Biodiversity of Actinobacteria from Kula Geopark in Türkiye. Black Sea Journal of Engineering and Science, 7(3), 495-508. https://doi.org/10.34248/bsengineering.1459935
AMA
1.Bayraktar B, Işık K. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 2024;7(3):495-508. doi:10.34248/bsengineering.1459935
Chicago
Bayraktar, Betül, ve Kamil Işık. 2024. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science 7 (3): 495-508. https://doi.org/10.34248/bsengineering.1459935.
EndNote
Bayraktar B, Işık K (01 Mayıs 2024) Biodiversity of Actinobacteria from Kula Geopark in Türkiye. Black Sea Journal of Engineering and Science 7 3 495–508.
IEEE
[1]B. Bayraktar ve K. Işık, “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”, BSJ Eng. Sci., c. 7, sy 3, ss. 495–508, May. 2024, doi: 10.34248/bsengineering.1459935.
ISNAD
Bayraktar, Betül - Işık, Kamil. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science 7/3 (01 Mayıs 2024): 495-508. https://doi.org/10.34248/bsengineering.1459935.
JAMA
1.Bayraktar B, Işık K. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 2024;7:495–508.
MLA
Bayraktar, Betül, ve Kamil Işık. “Biodiversity of Actinobacteria from Kula Geopark in Türkiye”. Black Sea Journal of Engineering and Science, c. 7, sy 3, Mayıs 2024, ss. 495-08, doi:10.34248/bsengineering.1459935.
Vancouver
1.Betül Bayraktar, Kamil Işık. Biodiversity of Actinobacteria from Kula Geopark in Türkiye. BSJ Eng. Sci. 01 Mayıs 2024;7(3):495-508. doi:10.34248/bsengineering.1459935

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