Araştırma Makalesi
BibTex RIS Kaynak Göster

INVESTIGATING THE EFFECTS OF GLUCOSE, GLUTAMINE, AND 5-FLUORODEOXYURIDINE (FUDR) ON CILIA LENGTH AND INTRAFLAGELLAR TRANSPORT DYNAMICS IN Caenorhabditis elegans

Yıl 2026, Cilt: 15 Sayı: 1, 66 - 73, 27.01.2026
https://doi.org/10.18036/estubtdc.1752497

Öz

Cilia are sensory cellular organelles essential for development, signaling, and homeostasis, with dysfunction leading to a broad spectrum of diseases collectively termed ciliopathies. Intraflagellar transport (IFT), a bidirectional process critical for cilia assembly and maintenance, is regulated by kinesin and dynein motors and influenced by metabolic states. This study aimed to examine the effects of 5-fluorodeoxyuridine (FUDR), glucose, and glutamine on ciliogenesis, including ciliary length and IFT dynamics in the sensory neurons in Caenorhabditis elegans. C. elegans were treated with glucose, glutamine, or FUDR. Morphological changes in cilia were investigated using fluorescence microscopy, and IFT dynamics, including localization, IFT particle frequency, and IFT speed, were measured in worms through time-lapse imaging of fluorescently labeled IFT proteins in PHA/PHB neurons. Quantitative analyses were conducted for all treatment groups. Glucose significantly shortened cilia and altered IFT, including mid-ciliary accumulation and a slight reduction in anterograde IFT frequency. On the other hand, glutamine treatment only increased cilia length but did not interfere with IFT, whereas FUDR had little effect on both. Our results highlight the role of nutrient availability as a factor responsible for the modulation of cilia length and IFT dynamics.

Etik Beyan

I am writing to declare that our manuscript entitled “Investigating the Effects of Glucose, Glutamine, and 5-Fluorodeoxyuridine (FUDR) on Cilia Length and Intraflagellar Transport Dynamics in Caenorhabditis elegans” does not require any Ethics Committee approval.

Destekleyen Kurum

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Teşekkür

-

Kaynakça

  • [1] Turan MG, Orhan ME, Cevik S, Kaplan OI. CiliaMiner: an integrated database for ciliopathy genes and ciliopathies. Database (Oxford) Jul 26; 2023:baad047.
  • [2] Blacque OE, Cevik S, Kaplan OI. Intraflagellar transport: from molecular characterisation to mechanism. Front Biosci, 2008; Jan 1; 13:2633-52.
  • [3] Prevo B, Scholey JM, Peterman EJG. Intraflagellar transport: mechanisms of motor action, cooperation, and cargo delivery. FEBS J. 2017; Sep; 284(18):2905-2931.
  • [4] Steidl ME, Nigro EA, Nielsen AK, Pagliarini R, Cassina L, Lampis M, Podrini C, Chiaravalli M, Mannella V, Distefano G, et al. Primary cilia sense glutamine availability and respond via asparagine synthetase. Nat Metab, 2023; 5, 385–397.
  • [5] Ou G, Koga M, Blacque OE, Murayama T, Ohshima Y, Schafer JC, Li C, Yoder BK, Leroux MR. Sensory ciliogenesis in Caenorhabditis elegans: assignment of IFT components into distinct modules based on transport and phenotypic profiles. Mol Biol Cell, 2007; May; 18(5):1554-69.
  • [6] Yi P, Li WJ, Dong MQ, Ou G. Dynein-Driven Retrograde Intraflagellar Transport Is Triphasic in C. elegans Sensory Cilia. Curr Biol, 2017; May 22; 27(10):1448-1461.e7.
  • [7] Cevik S, Peng X, Beyer T, Pir MS, Yenisert F, Woerz F, Hoffmann F, Altunkaynak B, Pir B, Boldt K, et.al. WDR31 displays functional redundancy with GTPase-activating proteins (GAPs) ELMOD and RP2 in regulating IFT complex and recruiting the BBSome to cilium. Life Sci Alliance, 2023; May 19;6(8):e202201844.
  • [8] Schneider C, Rasband W & Eliceiri K. NIH Image to ImageJ: 25 years of image analysis. Nat Methods, 2012; 9, 671–675.
  • [9] Mangeol P, Prevo B & Peterman EJG. KymographClear and KymographDirect: two tools for the automated quantitative analysis of molecular and cellular dynamics using kymographs. Molecular Biology of the Cell, 2016; 27(12), 1948–1957.
  • [10] Turan MG, Kantarci H, Temtek SD, Cakici O, Cevik S, Kaplan OI. Protocol for determining the average speed and frequency of kinesin and dynein-driven intraflagellar transport (IFT) in C. elegans. STAR Protoc, 2022; Sep 16; 3(3):101498.
  • [11] Takahashi K, Nagai T, Chiba S, Nakayama K, Mizuno K. Glucose deprivation induces primary cilium formation through mTORC1 inactivation. J Cell Sci. 2018; Jan 8;131(1).
  • [12] Tian JL, Huang CW, Eslami F, Mannino MP, Mai RL, Hart GW. Regulation of Primary Cilium Length by O-GlcNAc during Neuronal Development in a Human Neuron Model. Cells, 2023; May 31;12(11):1520.

INVESTIGATING THE EFFECTS OF GLUCOSE, GLUTAMINE, AND 5-FLUORODEOXYURIDINE (FUDR) ON CILIA LENGTH AND INTRAFLAGELLAR TRANSPORT DYNAMICS IN Caenorhabditis elegans

Yıl 2026, Cilt: 15 Sayı: 1, 66 - 73, 27.01.2026
https://doi.org/10.18036/estubtdc.1752497

Öz

Cilia are sensory cellular organelles essential for development, signaling, and homeostasis, with dysfunction leading to a broad spectrum of diseases collectively termed ciliopathies. Intraflagellar transport (IFT), a bidirectional process critical for cilia assembly and maintenance, is regulated by kinesin and dynein motors and influenced by metabolic states. This study aimed to examine the effects of 5-fluorodeoxyuridine (FUDR), glucose, and glutamine on ciliogenesis, including ciliary length and IFT dynamics in the sensory neurons in Caenorhabditis elegans. C. elegans were treated with glucose, glutamine, or FUDR. Morphological changes in cilia were investigated using fluorescence microscopy, and IFT dynamics, including localization, IFT particle frequency, and IFT speed, were measured in worms through time-lapse imaging of fluorescently labeled IFT proteins in PHA/PHB neurons. Quantitative analyses were conducted for all treatment groups. Glucose significantly shortened cilia and altered IFT, including mid-ciliary accumulation and a slight reduction in anterograde IFT frequency. On the other hand, glutamine treatment only increased cilia length but did not interfere with IFT, whereas FUDR had little effect on both. Our results highlight the role of nutrient availability as a factor responsible for the modulation of cilia length and IFT dynamics.

Kaynakça

  • [1] Turan MG, Orhan ME, Cevik S, Kaplan OI. CiliaMiner: an integrated database for ciliopathy genes and ciliopathies. Database (Oxford) Jul 26; 2023:baad047.
  • [2] Blacque OE, Cevik S, Kaplan OI. Intraflagellar transport: from molecular characterisation to mechanism. Front Biosci, 2008; Jan 1; 13:2633-52.
  • [3] Prevo B, Scholey JM, Peterman EJG. Intraflagellar transport: mechanisms of motor action, cooperation, and cargo delivery. FEBS J. 2017; Sep; 284(18):2905-2931.
  • [4] Steidl ME, Nigro EA, Nielsen AK, Pagliarini R, Cassina L, Lampis M, Podrini C, Chiaravalli M, Mannella V, Distefano G, et al. Primary cilia sense glutamine availability and respond via asparagine synthetase. Nat Metab, 2023; 5, 385–397.
  • [5] Ou G, Koga M, Blacque OE, Murayama T, Ohshima Y, Schafer JC, Li C, Yoder BK, Leroux MR. Sensory ciliogenesis in Caenorhabditis elegans: assignment of IFT components into distinct modules based on transport and phenotypic profiles. Mol Biol Cell, 2007; May; 18(5):1554-69.
  • [6] Yi P, Li WJ, Dong MQ, Ou G. Dynein-Driven Retrograde Intraflagellar Transport Is Triphasic in C. elegans Sensory Cilia. Curr Biol, 2017; May 22; 27(10):1448-1461.e7.
  • [7] Cevik S, Peng X, Beyer T, Pir MS, Yenisert F, Woerz F, Hoffmann F, Altunkaynak B, Pir B, Boldt K, et.al. WDR31 displays functional redundancy with GTPase-activating proteins (GAPs) ELMOD and RP2 in regulating IFT complex and recruiting the BBSome to cilium. Life Sci Alliance, 2023; May 19;6(8):e202201844.
  • [8] Schneider C, Rasband W & Eliceiri K. NIH Image to ImageJ: 25 years of image analysis. Nat Methods, 2012; 9, 671–675.
  • [9] Mangeol P, Prevo B & Peterman EJG. KymographClear and KymographDirect: two tools for the automated quantitative analysis of molecular and cellular dynamics using kymographs. Molecular Biology of the Cell, 2016; 27(12), 1948–1957.
  • [10] Turan MG, Kantarci H, Temtek SD, Cakici O, Cevik S, Kaplan OI. Protocol for determining the average speed and frequency of kinesin and dynein-driven intraflagellar transport (IFT) in C. elegans. STAR Protoc, 2022; Sep 16; 3(3):101498.
  • [11] Takahashi K, Nagai T, Chiba S, Nakayama K, Mizuno K. Glucose deprivation induces primary cilium formation through mTORC1 inactivation. J Cell Sci. 2018; Jan 8;131(1).
  • [12] Tian JL, Huang CW, Eslami F, Mannino MP, Mai RL, Hart GW. Regulation of Primary Cilium Length by O-GlcNAc during Neuronal Development in a Human Neuron Model. Cells, 2023; May 31;12(11):1520.
Toplam 12 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Nörogenetik
Bölüm Araştırma Makalesi
Yazarlar

Sebiha Cevik 0000-0002-0935-1929

Gönderilme Tarihi 28 Temmuz 2025
Kabul Tarihi 6 Kasım 2025
Yayımlanma Tarihi 27 Ocak 2026
Yayımlandığı Sayı Yıl 2026 Cilt: 15 Sayı: 1

Kaynak Göster

AMA Cevik S. INVESTIGATING THE EFFECTS OF GLUCOSE, GLUTAMINE, AND 5-FLUORODEOXYURIDINE (FUDR) ON CILIA LENGTH AND INTRAFLAGELLAR TRANSPORT DYNAMICS IN Caenorhabditis elegans. Estuscience - Life. Ocak 2026;15(1):66-73. doi:10.18036/estubtdc.1752497